Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11i21
(838 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 26 0.37
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 25 0.65
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 24 1.5
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 24 1.5
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 24 2.0
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 4.6
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 4.6
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 4.6
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 4.6
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 4.6
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 8.1
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 8.1
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 26.2 bits (55), Expect = 0.37
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -3
Query: 503 SLPGPGSKTPAPNTYSMPPVL 441
+L G GS TPA T S PP L
Sbjct: 17 NLKGGGSTTPASPTLSTPPTL 37
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 25.4 bits (53), Expect = 0.65
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +2
Query: 89 RQVNVR*QGSLQVLRSELLGRRTESVEFQMYVPA 190
R VN R GSLQ +LLG E Y P+
Sbjct: 387 RSVNPRYYGSLQAAARKLLGNAPEVENIWDYTPS 420
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 500 GLHGDLLKTPERGQGPPVRPY 562
G H +LL T GQ V PY
Sbjct: 77 GCHSNLLSTSPSGQNKAVAPY 97
Score = 23.0 bits (47), Expect = 3.5
Identities = 15/67 (22%), Positives = 32/67 (47%)
Frame = -3
Query: 419 KRAAPAFSITGRGKFSEAKGLMPGPGTYTTDRAAAALTKRPPAFTMAPRRELKPPTAAVP 240
K+ P S+T + ++A+ G + D + +++ P + ++KP TA++
Sbjct: 3 KKEKPMMSVTAIIQGTQAQHWSRGNTWLSLDNSNMSMSSVGPQSPL----DMKPDTASLI 58
Query: 239 GPGVYCP 219
PG + P
Sbjct: 59 NPGNFSP 65
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 500 GLHGDLLKTPERGQGPPVRPY 562
G H +LL T GQ V PY
Sbjct: 77 GCHSNLLSTSPSGQNKAVAPY 97
Score = 23.0 bits (47), Expect = 3.5
Identities = 15/67 (22%), Positives = 32/67 (47%)
Frame = -3
Query: 419 KRAAPAFSITGRGKFSEAKGLMPGPGTYTTDRAAAALTKRPPAFTMAPRRELKPPTAAVP 240
K+ P S+T + ++A+ G + D + +++ P + ++KP TA++
Sbjct: 3 KKEKPMMSVTAIIQGTQAQHWSRGNTWLSLDNSNMSMSSVGPQSPL----DMKPDTASLI 58
Query: 239 GPGVYCP 219
PG + P
Sbjct: 59 NPGNFSP 65
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 23.8 bits (49), Expect = 2.0
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = -3
Query: 374 SEAKGLMPGPGTYTTDRAAAALTKRPPAFTMAP--RRELKPPTAAVPGPG 231
SEAK P PG++ AA A T+ P P L+PP A G
Sbjct: 296 SEAKIFPPTPGSFNFSMAALA-TEHTPLSVKFPGMGHGLQPPDLAGTSQG 344
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.6 bits (46), Expect = 4.6
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3
Query: 302 RPPAFTMAPRRELKPPTAAVPGP 234
RP + +RE PPT A GP
Sbjct: 399 RPGENPVTQKREGGPPTGATTGP 421
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.6 bits (46), Expect = 4.6
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -3
Query: 332 TDRAAAALTKRPPAFTMAPRRELKPPTAAVPGP 234
T R A L++ +RE PPT A GP
Sbjct: 375 TQRLPAVLSRIGIILASPLKREGGPPTGATTGP 407
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.6 bits (46), Expect = 4.6
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3
Query: 302 RPPAFTMAPRRELKPPTAAVPGP 234
RP + +RE PPT A GP
Sbjct: 419 RPGENPVTQKREGGPPTGATTGP 441
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.6 bits (46), Expect = 4.6
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3
Query: 302 RPPAFTMAPRRELKPPTAAVPGP 234
RP + +RE PPT A GP
Sbjct: 368 RPGENPVTQKREGGPPTGATTGP 390
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 497 EGLHGDLLKTPERGQGP 547
EGL GD K + G GP
Sbjct: 521 EGLSGDKFKFDKNGDGP 537
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 8.1
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +2
Query: 377 TFHDL*Y*KPVQLFYSLLSLHQVPV 451
T H+ Y K +L+Y+++++ Q+PV
Sbjct: 322 TIHNNNYNK--KLYYNIINIEQIPV 344
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 8.1
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +1
Query: 355 INPLASENFPRPVILKAGAALLLPSFASPSTGGIE 459
+ PL+ E RP+I +L LP P +E
Sbjct: 1050 LRPLSMEKGTRPMIPDDNTSLALPKNEGPFRLNVE 1084
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 244,908
Number of Sequences: 438
Number of extensions: 6602
Number of successful extensions: 46
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26824317
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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