Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11j08
(813 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069312-1|AAL39457.1| 283|Drosophila melanogaster LD02616p pro... 119 5e-27
AE014298-1933|AAF48295.2| 283|Drosophila melanogaster CG11176-P... 119 5e-27
AY119601-1|AAM50255.1| 658|Drosophila melanogaster LD22095p pro... 29 5.7
AY069804-1|AAL39949.1| 2555|Drosophila melanogaster SD04476p pro... 29 5.7
AF032870-1|AAC38820.1| 2559|Drosophila melanogaster Shar pei/DRh... 29 5.7
AF031930-1|AAB88816.1| 2559|Drosophila melanogaster putative gua... 29 5.7
AE013599-2404|AAF57915.2| 2205|Drosophila melanogaster CG9635-PE... 29 5.7
AE013599-2403|AAM68490.2| 2559|Drosophila melanogaster CG9635-PF... 29 5.7
AE013599-2402|AAM68489.1| 2559|Drosophila melanogaster CG9635-PD... 29 5.7
AE013599-748|AAF59018.2| 1241|Drosophila melanogaster CG8232-PA ... 29 5.7
AY058602-1|AAL13831.1| 1257|Drosophila melanogaster LD29335p pro... 29 7.6
AE013599-965|AAF58877.2| 1877|Drosophila melanogaster CG30007-PA... 29 7.6
AY089289-1|AAL90027.1| 278|Drosophila melanogaster AT08432p pro... 29 10.0
AF467953-1|AAL76078.1| 426|Drosophila melanogaster histamine-ga... 29 10.0
AE014296-602|AAF47740.1| 2272|Drosophila melanogaster CG14967-PA... 29 10.0
AE013599-1591|AAF58451.1| 291|Drosophila melanogaster CG17575-P... 29 10.0
>AY069312-1|AAL39457.1| 283|Drosophila melanogaster LD02616p
protein.
Length = 283
Score = 119 bits (286), Expect = 5e-27
Identities = 79/246 (32%), Positives = 127/246 (51%), Gaps = 9/246 (3%)
Frame = -1
Query: 780 YSLIVATNRDEFYDRPSAELAPWKDNPNIIXXXXXXXXXXXGTWLAVSPLRK--KMGVLL 607
Y LI+A+NRDEF+ R + A W + ++ GTWLA+ K+G LL
Sbjct: 17 YKLILASNRDEFFARATLSAAKWANADHVYGGIDLEPGREGGTWLAIGHSAGFFKVGALL 76
Query: 606 NLPNTPK-KNAKSRGKIVAEFVKSKNEAASYVQEMKSYFEECNN---FIFVAMDFGNTT- 442
NL PK ++A RG IVA++V +E S + + ++C F FV+++ G+ +
Sbjct: 77 NLTGEPKPRDAVGRGMIVADYVTRADEEHSILNYNERLLKDCTKYSAFNFVSIEIGSASQ 136
Query: 441 PV-INSFTNVTNSITTHTD-PCLGFGNSLPDMPLKKVEAGLTKMHDICKGLNKISMKSKL 268
P + +NV ++ + C GFGNSLP P +KV G + I K + S+++ L
Sbjct: 137 PARVKLLSNVPPTLEDFQNGECYGFGNSLPHSPFEKVRHGKQEFEAIVKAHGEASVET-L 195
Query: 267 LEELTALLKCNERHLPDAQLQERRPNLYEELSSIFVCVPEERYGTRAQTILLLTKTGHLE 88
+L LL+ + PD +L+ R PN E LSS+ V + E YG+R +++L+ +
Sbjct: 196 SAQLMQLLRNKHKFWPDDELKTRAPNWGEGLSSLNVHIEEHAYGSRTHSVVLVDSENKMH 255
Query: 87 VHEISM 70
E +M
Sbjct: 256 FIEETM 261
>AE014298-1933|AAF48295.2| 283|Drosophila melanogaster CG11176-PA
protein.
Length = 283
Score = 119 bits (286), Expect = 5e-27
Identities = 79/246 (32%), Positives = 127/246 (51%), Gaps = 9/246 (3%)
Frame = -1
Query: 780 YSLIVATNRDEFYDRPSAELAPWKDNPNIIXXXXXXXXXXXGTWLAVSPLRK--KMGVLL 607
Y LI+A+NRDEF+ R + A W + ++ GTWLA+ K+G LL
Sbjct: 17 YKLILASNRDEFFARATLSAAKWANADHVYGGIDLEPGREGGTWLAIGHSAGFFKVGALL 76
Query: 606 NLPNTPK-KNAKSRGKIVAEFVKSKNEAASYVQEMKSYFEECNN---FIFVAMDFGNTT- 442
NL PK ++A RG IVA++V +E S + + ++C F FV+++ G+ +
Sbjct: 77 NLTGEPKPRDAVGRGMIVADYVTRADEEHSILNYNERLLKDCTKYSAFNFVSIEIGSASQ 136
Query: 441 PV-INSFTNVTNSITTHTD-PCLGFGNSLPDMPLKKVEAGLTKMHDICKGLNKISMKSKL 268
P + +NV ++ + C GFGNSLP P +KV G + I K + S+++ L
Sbjct: 137 PARVKLLSNVPPTLEDFQNGECYGFGNSLPHSPFEKVRHGKQEFEAIVKAHGEASVET-L 195
Query: 267 LEELTALLKCNERHLPDAQLQERRPNLYEELSSIFVCVPEERYGTRAQTILLLTKTGHLE 88
+L LL+ + PD +L+ R PN E LSS+ V + E YG+R +++L+ +
Sbjct: 196 SAQLMQLLRNKHKFWPDDELKTRAPNWGEGLSSLNVHIEEHAYGSRTHSVVLVDSENKMH 255
Query: 87 VHEISM 70
E +M
Sbjct: 256 FIEETM 261
>AY119601-1|AAM50255.1| 658|Drosophila melanogaster LD22095p
protein.
Length = 658
Score = 29.5 bits (63), Expect = 5.7
Identities = 21/98 (21%), Positives = 42/98 (42%)
Frame = -1
Query: 495 FEECNNFIFVAMDFGNTTPVINSFTNVTNSITTHTDPCLGFGNSLPDMPLKKVEAGLTKM 316
F++ +++ G+ T + S H + ++L L + L
Sbjct: 69 FDDYEELLWMGNQGGHVTSYYTNSMQKYTSFQVHATDIVRDISTLDSGVLALTQTSLR-- 126
Query: 315 HDICKGLNKISMKSKLLEELTALLKCNERHLPDAQLQE 202
H I +GL K + KS ++E+ ++L+ + L A LQ+
Sbjct: 127 HQIRRGLPKFTFKSNNMKEMVSMLQLSPHRLVMAGLQD 164
>AY069804-1|AAL39949.1| 2555|Drosophila melanogaster SD04476p protein.
Length = 2555
Score = 29.5 bits (63), Expect = 5.7
Identities = 51/185 (27%), Positives = 77/185 (41%), Gaps = 13/185 (7%)
Frame = -1
Query: 564 KIVAEFVKSKNEAASYVQEMKSYFEEC----NNFIFVAMDFGNTTPVINSFTNVTNSITT 397
K VA+ SKNEAA+ V E+ S E N VA + I T +T
Sbjct: 2340 KEVADPTTSKNEAAASVDELPSQSREIKTAENASKSVADKKEDNEETIEEGVASTVDSST 2399
Query: 396 HTDPC--------LGFGNSLPDMPLKKVEAGLTKMHDICKGLNKISMKSKLLEELTALL- 244
T P L G+S P + A + + C L+ S+ + L E+++ LL
Sbjct: 2400 QTSPTESPKETDKLTGGSSSTCGPNRIQHASVLEPSVPCHALS--SIVTILNEQISMLLP 2457
Query: 243 KCNERHLPDAQLQERRPNLYEELSSIFVCVPEERYGTRAQTILLLTKTGHLEVHEISMKS 64
K NER + +L++ +L E LS++ +R +T L K H E ++
Sbjct: 2458 KINERDMERERLRKENQHLRELLSALH---DRQRVDEVKETPFDLKKLMHAE--DVEFDD 2512
Query: 63 PIDKI 49
ID I
Sbjct: 2513 DIDAI 2517
>AF032870-1|AAC38820.1| 2559|Drosophila melanogaster Shar pei/DRhoGEF2
protein.
Length = 2559
Score = 29.5 bits (63), Expect = 5.7
Identities = 51/185 (27%), Positives = 77/185 (41%), Gaps = 13/185 (7%)
Frame = -1
Query: 564 KIVAEFVKSKNEAASYVQEMKSYFEEC----NNFIFVAMDFGNTTPVINSFTNVTNSITT 397
K VA+ SKNEAA+ V E+ S E N VA + I T +T
Sbjct: 2344 KEVADPTTSKNEAAASVDELPSQSREIKTAENASKSVADKKEDNEETIEEGVASTVDSST 2403
Query: 396 HTDPC--------LGFGNSLPDMPLKKVEAGLTKMHDICKGLNKISMKSKLLEELTALL- 244
T P L G+S P + A + + C L+ S+ + L E+++ LL
Sbjct: 2404 QTSPTESPKETDKLTGGSSSTCGPNRIQHASVLEPSVPCHALS--SIVTILNEQISMLLP 2461
Query: 243 KCNERHLPDAQLQERRPNLYEELSSIFVCVPEERYGTRAQTILLLTKTGHLEVHEISMKS 64
K NER + +L++ +L E LS++ +R +T L K H E ++
Sbjct: 2462 KINERDMERERLRKENQHLRELLSALH---DRQRVDEVKETPFDLKKLMHAE--DVEFDD 2516
Query: 63 PIDKI 49
ID I
Sbjct: 2517 DIDAI 2521
>AF031930-1|AAB88816.1| 2559|Drosophila melanogaster putative guanine
nucleotide exchangefactor RhoGEF2 protein.
Length = 2559
Score = 29.5 bits (63), Expect = 5.7
Identities = 51/185 (27%), Positives = 77/185 (41%), Gaps = 13/185 (7%)
Frame = -1
Query: 564 KIVAEFVKSKNEAASYVQEMKSYFEEC----NNFIFVAMDFGNTTPVINSFTNVTNSITT 397
K VA+ SKNEAA+ V E+ S E N VA + I T +T
Sbjct: 2344 KEVADPTTSKNEAAASVDELPSQSREIKTAENASKSVADKKEDNEETIEEGVASTVDSST 2403
Query: 396 HTDPC--------LGFGNSLPDMPLKKVEAGLTKMHDICKGLNKISMKSKLLEELTALL- 244
T P L G+S P + A + + C L+ S+ + L E+++ LL
Sbjct: 2404 QTSPTESPKETDKLTGGSSSTCGPNRIQHASVLEPSVPCHALS--SIVTILNEQISMLLP 2461
Query: 243 KCNERHLPDAQLQERRPNLYEELSSIFVCVPEERYGTRAQTILLLTKTGHLEVHEISMKS 64
K NER + +L++ +L E LS++ +R +T L K H E ++
Sbjct: 2462 KINERDMERERLRKENQHLRELLSALH---DRQRVDEVKETPFDLKKLMHAE--DVEFDD 2516
Query: 63 PIDKI 49
ID I
Sbjct: 2517 DIDAI 2521
>AE013599-2404|AAF57915.2| 2205|Drosophila melanogaster CG9635-PE,
isoform E protein.
Length = 2205
Score = 29.5 bits (63), Expect = 5.7
Identities = 51/185 (27%), Positives = 77/185 (41%), Gaps = 13/185 (7%)
Frame = -1
Query: 564 KIVAEFVKSKNEAASYVQEMKSYFEEC----NNFIFVAMDFGNTTPVINSFTNVTNSITT 397
K VA+ SKNEAA+ V E+ S E N VA + I T +T
Sbjct: 1990 KEVADPTTSKNEAAASVDELPSQSREIKTAENASKSVADKKEDNEETIEEGVASTVDSST 2049
Query: 396 HTDPC--------LGFGNSLPDMPLKKVEAGLTKMHDICKGLNKISMKSKLLEELTALL- 244
T P L G+S P + A + + C L+ S+ + L E+++ LL
Sbjct: 2050 QTSPTESPKETDKLTGGSSSTCGPNRIQHASVLEPSVPCHALS--SIVTILNEQISMLLP 2107
Query: 243 KCNERHLPDAQLQERRPNLYEELSSIFVCVPEERYGTRAQTILLLTKTGHLEVHEISMKS 64
K NER + +L++ +L E LS++ +R +T L K H E ++
Sbjct: 2108 KINERDMERERLRKENQHLRELLSALH---DRQRVDEVKETPFDLKKLMHAE--DVEFDD 2162
Query: 63 PIDKI 49
ID I
Sbjct: 2163 DIDAI 2167
>AE013599-2403|AAM68490.2| 2559|Drosophila melanogaster CG9635-PF,
isoform F protein.
Length = 2559
Score = 29.5 bits (63), Expect = 5.7
Identities = 51/185 (27%), Positives = 77/185 (41%), Gaps = 13/185 (7%)
Frame = -1
Query: 564 KIVAEFVKSKNEAASYVQEMKSYFEEC----NNFIFVAMDFGNTTPVINSFTNVTNSITT 397
K VA+ SKNEAA+ V E+ S E N VA + I T +T
Sbjct: 2344 KEVADPTTSKNEAAASVDELPSQSREIKTAENASKSVADKKEDNEETIEEGVASTVDSST 2403
Query: 396 HTDPC--------LGFGNSLPDMPLKKVEAGLTKMHDICKGLNKISMKSKLLEELTALL- 244
T P L G+S P + A + + C L+ S+ + L E+++ LL
Sbjct: 2404 QTSPTESPKETDKLTGGSSSTCGPNRIQHASVLEPSVPCHALS--SIVTILNEQISMLLP 2461
Query: 243 KCNERHLPDAQLQERRPNLYEELSSIFVCVPEERYGTRAQTILLLTKTGHLEVHEISMKS 64
K NER + +L++ +L E LS++ +R +T L K H E ++
Sbjct: 2462 KINERDMERERLRKENQHLRELLSALH---DRQRVDEVKETPFDLKKLMHAE--DVEFDD 2516
Query: 63 PIDKI 49
ID I
Sbjct: 2517 DIDAI 2521
>AE013599-2402|AAM68489.1| 2559|Drosophila melanogaster CG9635-PD,
isoform D protein.
Length = 2559
Score = 29.5 bits (63), Expect = 5.7
Identities = 51/185 (27%), Positives = 77/185 (41%), Gaps = 13/185 (7%)
Frame = -1
Query: 564 KIVAEFVKSKNEAASYVQEMKSYFEEC----NNFIFVAMDFGNTTPVINSFTNVTNSITT 397
K VA+ SKNEAA+ V E+ S E N VA + I T +T
Sbjct: 2344 KEVADPTTSKNEAAASVDELPSQSREIKTAENASKSVADKKEDNEETIEEGVASTVDSST 2403
Query: 396 HTDPC--------LGFGNSLPDMPLKKVEAGLTKMHDICKGLNKISMKSKLLEELTALL- 244
T P L G+S P + A + + C L+ S+ + L E+++ LL
Sbjct: 2404 QTSPTESPKETDKLTGGSSSTCGPNRIQHASVLEPSVPCHALS--SIVTILNEQISMLLP 2461
Query: 243 KCNERHLPDAQLQERRPNLYEELSSIFVCVPEERYGTRAQTILLLTKTGHLEVHEISMKS 64
K NER + +L++ +L E LS++ +R +T L K H E ++
Sbjct: 2462 KINERDMERERLRKENQHLRELLSALH---DRQRVDEVKETPFDLKKLMHAE--DVEFDD 2516
Query: 63 PIDKI 49
ID I
Sbjct: 2517 DIDAI 2521
>AE013599-748|AAF59018.2| 1241|Drosophila melanogaster CG8232-PA
protein.
Length = 1241
Score = 29.5 bits (63), Expect = 5.7
Identities = 21/98 (21%), Positives = 42/98 (42%)
Frame = -1
Query: 495 FEECNNFIFVAMDFGNTTPVINSFTNVTNSITTHTDPCLGFGNSLPDMPLKKVEAGLTKM 316
F++ +++ G+ T + S H + ++L L + L
Sbjct: 69 FDDYEELLWMGNQGGHVTSYYTNSMQKYTSFQVHATDIVRDISTLDSGVLALTQTSLR-- 126
Query: 315 HDICKGLNKISMKSKLLEELTALLKCNERHLPDAQLQE 202
H I +GL K + KS ++E+ ++L+ + L A LQ+
Sbjct: 127 HQIRRGLPKFTFKSNNMKEMVSMLQLSPHRLVMAGLQD 164
>AY058602-1|AAL13831.1| 1257|Drosophila melanogaster LD29335p protein.
Length = 1257
Score = 29.1 bits (62), Expect = 7.6
Identities = 21/65 (32%), Positives = 35/65 (53%)
Frame = +2
Query: 107 VRSNIVCALVPYLSSGTQTNIELNSSYKLGLRSCSWASGRCLSLHFKSAVNSSKSLLFIE 286
VR ++ +L PYLSS ++++EL + LG + R H + V+ K +LF+
Sbjct: 1139 VRGPLISSLFPYLSSTLRSDLEL-VLHDLG----EFFYKRSWPAHTDATVDFRKRVLFVF 1193
Query: 287 ILLSP 301
+ LSP
Sbjct: 1194 MNLSP 1198
>AE013599-965|AAF58877.2| 1877|Drosophila melanogaster CG30007-PA,
isoform A protein.
Length = 1877
Score = 29.1 bits (62), Expect = 7.6
Identities = 21/65 (32%), Positives = 35/65 (53%)
Frame = +2
Query: 107 VRSNIVCALVPYLSSGTQTNIELNSSYKLGLRSCSWASGRCLSLHFKSAVNSSKSLLFIE 286
VR ++ +L PYLSS ++++EL + LG + R H + V+ K +LF+
Sbjct: 1759 VRGPLISSLFPYLSSTLRSDLEL-VLHDLG----EFFYKRSWPAHTDATVDFRKRVLFVF 1813
Query: 287 ILLSP 301
+ LSP
Sbjct: 1814 MNLSP 1818
>AY089289-1|AAL90027.1| 278|Drosophila melanogaster AT08432p
protein.
Length = 278
Score = 28.7 bits (61), Expect = 10.0
Identities = 15/69 (21%), Positives = 29/69 (42%)
Frame = -1
Query: 600 PNTPKKNAKSRGKIVAEFVKSKNEAASYVQEMKSYFEECNNFIFVAMDFGNTTPVINSFT 421
P++P I E+ + +++M + ++EC+ +A N + I FT
Sbjct: 131 PSSPSDPPNPEAPIPVEYHTEDEVIKATLEQMFAEYKECSMRDIIAFSPPNNSKCIAYFT 190
Query: 420 NVTNSITTH 394
+ TTH
Sbjct: 191 QLVRDSTTH 199
>AF467953-1|AAL76078.1| 426|Drosophila melanogaster histamine-gated
chloride channelsubunit protein.
Length = 426
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +1
Query: 493 KIRFHFLNI*CSLIFTFHKFCYNFTSAFCIFLWCIW*IQKYSH 621
K+ FH ++I I+ +H + S + LWC + Y H
Sbjct: 149 KVTFHEMSIPNHYIWVYHDKTLFYMSKLTLVLWCALKFESYPH 191
>AE014296-602|AAF47740.1| 2272|Drosophila melanogaster CG14967-PA
protein.
Length = 2272
Score = 28.7 bits (61), Expect = 10.0
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = -1
Query: 306 CKGLNKISMKSKLLEELTALLKCNERHLPDAQLQERRPNLYE 181
C L +S+ KL +E A+ + R L + Q++E+R NLYE
Sbjct: 471 CAELFNVSLLMKLEDEHIAMSVSHTRFLLE-QIEEKRSNLYE 511
>AE013599-1591|AAF58451.1| 291|Drosophila melanogaster CG17575-PA
protein.
Length = 291
Score = 28.7 bits (61), Expect = 10.0
Identities = 15/69 (21%), Positives = 29/69 (42%)
Frame = -1
Query: 600 PNTPKKNAKSRGKIVAEFVKSKNEAASYVQEMKSYFEECNNFIFVAMDFGNTTPVINSFT 421
P++P I E+ + +++M + ++EC+ +A N + I FT
Sbjct: 144 PSSPSDPPNPEAPIPVEYHTEDEVIKATLEQMFAEYKECSMRDIIAFSPPNNSKCIAYFT 203
Query: 420 NVTNSITTH 394
+ TTH
Sbjct: 204 QLVRDSTTH 212
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,179,867
Number of Sequences: 53049
Number of extensions: 721888
Number of successful extensions: 2248
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2241
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3818998872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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