Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11i23
(852 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC067234-1|AAH67234.1| 171|Homo sapiens BPTF protein protein. 38 0.035
BC050566-1|AAH50566.1| 240|Homo sapiens BPTF protein protein. 38 0.035
AY282495-1|AAP22284.1| 2764|Homo sapiens bromodomain PHD finger ... 38 0.035
AB032251-1|BAA89208.1| 2781|Homo sapiens bromodomain PHD finger ... 38 0.035
AL390294-1|CAH73142.1| 929|Homo sapiens TAF3 RNA polymerase II,... 36 0.19
AL353754-1|CAH73451.1| 929|Homo sapiens TAF3 RNA polymerase II,... 36 0.19
AL159172-1|CAI15661.1| 929|Homo sapiens TAF3 RNA polymerase II,... 36 0.19
S78570-1|AAB34770.1| 366|Homo sapiens MLL protein. 34 0.75
L04284-1|AAA58669.1| 3969|Homo sapiens HRX protein. 34 0.75
L01986-1|AAA92511.1| 1012|Homo sapiens trithorax protein. 34 0.75
D14540-1|BAA03407.1| 1909|Homo sapiens MLL protein. 34 0.75
BC015733-1|AAH15733.1| 660|Homo sapiens CXXC1 protein protein. 34 0.75
BC014940-1|AAH14940.1| 656|Homo sapiens CXXC finger 1 (PHD doma... 34 0.75
AY373585-1|AAQ63624.1| 3969|Homo sapiens myeloid/lymphoid or mix... 34 0.75
AF492830-1|AAM33377.1| 182|Homo sapiens CDK6/MLL fusion protein... 34 0.75
AF149758-1|AAF37799.1| 656|Homo sapiens CpG binding protein pro... 34 0.75
AB209508-1|BAD92745.1| 2880|Homo sapiens myeloid/lymphoid or mix... 34 0.75
AB031069-1|BAA96307.1| 656|Homo sapiens protein containing CXXC... 34 0.75
AJ007041-1|CAB45385.1| 2715|Homo sapiens trithorax homologue 2 p... 32 2.3
AF186605-1|AAD56420.1| 2605|Homo sapiens MLL2 protein protein. 32 2.3
AF104918-1|AAD17932.1| 1010|Homo sapiens myeloid/lymphoid leukem... 32 2.3
AB002302-1|BAA20763.3| 2415|Homo sapiens KIAA0304 protein protein. 32 2.3
BC117686-1|AAI17687.1| 1683|Homo sapiens SHPRH protein protein. 31 7.0
AY163808-1|AAO06907.1| 1659|Homo sapiens helicase-like protein p... 31 7.0
AY161136-1|AAO26201.1| 1683|Homo sapiens SNF2 histone linker PHD... 31 7.0
AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein. 31 7.0
AL451145-1|CAH70765.1| 1683|Homo sapiens SNF2 histone linker PHD... 31 7.0
AL356599-2|CAI41120.1| 1683|Homo sapiens SNF2 histone linker PHD... 31 7.0
AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein. 31 7.0
AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein. 31 7.0
AB209494-1|BAD92731.1| 2704|Homo sapiens myeloid/lymphoid or mix... 31 7.0
AB095943-1|BAC23119.1| 1092|Homo sapiens KIAA2023 protein protein. 31 7.0
BC029908-1|AAH29908.1| 160|Homo sapiens TSPAN16 protein protein. 30 9.3
AF133424-1|AAF08363.1| 245|Homo sapiens tetraspanin TM4-B protein. 30 9.3
>BC067234-1|AAH67234.1| 171|Homo sapiens BPTF protein protein.
Length = 171
Score = 38.3 bits (85), Expect = 0.035
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -1
Query: 249 IGCDNCLAWYHLKCTIFSSEDYENVYNKEFVCPTCNN 139
IGCD C WYH +C + E + E+VCP C +
Sbjct: 8 IGCDRCQNWYHGRCVGILQSEAELI--DEYVCPQCQS 42
>BC050566-1|AAH50566.1| 240|Homo sapiens BPTF protein protein.
Length = 240
Score = 38.3 bits (85), Expect = 0.035
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -1
Query: 249 IGCDNCLAWYHLKCTIFSSEDYENVYNKEFVCPTCNN 139
IGCD C WYH +C + E + E+VCP C +
Sbjct: 77 IGCDRCQNWYHGRCVGILQSEAELI--DEYVCPQCQS 111
Score = 30.3 bits (65), Expect = 9.3
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -1
Query: 249 IGCDNCLAWYHLKCTIFSSEDYENVYNKEFVCPTC 145
IGCD C WYH +C + ++ + + ++C C
Sbjct: 19 IGCDLCTNWYHGECVGITEKEAKKM--DVYICNDC 51
>AY282495-1|AAP22284.1| 2764|Homo sapiens bromodomain PHD finger
transcription factor protein.
Length = 2764
Score = 38.3 bits (85), Expect = 0.035
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -1
Query: 249 IGCDNCLAWYHLKCTIFSSEDYENVYNKEFVCPTCNN 139
IGCD C WYH +C + E + E+VCP C +
Sbjct: 2601 IGCDRCQNWYHGRCVGILQSEAELI--DEYVCPQCQS 2635
>AB032251-1|BAA89208.1| 2781|Homo sapiens bromodomain PHD finger
transcription factor protein.
Length = 2781
Score = 38.3 bits (85), Expect = 0.035
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -1
Query: 249 IGCDNCLAWYHLKCTIFSSEDYENVYNKEFVCPTCNN 139
IGCD C WYH +C + E + E+VCP C +
Sbjct: 2618 IGCDRCQNWYHGRCVGILQSEAELI--DEYVCPQCQS 2652
>AL390294-1|CAH73142.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 35.9 bits (79), Expect = 0.19
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -1
Query: 249 IGCDNCLAWYHLKCTIFSSEDYENVYNKEFVCPTCNNK*K 130
IGCD+C WYH C + E + ++ CP C NK K
Sbjct: 881 IGCDDCDDWYHWPCVGIMTAPPEEM---QWFCPKCANKKK 917
>AL353754-1|CAH73451.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 35.9 bits (79), Expect = 0.19
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -1
Query: 249 IGCDNCLAWYHLKCTIFSSEDYENVYNKEFVCPTCNNK*K 130
IGCD+C WYH C + E + ++ CP C NK K
Sbjct: 881 IGCDDCDDWYHWPCVGIMTAPPEEM---QWFCPKCANKKK 917
>AL159172-1|CAI15661.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 35.9 bits (79), Expect = 0.19
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -1
Query: 249 IGCDNCLAWYHLKCTIFSSEDYENVYNKEFVCPTCNNK*K 130
IGCD+C WYH C + E + ++ CP C NK K
Sbjct: 881 IGCDDCDDWYHWPCVGIMTAPPEEM---QWFCPKCANKKK 917
>S78570-1|AAB34770.1| 366|Homo sapiens MLL protein.
Length = 366
Score = 33.9 bits (74), Expect = 0.75
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -1
Query: 306 CDSCEEELTNDTDINVLKNIGCDNCLAWYHLKCTIFSSEDYENVYN-KEFVCPTCNN 139
CD C ++ +D + +++ C C W H KC S E YE + N E V TC N
Sbjct: 284 CDKCYDD--DDYESKMMQ---CGKCDRWVHSKCENLSDEMYEILSNLPECVAYTCVN 335
>L04284-1|AAA58669.1| 3969|Homo sapiens HRX protein.
Length = 3969
Score = 33.9 bits (74), Expect = 0.75
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -1
Query: 306 CDSCEEELTNDTDINVLKNIGCDNCLAWYHLKCTIFSSEDYENVYN-KEFVCPTCNN 139
CD C ++ +D + +++ C C W H KC S E YE + N E V TC N
Sbjct: 1572 CDKCYDD--DDYESKMMQ---CGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVN 1623
>L01986-1|AAA92511.1| 1012|Homo sapiens trithorax protein.
Length = 1012
Score = 33.9 bits (74), Expect = 0.75
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -1
Query: 306 CDSCEEELTNDTDINVLKNIGCDNCLAWYHLKCTIFSSEDYENVYN-KEFVCPTCNN 139
CD C ++ +D + +++ C C W H KC S E YE + N E V TC N
Sbjct: 256 CDKCYDD--DDYESKMMQ---CGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVN 307
>D14540-1|BAA03407.1| 1909|Homo sapiens MLL protein.
Length = 1909
Score = 33.9 bits (74), Expect = 0.75
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -1
Query: 306 CDSCEEELTNDTDINVLKNIGCDNCLAWYHLKCTIFSSEDYENVYN-KEFVCPTCNN 139
CD C ++ +D + +++ C C W H KC S E YE + N E V TC N
Sbjct: 1572 CDKCYDD--DDYESKMMQ---CGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVN 1623
>BC015733-1|AAH15733.1| 660|Homo sapiens CXXC1 protein protein.
Length = 660
Score = 33.9 bits (74), Expect = 0.75
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -1
Query: 270 DINVLKNIGCDNCLAWYHLKCTIFSSEDYENVYNKEFVCPTCNNK 136
DIN IGCDNC W+H C + + + + +E+ C C K
Sbjct: 35 DINCFM-IGCDNCNEWFHGDCIRITEKMAKAI--REWYCRECREK 76
>BC014940-1|AAH14940.1| 656|Homo sapiens CXXC finger 1 (PHD domain)
protein.
Length = 656
Score = 33.9 bits (74), Expect = 0.75
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -1
Query: 270 DINVLKNIGCDNCLAWYHLKCTIFSSEDYENVYNKEFVCPTCNNK 136
DIN IGCDNC W+H C + + + + +E+ C C K
Sbjct: 35 DINCFM-IGCDNCNEWFHGDCIRITEKMAKAI--REWYCRECREK 76
>AY373585-1|AAQ63624.1| 3969|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila)
protein.
Length = 3969
Score = 33.9 bits (74), Expect = 0.75
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -1
Query: 306 CDSCEEELTNDTDINVLKNIGCDNCLAWYHLKCTIFSSEDYENVYN-KEFVCPTCNN 139
CD C ++ +D + +++ C C W H KC S E YE + N E V TC N
Sbjct: 1572 CDKCYDD--DDYESKMMQ---CGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVN 1623
>AF492830-1|AAM33377.1| 182|Homo sapiens CDK6/MLL fusion protein
protein.
Length = 182
Score = 33.9 bits (74), Expect = 0.75
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -1
Query: 306 CDSCEEELTNDTDINVLKNIGCDNCLAWYHLKCTIFSSEDYENVYN-KEFVCPTCNN 139
CD C ++ +D + +++ C C W H KC S E YE + N E V TC N
Sbjct: 127 CDKCYDD--DDYESKMMQ---CGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVN 178
>AF149758-1|AAF37799.1| 656|Homo sapiens CpG binding protein
protein.
Length = 656
Score = 33.9 bits (74), Expect = 0.75
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -1
Query: 270 DINVLKNIGCDNCLAWYHLKCTIFSSEDYENVYNKEFVCPTCNNK 136
DIN IGCDNC W+H C + + + + +E+ C C K
Sbjct: 35 DINCFM-IGCDNCNEWFHGDCIRITEKMAKAI--REWYCRECREK 76
>AB209508-1|BAD92745.1| 2880|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila)
vari protein.
Length = 2880
Score = 33.9 bits (74), Expect = 0.75
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -1
Query: 306 CDSCEEELTNDTDINVLKNIGCDNCLAWYHLKCTIFSSEDYENVYN-KEFVCPTCNN 139
CD C ++ +D + +++ C C W H KC S E YE + N E V TC N
Sbjct: 483 CDKCYDD--DDYESKMMQ---CGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVN 534
>AB031069-1|BAA96307.1| 656|Homo sapiens protein containing CXXC
domain 1 protein.
Length = 656
Score = 33.9 bits (74), Expect = 0.75
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -1
Query: 270 DINVLKNIGCDNCLAWYHLKCTIFSSEDYENVYNKEFVCPTCNNK 136
DIN IGCDNC W+H C + + + + +E+ C C K
Sbjct: 35 DINCFM-IGCDNCNEWFHGDCIRITEKMAKAI--REWYCRECREK 76
>AJ007041-1|CAB45385.1| 2715|Homo sapiens trithorax homologue 2
protein.
Length = 2715
Score = 32.3 bits (70), Expect = 2.3
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 306 CDSCEEELTNDTDINVLKNIGCDNCLAWYHLKCTIFSSEDYE 181
C C E+ ND + +++ CD+ W H KC S EDYE
Sbjct: 1341 CTRCYED--NDYESKMMQCAQCDH---WVHAKCEGLSDEDYE 1377
>AF186605-1|AAD56420.1| 2605|Homo sapiens MLL2 protein protein.
Length = 2605
Score = 32.3 bits (70), Expect = 2.3
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 306 CDSCEEELTNDTDINVLKNIGCDNCLAWYHLKCTIFSSEDYE 181
C C E+ ND + +++ CD+ W H KC S EDYE
Sbjct: 1231 CTRCYED--NDYESKMMQCAQCDH---WVHAKCEGLSDEDYE 1267
>AF104918-1|AAD17932.1| 1010|Homo sapiens myeloid/lymphoid leukemia
2 protein.
Length = 1010
Score = 32.3 bits (70), Expect = 2.3
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -1
Query: 306 CDSCEEELTNDTDINVLKNIGCDNCLAWYHLKCTIFSSEDYE 181
C C E+ ND + +++ C C W H KC S EDYE
Sbjct: 679 CTRCYED--NDYESKMMQ---CAQCDYWVHAKCEGLSDEDYE 715
>AB002302-1|BAA20763.3| 2415|Homo sapiens KIAA0304 protein protein.
Length = 2415
Score = 32.3 bits (70), Expect = 2.3
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 306 CDSCEEELTNDTDINVLKNIGCDNCLAWYHLKCTIFSSEDYE 181
C C E+ ND + +++ CD+ W H KC S EDYE
Sbjct: 1041 CTRCYED--NDYESKMMQCAQCDH---WVHAKCEGLSDEDYE 1077
>BC117686-1|AAI17687.1| 1683|Homo sapiens SHPRH protein protein.
Length = 1683
Score = 30.7 bits (66), Expect = 7.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 249 IGCDNCLAWYHLKCTIFSSEDYENVYNKEFVCPTC 145
+ C C W H KC + D +N+ K F CP C
Sbjct: 675 VQCLKCHLWQHAKCVNY---DEKNLKIKPFYCPHC 706
>AY163808-1|AAO06907.1| 1659|Homo sapiens helicase-like protein
protein.
Length = 1659
Score = 30.7 bits (66), Expect = 7.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 249 IGCDNCLAWYHLKCTIFSSEDYENVYNKEFVCPTC 145
+ C C W H KC + D +N+ K F CP C
Sbjct: 675 VQCLKCHLWQHAKCVNY---DEKNLKIKPFYCPHC 706
>AY161136-1|AAO26201.1| 1683|Homo sapiens SNF2 histone linker PHD
RING helicase protein.
Length = 1683
Score = 30.7 bits (66), Expect = 7.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 249 IGCDNCLAWYHLKCTIFSSEDYENVYNKEFVCPTC 145
+ C C W H KC + D +N+ K F CP C
Sbjct: 675 VQCLKCHLWQHAKCVNY---DEKNLKIKPFYCPHC 706
>AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein.
Length = 4911
Score = 30.7 bits (66), Expect = 7.0
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = -1
Query: 243 CDNCLAWYHLKCTIFSSEDYENVYNKEFVCPTCNN 139
C+ C W HL+C + + + +E++C C +
Sbjct: 485 CNMCKRWVHLECDKPTDHELDTQLKEEYICMYCKH 519
>AL451145-1|CAH70765.1| 1683|Homo sapiens SNF2 histone linker PHD
RING helicase protein.
Length = 1683
Score = 30.7 bits (66), Expect = 7.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 249 IGCDNCLAWYHLKCTIFSSEDYENVYNKEFVCPTC 145
+ C C W H KC + D +N+ K F CP C
Sbjct: 675 VQCLKCHLWQHAKCVNY---DEKNLKIKPFYCPHC 706
>AL356599-2|CAI41120.1| 1683|Homo sapiens SNF2 histone linker PHD
RING helicase protein.
Length = 1683
Score = 30.7 bits (66), Expect = 7.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 249 IGCDNCLAWYHLKCTIFSSEDYENVYNKEFVCPTC 145
+ C C W H KC + D +N+ K F CP C
Sbjct: 675 VQCLKCHLWQHAKCVNY---DEKNLKIKPFYCPHC 706
>AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein.
Length = 4957
Score = 30.7 bits (66), Expect = 7.0
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -1
Query: 309 RCDSCEEELTNDTDINV-LKNIGCDNCLAWYHLKCTIFSSEDYE 181
RC C EE TD L N+ D W HL C ++S+E YE
Sbjct: 4451 RCCFCHEEGDGATDGPARLLNLDLD---LWVHLNCALWSTEVYE 4491
Score = 30.3 bits (65), Expect = 9.3
Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 249 IGCDNCLAWYHLKC-TIFSSEDYENVYNKEFVCPTC 145
I C +C W H C ++F+ +D ++ ++ F C +C
Sbjct: 941 IQCRHCERWMHAGCESLFTEDDVDHAPDEGFDCVSC 976
>AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.
Length = 5262
Score = 30.7 bits (66), Expect = 7.0
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -1
Query: 309 RCDSCEEELTNDTDINV-LKNIGCDNCLAWYHLKCTIFSSEDYE 181
RC C EE TD L N+ D W HL C ++S+E YE
Sbjct: 4756 RCCFCHEEGDGATDGPARLLNLDLD---LWVHLNCALWSTEVYE 4796
Score = 30.3 bits (65), Expect = 9.3
Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 249 IGCDNCLAWYHLKC-TIFSSEDYENVYNKEFVCPTC 145
I C +C W H C ++F+ +D ++ ++ F C +C
Sbjct: 1246 IQCRHCERWMHAGCESLFTEDDVDHAPDEGFDCVSC 1281
>AB209494-1|BAD92731.1| 2704|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia 2 variant protein.
Length = 2704
Score = 30.7 bits (66), Expect = 7.0
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -1
Query: 309 RCDSCEEELTNDTDINV-LKNIGCDNCLAWYHLKCTIFSSEDYE 181
RC C EE TD L N+ D W HL C ++S+E YE
Sbjct: 2198 RCCFCHEEGDGATDGPARLLNLDLD---LWVHLNCALWSTEVYE 2238
>AB095943-1|BAC23119.1| 1092|Homo sapiens KIAA2023 protein protein.
Length = 1092
Score = 30.7 bits (66), Expect = 7.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 249 IGCDNCLAWYHLKCTIFSSEDYENVYNKEFVCPTC 145
+ C C W H KC + D +N+ K F CP C
Sbjct: 260 VQCLKCHLWQHAKCVNY---DEKNLKIKPFYCPHC 291
>BC029908-1|AAH29908.1| 160|Homo sapiens TSPAN16 protein protein.
Length = 160
Score = 30.3 bits (65), Expect = 9.3
Identities = 12/37 (32%), Positives = 26/37 (70%)
Frame = -2
Query: 728 VLLILKIASESVEILHVSFPIIGDCTLDNNFINLTES 618
++LI+++ + +V +L FPI+GD L++ F+ L ++
Sbjct: 96 IVLIMEVTAATVVLLF--FPIVGDVALEHTFVTLRKN 130
>AF133424-1|AAF08363.1| 245|Homo sapiens tetraspanin TM4-B protein.
Length = 245
Score = 30.3 bits (65), Expect = 9.3
Identities = 12/37 (32%), Positives = 26/37 (70%)
Frame = -2
Query: 728 VLLILKIASESVEILHVSFPIIGDCTLDNNFINLTES 618
++LI+++ + +V +L FPI+GD L++ F+ L ++
Sbjct: 96 IVLIMEVTAATVVLLF--FPIVGDVALEHTFVTLRKN 130
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,462,452
Number of Sequences: 237096
Number of extensions: 1721731
Number of successful extensions: 3358
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 3221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3358
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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