Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11h14
(787 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 25 0.80
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 25 0.80
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 24 1.8
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 3.2
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 3.2
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 3.2
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 3.2
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 4.3
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 4.3
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 7.4
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 22 7.4
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 7.4
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 22 7.4
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 22 7.4
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 22 7.4
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 7.4
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 21 9.8
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 21 9.8
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 25.0 bits (52), Expect = 0.80
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 254 SNDYNKVNYYKHSSCLHNQYKYINISKIDLSIFYP 358
SN+YN NY + + Y INI +I + + P
Sbjct: 306 SNNYNYKNYNNNYNSKKLYYNIINIEQIPVPVPVP 340
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 25.0 bits (52), Expect = 0.80
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 254 SNDYNKVNYYKHSSCLHNQYKYINISKIDLSIFYP 358
SN+YN NY + + Y INI +I + + P
Sbjct: 317 SNNYNYKNYNNNYNSKKLYYNIINIEQIPVPVPVP 351
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 257 NDYNKVNYYKHSSCLHNQYKYINISKIDLSI 349
N+YN NY ++ L+ + INI +I + +
Sbjct: 331 NNYNNNNYNNYNKKLYYKNYIINIEQIPVPV 361
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.0 bits (47), Expect = 3.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 718 DPF*NFVVTTVKYQLTAVTDV 656
DP +F + ++ Y+ TA+T V
Sbjct: 197 DPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.0 bits (47), Expect = 3.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 718 DPF*NFVVTTVKYQLTAVTDV 656
DP +F + ++ Y+ TA+T V
Sbjct: 197 DPLCSFAIESISYEQTAITYV 217
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.0 bits (47), Expect = 3.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 718 DPF*NFVVTTVKYQLTAVTDV 656
DP +F + ++ Y+ TA+T V
Sbjct: 248 DPLCSFAIESISYEQTAITYV 268
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.0 bits (47), Expect = 3.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 718 DPF*NFVVTTVKYQLTAVTDV 656
DP +F + ++ Y+ TA+T V
Sbjct: 197 DPLCSFAIESISYEQTAITYV 217
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.6 bits (46), Expect = 4.3
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +2
Query: 254 SNDYNKVNYYKHSSCLHNQYKYINISKIDLSIFYP 358
+N+YN N +++ Y INI +I + + P
Sbjct: 335 NNNYNNYNNNNYNNYKKLYYNIINIEQIPVPVPVP 369
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.6 bits (46), Expect = 4.3
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +2
Query: 254 SNDYNKVNYYKHSSCLHNQYK--YINISKID 340
+N+YN N Y ++ +N YK Y NI+ I+
Sbjct: 331 NNNYNNYNNYNNN--YNNNYKKLYYNINYIE 359
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 7.4
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -2
Query: 504 PPLILEIHHYTHQRNSKYKYN 442
P +I + + T N+ YKYN
Sbjct: 79 PKIISSLSNKTIHNNNNYKYN 99
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 7.4
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -2
Query: 504 PPLILEIHHYTHQRNSKYKYN 442
P +I + + T N+ YKYN
Sbjct: 79 PKIISSLSNKTIHNNNNYKYN 99
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.8 bits (44), Expect = 7.4
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -2
Query: 504 PPLILEIHHYTHQRNSKYKYN 442
P +I + + T N+ YKYN
Sbjct: 79 PKIISSLSNRTIHNNNNYKYN 99
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.8 bits (44), Expect = 7.4
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -2
Query: 504 PPLILEIHHYTHQRNSKYKYN 442
P +I + + T N+ YKYN
Sbjct: 79 PKIISSLSNKTIHNNNNYKYN 99
Score = 21.4 bits (43), Expect = 9.8
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 260 DYNKVNYYKHSSCLHNQYKYINISKIDLSIFY 355
+YN NY + L+ YI I + ++Y
Sbjct: 99 NYNNNNYNNNCKKLYYNINYIEQIPIPVPVYY 130
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.8 bits (44), Expect = 7.4
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -2
Query: 504 PPLILEIHHYTHQRNSKYKYN 442
P +I + + T N+ YKYN
Sbjct: 79 PKIISSLSNKTIHNNNNYKYN 99
Score = 21.4 bits (43), Expect = 9.8
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 260 DYNKVNYYKHSSCLHNQYKYINISKIDLSIFY 355
+YN NY + L+ YI I + ++Y
Sbjct: 99 NYNNNNYNNNCKKLYYNINYIEQIPIPVPVYY 130
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.8 bits (44), Expect = 7.4
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -2
Query: 504 PPLILEIHHYTHQRNSKYKYN 442
P +I + + T N+ YKYN
Sbjct: 79 PKIISSLSNKTIHNNNNYKYN 99
Score = 21.4 bits (43), Expect = 9.8
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 260 DYNKVNYYKHSSCLHNQYKYINISKIDLSIFY 355
+YN NY + L+ YI I + ++Y
Sbjct: 99 NYNNNNYNNNCKKLYYNINYIEQIPIPVPVYY 130
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 7.4
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -2
Query: 504 PPLILEIHHYTHQRNSKYKYN 442
P +I + + T N+ YKYN
Sbjct: 312 PKIISSLSNKTIHNNNNYKYN 332
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 21.4 bits (43), Expect = 9.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 426 NYEQKHYIYISNYVGVYSD 482
N E HY+ I Y+G+ S+
Sbjct: 288 NIEGTHYVKIVYYLGIPSE 306
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 21.4 bits (43), Expect = 9.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 426 NYEQKHYIYISNYVGVYSD 482
N E HY+ I Y+G+ S+
Sbjct: 303 NIEGTHYVKIVYYLGIPSE 321
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,008
Number of Sequences: 438
Number of extensions: 3845
Number of successful extensions: 31
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -