Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11i09
(893 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118327-1|AAM48356.1| 340|Drosophila melanogaster LD21120p pro... 369 e-102
AF170829-4|AAD49741.1| 340|Drosophila melanogaster putative mRN... 369 e-102
AE014297-2617|AAF55627.1| 340|Drosophila melanogaster CG6011-PA... 369 e-102
X53959-1|CAA37910.1| 1480|Drosophila melanogaster slit protein p... 34 0.23
AE013599-2125|AAF58098.1| 1480|Drosophila melanogaster CG8355-PA... 34 0.23
AE013599-2124|AAM70966.1| 1469|Drosophila melanogaster CG8355-PB... 34 0.23
BT025961-1|ABG02205.1| 149|Drosophila melanogaster IP16087p pro... 32 1.2
AF126540-1|AAD26567.1| 1504|Drosophila melanogaster slit protein... 32 1.2
AE013599-2126|AAF58097.1| 1504|Drosophila melanogaster CG8355-PC... 32 1.2
AY113360-1|AAM29365.1| 662|Drosophila melanogaster HL08076p pro... 31 2.1
AY061028-1|AAL28576.1| 721|Drosophila melanogaster HL05638p pro... 31 2.1
AE014296-1482|AAN12010.2| 721|Drosophila melanogaster CG32355-P... 31 2.1
AE014134-3393|AAN11119.2| 1483|Drosophila melanogaster CG31623-P... 31 2.1
AY049773-1|AAL12209.1| 1483|Drosophila melanogaster defective tr... 29 6.5
>AY118327-1|AAM48356.1| 340|Drosophila melanogaster LD21120p
protein.
Length = 340
Score = 369 bits (909), Expect = e-102
Identities = 176/258 (68%), Positives = 210/258 (81%)
Frame = -2
Query: 775 LPRNEVIKRLRERGHPILLFAETEIQSFKRLRRIEIQEPEVNRGFRNDFQEAMEKVDEAY 596
LPR EVI+RLRERG PIL+F ETE ++F RLR+ EI +PE NRGFRNDFQEAME+VD AY
Sbjct: 74 LPRTEVIRRLRERGEPILIFGETEPEAFDRLRQCEISQPEANRGFRNDFQEAMEQVDAAY 133
Query: 595 LNEILALGTQNEGENSSKEDALDDSITYETIQEMAKTMGQGDRNHDMNVIMTLLQFLLKL 416
L E+ A + + S LD+S+++E+IQ MA MG+ ++++DM+VI+TLL FLLKL
Sbjct: 134 LQEMFANTPTTKEDKKSDFAELDESVSWESIQTMAANMGR-NKDYDMDVIITLLTFLLKL 192
Query: 415 WGQQLSSAAAGQKAAIKHKMTRATYTQTQVYLKPLMRKLKKKNLPEDICDSLTEITKHLL 236
W Q+++ + +K + K KMTR YTQT+ Y+KPL RKLK LPEDI DSL +I KHLL
Sbjct: 193 WNDQIANYSKHEKMSTKVKMTRVIYTQTKEYVKPLFRKLKHHTLPEDILDSLRDICKHLL 252
Query: 235 DRNYIMASDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKNVAHVMNDETQRKYIQAL 56
+RNYI ASDAYL+MAIGNAPWPIGVTMVGIHARTGREKIFSKNVAHVMNDETQRKYIQ L
Sbjct: 253 NRNYITASDAYLEMAIGNAPWPIGVTMVGIHARTGREKIFSKNVAHVMNDETQRKYIQGL 312
Query: 55 KRLMTKCQEYFPTDPSRC 2
KRLMTKCQEYFPTDPS+C
Sbjct: 313 KRLMTKCQEYFPTDPSKC 330
>AF170829-4|AAD49741.1| 340|Drosophila melanogaster putative mRNA
splicing factor protein.
Length = 340
Score = 369 bits (909), Expect = e-102
Identities = 176/258 (68%), Positives = 210/258 (81%)
Frame = -2
Query: 775 LPRNEVIKRLRERGHPILLFAETEIQSFKRLRRIEIQEPEVNRGFRNDFQEAMEKVDEAY 596
LPR EVI+RLRERG PIL+F ETE ++F RLR+ EI +PE NRGFRNDFQEAME+VD AY
Sbjct: 74 LPRTEVIRRLRERGEPILIFGETEPEAFDRLRQCEISQPEANRGFRNDFQEAMEQVDAAY 133
Query: 595 LNEILALGTQNEGENSSKEDALDDSITYETIQEMAKTMGQGDRNHDMNVIMTLLQFLLKL 416
L E+ A + + S LD+S+++E+IQ MA MG+ ++++DM+VI+TLL FLLKL
Sbjct: 134 LQEMFANTPTTKEDKKSDFAELDESVSWESIQTMAANMGR-NKDYDMDVIITLLTFLLKL 192
Query: 415 WGQQLSSAAAGQKAAIKHKMTRATYTQTQVYLKPLMRKLKKKNLPEDICDSLTEITKHLL 236
W Q+++ + +K + K KMTR YTQT+ Y+KPL RKLK LPEDI DSL +I KHLL
Sbjct: 193 WNDQIANYSKHEKMSTKVKMTRVIYTQTKEYVKPLFRKLKHHTLPEDILDSLRDICKHLL 252
Query: 235 DRNYIMASDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKNVAHVMNDETQRKYIQAL 56
+RNYI ASDAYL+MAIGNAPWPIGVTMVGIHARTGREKIFSKNVAHVMNDETQRKYIQ L
Sbjct: 253 NRNYITASDAYLEMAIGNAPWPIGVTMVGIHARTGREKIFSKNVAHVMNDETQRKYIQGL 312
Query: 55 KRLMTKCQEYFPTDPSRC 2
KRLMTKCQEYFPTDPS+C
Sbjct: 313 KRLMTKCQEYFPTDPSKC 330
>AE014297-2617|AAF55627.1| 340|Drosophila melanogaster CG6011-PA
protein.
Length = 340
Score = 369 bits (909), Expect = e-102
Identities = 176/258 (68%), Positives = 210/258 (81%)
Frame = -2
Query: 775 LPRNEVIKRLRERGHPILLFAETEIQSFKRLRRIEIQEPEVNRGFRNDFQEAMEKVDEAY 596
LPR EVI+RLRERG PIL+F ETE ++F RLR+ EI +PE NRGFRNDFQEAME+VD AY
Sbjct: 74 LPRTEVIRRLRERGEPILIFGETEPEAFDRLRQCEISQPEANRGFRNDFQEAMEQVDAAY 133
Query: 595 LNEILALGTQNEGENSSKEDALDDSITYETIQEMAKTMGQGDRNHDMNVIMTLLQFLLKL 416
L E+ A + + S LD+S+++E+IQ MA MG+ ++++DM+VI+TLL FLLKL
Sbjct: 134 LQEMFANTPTTKEDKKSDFAELDESVSWESIQTMAANMGR-NKDYDMDVIITLLTFLLKL 192
Query: 415 WGQQLSSAAAGQKAAIKHKMTRATYTQTQVYLKPLMRKLKKKNLPEDICDSLTEITKHLL 236
W Q+++ + +K + K KMTR YTQT+ Y+KPL RKLK LPEDI DSL +I KHLL
Sbjct: 193 WNDQIANYSKHEKMSTKVKMTRVIYTQTKEYVKPLFRKLKHHTLPEDILDSLRDICKHLL 252
Query: 235 DRNYIMASDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKNVAHVMNDETQRKYIQAL 56
+RNYI ASDAYL+MAIGNAPWPIGVTMVGIHARTGREKIFSKNVAHVMNDETQRKYIQ L
Sbjct: 253 NRNYITASDAYLEMAIGNAPWPIGVTMVGIHARTGREKIFSKNVAHVMNDETQRKYIQGL 312
Query: 55 KRLMTKCQEYFPTDPSRC 2
KRLMTKCQEYFPTDPS+C
Sbjct: 313 KRLMTKCQEYFPTDPSKC 330
>X53959-1|CAA37910.1| 1480|Drosophila melanogaster slit protein
protein.
Length = 1480
Score = 34.3 bits (75), Expect = 0.23
Identities = 24/93 (25%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Frame = -2
Query: 784 LPALPR--NEVIKRLRERGHPILLFAETEIQSFKRLRRIEIQEPEVNRGFRNDFQE--AM 617
L ++PR + ++RL +G+ + + ET+ Q +LR +++ + +++ RN FQ+ ++
Sbjct: 91 LTSVPRKISADVERLELQGNNLTVIYETDFQRLTKLRMLQLTDNQIHTIERNSFQDLVSL 150
Query: 616 EKVDEAYLNEILALGTQ-NEGENSSKEDALDDS 521
E++D + N I +G + +G S + LD++
Sbjct: 151 ERLDISN-NVITTVGRRVFKGAQSLRSLQLDNN 182
>AE013599-2125|AAF58098.1| 1480|Drosophila melanogaster CG8355-PA,
isoform A protein.
Length = 1480
Score = 34.3 bits (75), Expect = 0.23
Identities = 24/93 (25%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Frame = -2
Query: 784 LPALPR--NEVIKRLRERGHPILLFAETEIQSFKRLRRIEIQEPEVNRGFRNDFQE--AM 617
L ++PR + ++RL +G+ + + ET+ Q +LR +++ + +++ RN FQ+ ++
Sbjct: 91 LTSVPRKISADVERLELQGNNLTVIYETDFQRLTKLRMLQLTDNQIHTIERNSFQDLVSL 150
Query: 616 EKVDEAYLNEILALGTQ-NEGENSSKEDALDDS 521
E++D + N I +G + +G S + LD++
Sbjct: 151 ERLDISN-NVITTVGRRVFKGAQSLRSLQLDNN 182
>AE013599-2124|AAM70966.1| 1469|Drosophila melanogaster CG8355-PB,
isoform B protein.
Length = 1469
Score = 34.3 bits (75), Expect = 0.23
Identities = 24/93 (25%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Frame = -2
Query: 784 LPALPR--NEVIKRLRERGHPILLFAETEIQSFKRLRRIEIQEPEVNRGFRNDFQE--AM 617
L ++PR + ++RL +G+ + + ET+ Q +LR +++ + +++ RN FQ+ ++
Sbjct: 91 LTSVPRKISADVERLELQGNNLTVIYETDFQRLTKLRMLQLTDNQIHTIERNSFQDLVSL 150
Query: 616 EKVDEAYLNEILALGTQ-NEGENSSKEDALDDS 521
E++D + N I +G + +G S + LD++
Sbjct: 151 ERLDISN-NVITTVGRRVFKGAQSLRSLQLDNN 182
>BT025961-1|ABG02205.1| 149|Drosophila melanogaster IP16087p
protein.
Length = 149
Score = 31.9 bits (69), Expect = 1.2
Identities = 15/56 (26%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Frame = -2
Query: 784 LPALPR--NEVIKRLRERGHPILLFAETEIQSFKRLRRIEIQEPEVNRGFRNDFQE 623
L ++PR + ++RL +G+ + + ET+ Q +LR +++ + +++ RN FQ+
Sbjct: 91 LTSVPRKISADVERLELQGNNLTVIYETDFQRLTKLRMLQLTDNQIHTIERNSFQD 146
>AF126540-1|AAD26567.1| 1504|Drosophila melanogaster slit protein
protein.
Length = 1504
Score = 31.9 bits (69), Expect = 1.2
Identities = 15/56 (26%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Frame = -2
Query: 784 LPALPR--NEVIKRLRERGHPILLFAETEIQSFKRLRRIEIQEPEVNRGFRNDFQE 623
L ++PR + ++RL +G+ + + ET+ Q +LR +++ + +++ RN FQ+
Sbjct: 91 LTSVPRKISADVERLELQGNNLTVIYETDFQRLTKLRMLQLTDNQIHTIERNSFQD 146
>AE013599-2126|AAF58097.1| 1504|Drosophila melanogaster CG8355-PC,
isoform C protein.
Length = 1504
Score = 31.9 bits (69), Expect = 1.2
Identities = 15/56 (26%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Frame = -2
Query: 784 LPALPR--NEVIKRLRERGHPILLFAETEIQSFKRLRRIEIQEPEVNRGFRNDFQE 623
L ++PR + ++RL +G+ + + ET+ Q +LR +++ + +++ RN FQ+
Sbjct: 91 LTSVPRKISADVERLELQGNNLTVIYETDFQRLTKLRMLQLTDNQIHTIERNSFQD 146
>AY113360-1|AAM29365.1| 662|Drosophila melanogaster HL08076p
protein.
Length = 662
Score = 31.1 bits (67), Expect = 2.1
Identities = 24/95 (25%), Positives = 42/95 (44%)
Frame = -2
Query: 775 LPRNEVIKRLRERGHPILLFAETEIQSFKRLRRIEIQEPEVNRGFRNDFQEAMEKVDEAY 596
L +EV + LR+ + F+E E + E+ E E+ + QEAMEK Y
Sbjct: 129 LEDDEVERTLRDSEYEEEKFSEQEEEQETTKLEKELTEQELEEALEKELQEAMEKELSDY 188
Query: 595 LNEILALGTQNEGENSSKEDALDDSITYETIQEMA 491
+ ++ E S +E A + +++ +E A
Sbjct: 189 RQKEKEQESEQEQAFSEEELAASEIDYHQSEEEQA 223
>AY061028-1|AAL28576.1| 721|Drosophila melanogaster HL05638p
protein.
Length = 721
Score = 31.1 bits (67), Expect = 2.1
Identities = 24/95 (25%), Positives = 42/95 (44%)
Frame = -2
Query: 775 LPRNEVIKRLRERGHPILLFAETEIQSFKRLRRIEIQEPEVNRGFRNDFQEAMEKVDEAY 596
L +EV + LR+ + F+E E + E+ E E+ + QEAMEK Y
Sbjct: 188 LEDDEVERTLRDSEYEEEKFSEQEEEQETTKLEKELTEQELEEALEKELQEAMEKELSDY 247
Query: 595 LNEILALGTQNEGENSSKEDALDDSITYETIQEMA 491
+ ++ E S +E A + +++ +E A
Sbjct: 248 RQKEKEQESEQEQAFSEEELAASEIDYHQSEEEQA 282
>AE014296-1482|AAN12010.2| 721|Drosophila melanogaster CG32355-PA
protein.
Length = 721
Score = 31.1 bits (67), Expect = 2.1
Identities = 24/95 (25%), Positives = 42/95 (44%)
Frame = -2
Query: 775 LPRNEVIKRLRERGHPILLFAETEIQSFKRLRRIEIQEPEVNRGFRNDFQEAMEKVDEAY 596
L +EV + LR+ + F+E E + E+ E E+ + QEAMEK Y
Sbjct: 188 LEDDEVERTLRDSEYEEEKFSEQEEEQETTKLEKELTEQELEEALEKELQEAMEKELSDY 247
Query: 595 LNEILALGTQNEGENSSKEDALDDSITYETIQEMA 491
+ ++ E S +E A + +++ +E A
Sbjct: 248 RQKEKEQESEQEQAFSEEELAASEIDYHQSEEEQA 282
>AE014134-3393|AAN11119.2| 1483|Drosophila melanogaster CG31623-PA
protein.
Length = 1483
Score = 31.1 bits (67), Expect = 2.1
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = -2
Query: 763 EVIKRLRERGHPILLFAETEIQSFK--RLRRIEIQEPEVNRGFRNDFQEAMEKVDEAYLN 590
E +R R +P ++ T F + + E++ G + + + E++ E
Sbjct: 1262 EATRRNLRRYNPNIMHISTSNHPFSTNNILPTKTSTSELSEGAKAKWAKIAERLHEFLDP 1321
Query: 589 EILA-LGTQNEGENSSKEDALDDSITYETIQE 497
E +A L + GE+ ED+ DD+IT T++E
Sbjct: 1322 ETIANLNKEQFGESDECEDSQDDNITDITVEE 1353
>AY049773-1|AAL12209.1| 1483|Drosophila melanogaster defective
transmitter-recyclingprotein protein.
Length = 1483
Score = 29.5 bits (63), Expect = 6.5
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = -2
Query: 658 EVNRGFRNDFQEAMEKVDEAYLNEILA-LGTQNEGENSSKEDALDDSITYETIQE 497
E++ G + + + E++ E E +A L + GE+ ED+ DD+IT T++E
Sbjct: 1299 ELSEGAKAKWAKIAERLHEFLDPETIANLNKEQFGESDECEDSQDDNITDITVEE 1353
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,446,619
Number of Sequences: 53049
Number of extensions: 694307
Number of successful extensions: 2007
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2004
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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