Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11h07
(744 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC035001-1|AAH35001.1| 262|Homo sapiens chromosome 19 open read... 66 2e-10
BC032948-1|AAH32948.1| 262|Homo sapiens chromosome 19 open read... 66 2e-10
AY761097-1|AAV30545.1| 262|Homo sapiens hematopoietic signal pe... 64 5e-10
AY358710-1|AAQ89073.1| 269|Homo sapiens AAAS764 protein. 64 5e-10
AY761095-1|AAV30543.1| 254|Homo sapiens hematopoietic signal pe... 45 3e-04
U43195-1|AAB02814.1| 1354|Homo sapiens Rho-associated, coiled-co... 33 1.4
BC113114-1|AAI13115.1| 1354|Homo sapiens Rho-associated, coiled-... 33 1.4
AB208965-1|BAD92202.1| 705|Homo sapiens Rho-associated, coiled-... 33 1.4
BC050324-1|AAH50324.1| 632|Homo sapiens zinc finger, DHHC-type ... 30 7.6
AB097035-1|BAC77388.1| 622|Homo sapiens putative MAPK activatin... 30 7.6
AB097013-1|BAC77366.1| 622|Homo sapiens putative NFkB activatin... 30 7.6
AB024494-1|BAC22089.1| 633|Homo sapiens huntingtin interacting ... 30 7.6
AB023163-1|BAA76790.1| 667|Homo sapiens KIAA0946 protein protein. 30 7.6
>BC035001-1|AAH35001.1| 262|Homo sapiens chromosome 19 open reading
frame 63 protein.
Length = 262
Score = 65.7 bits (153), Expect = 2e-10
Identities = 42/127 (33%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
Frame = -1
Query: 519 YLSS-VKAQAFLENGLSDVINAWILPNGAVIAVNFQV-ANSTQPLKQATNEYKL-NSKFY 349
Y+SS V A + +E+ LSD + + G V+ V+ + + + +L N+
Sbjct: 127 YVSSFVPACSLVESHLSDQLTLHVDVAGNVVGVSVVTHPGGCRGHEVEDVDLELFNTSVQ 186
Query: 348 LRYIEQAPVPDTASYIQKMERDREAREKGEMKDNRSFLAKYWMYIVPVAIFVMISGATNP 169
L+ AP P+TA++I+++E ++ + K ++ +SF AKYWMYI+PV +F+M+SGA P
Sbjct: 187 LQPPTTAPGPETAAFIERLEMEQAQKAKNP-QEQKSFFAKYWMYIIPVVLFLMMSGA--P 243
Query: 168 EASAPAG 148
+A G
Sbjct: 244 DAGGQGG 250
>BC032948-1|AAH32948.1| 262|Homo sapiens chromosome 19 open reading
frame 63 protein.
Length = 262
Score = 65.7 bits (153), Expect = 2e-10
Identities = 42/127 (33%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
Frame = -1
Query: 519 YLSS-VKAQAFLENGLSDVINAWILPNGAVIAVNFQV-ANSTQPLKQATNEYKL-NSKFY 349
Y+SS V A + +E+ LSD + + G V+ V+ + + + +L N+
Sbjct: 127 YVSSFVPACSLVESHLSDQLTLHVDVAGNVVGVSVVTHPGGCRGHEVEDVDLELFNTSVQ 186
Query: 348 LRYIEQAPVPDTASYIQKMERDREAREKGEMKDNRSFLAKYWMYIVPVAIFVMISGATNP 169
L+ AP P+TA++I+++E ++ + K ++ +SF AKYWMYI+PV +F+M+SGA P
Sbjct: 187 LQPPTTAPGPETAAFIERLEMEQAQKAKNP-QEQKSFFAKYWMYIIPVVLFLMMSGA--P 243
Query: 168 EASAPAG 148
+A G
Sbjct: 244 DAGGQGG 250
>AY761097-1|AAV30545.1| 262|Homo sapiens hematopoietic signal
peptide-containing membrane domain-containing 1 protein.
Length = 262
Score = 64.1 bits (149), Expect = 5e-10
Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 3/127 (2%)
Frame = -1
Query: 519 YLSS-VKAQAFLENGLSDVINAWILPNGAVIAVNFQV-ANSTQPLKQATNEYKL-NSKFY 349
Y+SS V A + +E+ LSD + + G V+ V+ + + + +L N+
Sbjct: 127 YVSSFVPACSLVESHLSDQLTLHVDVAGNVVGVSVVTHPGGCRGHEVEDVDLELFNTSVQ 186
Query: 348 LRYIEQAPVPDTASYIQKMERDREAREKGEMKDNRSFLAKYWMYIVPVAIFVMISGATNP 169
L+ AP P+TA++I+++E ++ + K ++ +SF AKYWMYI+PV +F+M+SGA P
Sbjct: 187 LQPPTTAPGPETAAFIERLEMEQAQKAKNP-QEQKSFFAKYWMYIIPVVLFLMMSGA--P 243
Query: 168 EASAPAG 148
+ G
Sbjct: 244 DTGGQGG 250
>AY358710-1|AAQ89073.1| 269|Homo sapiens AAAS764 protein.
Length = 269
Score = 64.1 bits (149), Expect = 5e-10
Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 3/127 (2%)
Frame = -1
Query: 519 YLSS-VKAQAFLENGLSDVINAWILPNGAVIAVNFQV-ANSTQPLKQATNEYKL-NSKFY 349
Y+SS V A + +E+ LSD + + G V+ V+ + + + +L N+
Sbjct: 127 YVSSFVPACSLVESHLSDQLTLHVDVAGNVVGVSVVTHPGGCRGHEVEDVDLELFNTSVQ 186
Query: 348 LRYIEQAPVPDTASYIQKMERDREAREKGEMKDNRSFLAKYWMYIVPVAIFVMISGATNP 169
L+ AP P+TA++I+++E ++ + K ++ +SF AKYWMYI+PV +F+M+SGA P
Sbjct: 187 LQPPTTAPGPETAAFIERLEMEQAQKAKNP-QEQKSFFAKYWMYIIPVVLFLMMSGA--P 243
Query: 168 EASAPAG 148
+ G
Sbjct: 244 DTGGQGG 250
>AY761095-1|AAV30543.1| 254|Homo sapiens hematopoietic signal
peptide-containing secreted 1 protein.
Length = 254
Score = 44.8 bits (101), Expect = 3e-04
Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Frame = -1
Query: 519 YLSS-VKAQAFLENGLSDVINAWILPNGAVIAVNFQV-ANSTQPLKQATNEYKL-NSKFY 349
Y+SS V A + +E+ LSD + + G V+ V+ + + + +L N+
Sbjct: 127 YVSSFVPACSLVESHLSDQLTLHVDVAGNVVGVSVVTHPGGCRGHEVEDVDLELFNTSVQ 186
Query: 348 LRYIEQAPVPDTASYIQKMERDREAREKGEMKDNRSFLAKYWMYIVPVAIFVMISGATNP 169
L+ AP P+TA++I+++E ++ + K ++ +SF AKYW I+ A+ + A P
Sbjct: 187 LQPPTTAPGPETAAFIERLEMEQAQKAKNP-QEQKSFFAKYWHIILGGAVLLT---ALRP 242
Query: 168 EASAPA 151
A PA
Sbjct: 243 AAPGPA 248
>U43195-1|AAB02814.1| 1354|Homo sapiens Rho-associated, coiled-coil
containing protein kinase p160ROCK protein.
Length = 1354
Score = 32.7 bits (71), Expect = 1.4
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = -1
Query: 444 NGAVIAVNFQVANSTQPLKQATNEYKLNSKFYL---RYIEQAPVPDTASYIQKMERDREA 274
N I +N+++ + Q L+Q NE+K+ + IE+A +K++ +REA
Sbjct: 667 NNLEIDLNYKLKSLQQRLEQEVNEHKVTKARLTDKHQSIEEAKSVAMCEMEKKLKEEREA 726
Query: 273 REKGE 259
REK E
Sbjct: 727 REKAE 731
>BC113114-1|AAI13115.1| 1354|Homo sapiens Rho-associated,
coiled-coil containing protein kinase 1 protein.
Length = 1354
Score = 32.7 bits (71), Expect = 1.4
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = -1
Query: 444 NGAVIAVNFQVANSTQPLKQATNEYKLNSKFYL---RYIEQAPVPDTASYIQKMERDREA 274
N I +N+++ + Q L+Q NE+K+ + IE+A +K++ +REA
Sbjct: 667 NNLEIDLNYKLKSLQQRLEQEVNEHKVTKARLTDKHQSIEEAKSVAMCEMEKKLKEEREA 726
Query: 273 REKGE 259
REK E
Sbjct: 727 REKAE 731
>AB208965-1|BAD92202.1| 705|Homo sapiens Rho-associated,
coiled-coil containing protein kinase 1 variant protein.
Length = 705
Score = 32.7 bits (71), Expect = 1.4
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = -1
Query: 444 NGAVIAVNFQVANSTQPLKQATNEYKLNSKFYL---RYIEQAPVPDTASYIQKMERDREA 274
N I +N+++ + Q L+Q NE+K+ + IE+A +K++ +REA
Sbjct: 345 NNLEIDLNYKLKSLQQRLEQEVNEHKVTKARLTDKHQSIEEAKSVAMCEMEKKLKEEREA 404
Query: 273 REKGE 259
REK E
Sbjct: 405 REKAE 409
>BC050324-1|AAH50324.1| 632|Homo sapiens zinc finger, DHHC-type
containing 17 protein.
Length = 632
Score = 30.3 bits (65), Expect = 7.6
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = -1
Query: 480 GLSDVINAWILPNGAVIAVNFQVANSTQPLKQATNEYKLNSKFYLRYIEQAPVPDTASYI 301
G + VI+ + V A N + ++ KQ N + +N +L+ QA D S++
Sbjct: 236 GNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMIN---HLQEARQAKGYDNPSFL 292
Query: 300 QKMERDREAREK 265
+K++ D+E R+K
Sbjct: 293 RKLKADKEFRQK 304
>AB097035-1|BAC77388.1| 622|Homo sapiens putative MAPK activating
protein protein.
Length = 622
Score = 30.3 bits (65), Expect = 7.6
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = -1
Query: 480 GLSDVINAWILPNGAVIAVNFQVANSTQPLKQATNEYKLNSKFYLRYIEQAPVPDTASYI 301
G + VI+ + V A N + ++ KQ N + +N +L+ QA D S++
Sbjct: 226 GNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMIN---HLQEARQAKGYDNPSFL 282
Query: 300 QKMERDREAREK 265
+K++ D+E R+K
Sbjct: 283 RKLKADKEFRQK 294
>AB097013-1|BAC77366.1| 622|Homo sapiens putative NFkB activating
protein protein.
Length = 622
Score = 30.3 bits (65), Expect = 7.6
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = -1
Query: 480 GLSDVINAWILPNGAVIAVNFQVANSTQPLKQATNEYKLNSKFYLRYIEQAPVPDTASYI 301
G + VI+ + V A N + ++ KQ N + +N +L+ QA D S++
Sbjct: 226 GNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMIN---HLQEARQAKGYDNPSFL 282
Query: 300 QKMERDREAREK 265
+K++ D+E R+K
Sbjct: 283 RKLKADKEFRQK 294
>AB024494-1|BAC22089.1| 633|Homo sapiens huntingtin interacting
protein 3 protein.
Length = 633
Score = 30.3 bits (65), Expect = 7.6
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = -1
Query: 480 GLSDVINAWILPNGAVIAVNFQVANSTQPLKQATNEYKLNSKFYLRYIEQAPVPDTASYI 301
G + VI+ + V A N + ++ KQ N + +N +L+ QA D S++
Sbjct: 237 GNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMIN---HLQEARQAKGYDNPSFL 293
Query: 300 QKMERDREAREK 265
+K++ D+E R+K
Sbjct: 294 RKLKADKEFRQK 305
>AB023163-1|BAA76790.1| 667|Homo sapiens KIAA0946 protein protein.
Length = 667
Score = 30.3 bits (65), Expect = 7.6
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = -1
Query: 480 GLSDVINAWILPNGAVIAVNFQVANSTQPLKQATNEYKLNSKFYLRYIEQAPVPDTASYI 301
G + VI+ + V A N + ++ KQ N + +N +L+ QA D S++
Sbjct: 271 GNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMIN---HLQEARQAKGYDNPSFL 327
Query: 300 QKMERDREAREK 265
+K++ D+E R+K
Sbjct: 328 RKLKADKEFRQK 339
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,809,866
Number of Sequences: 237096
Number of extensions: 1814740
Number of successful extensions: 3521
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3521
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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