Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte11i20
         (798 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC018091-1|AAH18091.1|  214|Homo sapiens N-6 adenine-specific DN...   215   2e-55
AL512652-2|CAH71794.1|  214|Homo sapiens novel protein protein.       215   2e-55
AK057261-1|BAB71400.1|  209|Homo sapiens protein ( Homo sapiens ...    30   8.4  

>BC018091-1|AAH18091.1|  214|Homo sapiens N-6 adenine-specific DNA
           methyltransferase 2 (putative) protein.
          Length = 214

 Score =  215 bits (525), Expect = 2e-55
 Identities = 96/207 (46%), Positives = 143/207 (69%), Gaps = 1/207 (0%)
 Frame = -2

Query: 653 DEDVPTLSAETFAALQEFYAEQSKRQEILVKLEADKKLTENILFDENWQLSQFWYDEKTV 474
           D++ P LSA   AALQEFYAEQ ++    ++   D K    I+ +ENWQLSQFWY ++T 
Sbjct: 6   DDETPQLSAHALAALQEFYAEQKQQ----IEPGEDDKYNIGII-EENWQLSQFWYSQETA 60

Query: 473 HSLVKVIDKVLDDRGKVALISCPTLFVPLKRQIGDRGTVTLLEYDRRFEVHGPDYIFYDY 294
             L +     + + G++A +S P+++  L+    +  ++ + EYD+RF ++G ++IFYDY
Sbjct: 61  LQLAQEAIAAVGEGGRIACVSAPSVYQKLRELCRENFSIYIFEYDKRFAMYGEEFIFYDY 120

Query: 293 NNPKEVPPDVH-HSYDLVVADPPFLSEECITKTSETIKLLSKDKIILCTGTIMKDIVKEL 117
           NNP ++P  +  HS+D+V+ADPP+LSEEC+ KTSET+K L++ KI+LCTG IM++   EL
Sbjct: 121 NNPLDLPERIAAHSFDIVIADPPYLSEECLRKTSETVKYLTRGKILLCTGAIMEEQAAEL 180

Query: 116 LDLKLCEFQPKHRNNLANEFSCYANFD 36
           L +K+C F P+H  NLANEF CY N+D
Sbjct: 181 LGVKMCTFVPRHTRNLANEFRCYVNYD 207


>AL512652-2|CAH71794.1|  214|Homo sapiens novel protein protein.
          Length = 214

 Score =  215 bits (525), Expect = 2e-55
 Identities = 96/207 (46%), Positives = 143/207 (69%), Gaps = 1/207 (0%)
 Frame = -2

Query: 653 DEDVPTLSAETFAALQEFYAEQSKRQEILVKLEADKKLTENILFDENWQLSQFWYDEKTV 474
           D++ P LSA   AALQEFYAEQ ++    ++   D K    I+ +ENWQLSQFWY ++T 
Sbjct: 6   DDETPQLSAHALAALQEFYAEQKQQ----IEPGEDDKYNIGII-EENWQLSQFWYSQETA 60

Query: 473 HSLVKVIDKVLDDRGKVALISCPTLFVPLKRQIGDRGTVTLLEYDRRFEVHGPDYIFYDY 294
             L +     + + G++A +S P+++  L+    +  ++ + EYD+RF ++G ++IFYDY
Sbjct: 61  LQLAQEAIAAVGEGGRIACVSAPSVYQKLRELCRENFSIYIFEYDKRFAMYGEEFIFYDY 120

Query: 293 NNPKEVPPDVH-HSYDLVVADPPFLSEECITKTSETIKLLSKDKIILCTGTIMKDIVKEL 117
           NNP ++P  +  HS+D+V+ADPP+LSEEC+ KTSET+K L++ KI+LCTG IM++   EL
Sbjct: 121 NNPLDLPERIAAHSFDIVIADPPYLSEECLRKTSETVKYLTRGKILLCTGAIMEEQAAEL 180

Query: 116 LDLKLCEFQPKHRNNLANEFSCYANFD 36
           L +K+C F P+H  NLANEF CY N+D
Sbjct: 181 LGVKMCTFVPRHTRNLANEFRCYVNYD 207


>AK057261-1|BAB71400.1|  209|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32699 fis, clone TESTI2000435, weakly similar to
           CALDESMON. ).
          Length = 209

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 14/53 (26%), Positives = 27/53 (50%)
 Frame = -2

Query: 659 EADEDVPTLSAETFAALQEFYAEQSKRQEILVKLEADKKLTENILFDENWQLS 501
           + DE +  L        ++   E+S+RQE++ K+EA       +L  E W+++
Sbjct: 85  QRDEQLRALQERLGQQQRDMEEERSRRQEVIGKMEARLNEQSRLLEQERWRVT 137


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,816,347
Number of Sequences: 237096
Number of extensions: 2056764
Number of successful extensions: 4038
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4034
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)