Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11h02
(767 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 36 0.006
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 35 0.015
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 33 0.034
SPAC27F1.04c |nuf2||spindle pole body protein Nuf2|Schizosacchar... 32 0.078
SPBC1539.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 32 0.10
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 32 0.10
SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomy... 31 0.14
SPBC21.01 |mis17|SPBC776.19|kinetochore protein Mis17|Schizosacc... 31 0.24
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 29 0.97
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 28 1.7
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 28 1.7
SPAC29A4.11 |rga3||GTPase activating protein Rga3|Schizosaccharo... 28 1.7
SPAC31A2.06 |||conserved fungal protein|Schizosaccharomyces pomb... 28 1.7
SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 27 2.2
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 27 2.2
SPBC16E9.12c |pab2||poly|Schizosaccharomyces pombe|chr 2|||Manual 26 5.2
SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr 3|||Ma... 26 5.2
SPBC16C6.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 5.2
SPBC776.18c |pmh1|mcr1|transcription factor TFIIH complex subuni... 26 5.2
SPAC22E12.18 |||conserved fungal protein|Schizosaccharomyces pom... 26 5.2
SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 6.8
SPCC569.01c |||DUF1773 family protein 5|Schizosaccharomyces pomb... 26 6.8
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 26 6.8
SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2 |Schizosacch... 26 6.8
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 26 6.8
SPAC3H1.08c |||DUF1640 family protein|Schizosaccharomyces pombe|... 26 6.8
SPBC32F12.08c |duo1||DASH complex subunit Duo1 |Schizosaccharomy... 25 9.0
SPBC14F5.13c |||alkaline phosphatase |Schizosaccharomyces pombe|... 25 9.0
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 25 9.0
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 35.9 bits (79), Expect = 0.006
Identities = 43/203 (21%), Positives = 90/203 (44%), Gaps = 5/203 (2%)
Frame = -1
Query: 761 SSYREMEINLRNAAKSNESANDDISNEISECEKPLDSKIDCLRTDDTEICLNQ--NDVCK 588
+SY + L+ K NESA++ + + + D D ++I Q N+ +
Sbjct: 670 TSYYQKNTELQQLLKQNESASELLKSRNEKLCVDYDKLRSVFEEDSSKILSLQKENENLQ 729
Query: 587 HEVLVDNGKKPDILIAKDDAMKKLQERFLKIMNDVADLSDEKHRLEHIILQLQNETDTIC 408
++L + + L+ + L+ ++ + ++ D ++I + D
Sbjct: 730 SQIL----QISEELVDYRSRCEALEYGNYELETKLIEMHDRVEMQTNVIEASASALDV-- 783
Query: 407 EYVALYQQQRSLLKRRDEERSIQ---LNMFETECSKLKRQLEELTAILVKLSEDEDISSC 237
A+ + SL + RDE+ ++Q LN+ + E ++ +LE L + ++L + S
Sbjct: 784 SNTAILSFEDSLRRERDEKSTLQQKCLNL-QYEYENVRIELENLQSRALELESALEQSVS 842
Query: 236 LQKHSKNIEIEQIMKLLTNLNNN 168
K+SK I + KLL+++N N
Sbjct: 843 DAKYSKAIMQSGLSKLLSSINEN 865
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 34.7 bits (76), Expect = 0.015
Identities = 50/217 (23%), Positives = 98/217 (45%), Gaps = 3/217 (1%)
Frame = -1
Query: 767 LQSSYREMEINLRNAAKSNESANDDISNEISECEKPLDSKIDCLRTDDTEICLNQNDVCK 588
L++ E+E+ SNE DD+ N E L ++I+ R +ND +
Sbjct: 995 LKNKVSEVEVERNALLASNERLMDDLKNN-GENIASLQTEIEKKRA--------ENDDLQ 1045
Query: 587 HEVLVDNGKKPDILIAKDDAMKKLQERF--LK-IMNDVADLSDEKHRLEHIILQLQNETD 417
++ V + + ++L+ K L+++ LK I +V L DEK + + +L ++
Sbjct: 1046 SKLSVVSSEYENLLLISSQTNKSLEDKTNQLKYIEKNVQKLLDEKDQRNVELEELTSKYG 1105
Query: 416 TICEYVALYQQQRSLLKRRDEERSIQLNMFETECSKLKRQLEELTAILVKLSEDEDISSC 237
+ E A + + L+++ +++ F + + LE+LT ++E I S
Sbjct: 1106 KLGEENAQIKDELLALRKKSKKQHDLCANFVDDLKEKSDALEQLTN-----EKNELIVSL 1160
Query: 236 LQKHSKNIEIEQIMKLLTNLNNNSLIDPMKKSIDFKD 126
Q +S N E +++ ++L N + MKKS+ D
Sbjct: 1161 EQSNSNN---EALVEERSDLANR--LSDMKKSLSDSD 1192
Score = 31.1 bits (67), Expect = 0.18
Identities = 42/188 (22%), Positives = 81/188 (43%)
Frame = -1
Query: 764 QSSYREMEINLRNAAKSNESANDDISNEISECEKPLDSKIDCLRTDDTEICLNQNDVCKH 585
+ ++ E + S E ++ EI+E L+ + L T+ + NQ D
Sbjct: 1350 EKNFLRKEAEMTENIHSLEEGKEETKKEIAELSSRLED--NQLATNKLK---NQLDHLNQ 1404
Query: 584 EVLVDNGKKPDILIAKDDAMKKLQERFLKIMNDVADLSDEKHRLEHIILQLQNETDTICE 405
E+ + K D+L K+ + L+E + L D K+ LEH++ DT +
Sbjct: 1405 EIRL----KEDVLKEKESLIISLEESLSNQRQKESSLLDAKNELEHML------DDTSRK 1454
Query: 404 YVALYQQQRSLLKRRDEERSIQLNMFETECSKLKRQLEELTAILVKLSEDEDISSCLQKH 225
+L ++ S+ D ++S +L + L++ E LS E+I S LQ+
Sbjct: 1455 NSSLMEKIESINSSLD-DKSFELASAVEKLGALQKLHSE------SLSLMENIKSQLQEA 1507
Query: 224 SKNIEIEQ 201
+ I++++
Sbjct: 1508 KEKIQVDE 1515
Score = 26.2 bits (55), Expect = 5.2
Identities = 44/207 (21%), Positives = 83/207 (40%), Gaps = 13/207 (6%)
Frame = -1
Query: 737 NLRNAAKSNESANDDISNEISECEKPLDS-KIDCLRTDDTEICLNQNDVCKH----EVLV 573
NLR++ S ND I +++E K DS + + + + L H E+ +
Sbjct: 868 NLRSSLNVAISDNDQILTQLAELSKNYDSLEQESAQLNSGLKSLEAEKQLLHTENEELHI 927
Query: 572 DNGKKPDILIAKDDAMKKLQERFLKIMNDVADLSDEKHRLEHIILQLQNETDTICEYVAL 393
K L ++ L ++ ++++L +E I ++++ D +
Sbjct: 928 RLDKLTGKLKIEESKSSDLGKKLTARQEEISNLKEENMSQSQAITSVKSKLDETLSKSSK 987
Query: 392 YQQQRSLLKRRDEERSIQLNMF----ETECSKLKRQLEEL----TAILVKLSEDEDISSC 237
+ LK + E ++ N E LK E + T I K +E++D+ S
Sbjct: 988 LEADIEHLKNKVSEVEVERNALLASNERLMDDLKNNGENIASLQTEIEKKRAENDDLQSK 1047
Query: 236 LQKHSKNIEIEQIMKLLTNLNNNSLID 156
L S E E ++ L+++ N SL D
Sbjct: 1048 LSVVSS--EYENLL-LISSQTNKSLED 1071
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 33.5 bits (73), Expect = 0.034
Identities = 52/221 (23%), Positives = 97/221 (43%), Gaps = 10/221 (4%)
Frame = -1
Query: 761 SSYREM-EINLRNAAKSNESANDDISN---EISECEKPLDSKIDCLR--TDDTEICLNQN 600
S Y+ + E N++ + S++ + S +SE K DSK L D+ E+ + QN
Sbjct: 299 SKYKPIIEENMQELSNSDDICAEKESRLKLVLSEKAKLEDSKNSVLSFLKDENELFMKQN 358
Query: 599 DVCKHEVLVDNGKKPDILIAKDDAMKKLQ---ERFLKIMNDVADLSDEKHRLEHIILQLQ 429
+ + + KK + + KLQ E+F + D+++ ++E L +++
Sbjct: 359 QLYRTILYETRNKKTLVQNLLNSLEGKLQAHLEKFEQTERDISEKNEEVKSLREKAAKVK 418
Query: 428 NETDTICEYVALYQQQRSLLKRRDEERSIQLNMFETECSKLKRQLEELTAILVKLSEDED 249
N+ + + Y+QQ ++ QL + KLK+ +E A+ + SE E+
Sbjct: 419 NDCTSEKKTRQSYEQQTVKIEE-------QLKFLLNKEKKLKKSIE---ALSFEKSEAEN 468
Query: 248 ISSCLQKHSKNIEIEQIMKLLTNLNNNSL-IDPMKKSIDFK 129
S S+ + E I L L L +D ++KS+ K
Sbjct: 469 SLSSHDIDSQKLNSE-IADLSLRLQQEELSLDDIRKSLQGK 508
>SPAC27F1.04c |nuf2||spindle pole body protein
Nuf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 32.3 bits (70), Expect = 0.078
Identities = 35/162 (21%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Frame = -1
Query: 641 CLRTDDTEICLNQNDVCKHE--VLVDNGKKPDILIAKDDAMKKLQERFLKIMNDVAD-LS 471
CL+ E CL + D +H +L N + D + ++ +E+ LK +++ + L
Sbjct: 291 CLKV--LEECLVELDKLEHATVLLSTNQELCDQIEINKKKLEFRKEQLLKQLSNAQEKLE 348
Query: 470 DEKHRLEHIILQLQNETDTICEYVALYQQQRSLLKRRDEERSIQLNMFETECSKLKRQLE 291
E+H + + D I E + Q+R+ + E+++ + M E + + ++ +LE
Sbjct: 349 HEQHSRNQKLEAAKQRMDNIREEYKVITQERNKKIQETEKKNAMIEMTEQKIAGMREELE 408
Query: 290 ELTAILVKLSEDEDISSCLQKHSKNIEIEQIMKLLTNLNNNS 165
S+ I+ +K ++E+ I +LL NL +++
Sbjct: 409 ---------SQISSITMEFEKLKSHVEL-YIAELLRNLRSSN 440
>SPBC1539.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 386
Score = 31.9 bits (69), Expect = 0.10
Identities = 25/98 (25%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Frame = -1
Query: 734 LRNAAKSNESANDDISNEISECEKPLDSKIDCLRTDDTEICLNQNDVCKHEVLVDNGKKP 555
L ++ K + D + +++E E + L + +I L N K+ +++NGKK
Sbjct: 146 LSSSEKEVDEEADKLLEKVAE-ESSHPESVSILE-EKKKIPLYPNGQPKYRKILENGKKV 203
Query: 554 DILIAKD-DAMKKLQERFLKIMNDVADLSDEKHRLEHI 444
L+ ++ + +K+L ++ K+ ND L +E HR E +
Sbjct: 204 KYLLDENGEILKRLVKKEKKLKNDNERLENE-HRTEKL 240
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 31.9 bits (69), Expect = 0.10
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 9/123 (7%)
Frame = -1
Query: 536 DDAMKKLQERFLKIMNDVA-DLSDEKHRLEHIILQLQNETDTICEYVALYQQ-------Q 381
++A++K+Q + ++ D S+++ E+ I QLQN D + E + + Q +
Sbjct: 255 ENALEKVQREKDSLSTEMEEDKSNKEVDYEYEIRQLQNRLDELSEELDVAQDLLTEKEDE 314
Query: 380 RSLLKRRDEERSIQLNMFETECSKLKRQLEELTAIL-VKLSEDEDISSCLQKHSKNIEIE 204
+ LKR+ EE+ + FE E + L+E AIL K E D L + +
Sbjct: 315 IATLKRQIEEKENSSSAFENEENSSYVHLQEDYAILQAKCDEFADRIQVLTADLEKEKEN 374
Query: 203 QIM 195
QIM
Sbjct: 375 QIM 377
>SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 523
Score = 31.5 bits (68), Expect = 0.14
Identities = 27/111 (24%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Frame = -1
Query: 680 ISECEKPLDSKIDCLRT--DDTEICLNQ---NDVCKH-EVLVDNGKKPDILIAKDDAMKK 519
I++ E+P+DS D LRT D + L Q + H E L+D+ + +++ D + +
Sbjct: 402 ITKQEEPIDSIYDILRTAWDTSTPRLEQYASEYMANHLEHLIDDPEFCELVKESADRILQ 461
Query: 518 LQER-FLKIMNDVADLSDEKHRLEHIILQLQNETDTICEYVALYQQQRSLL 369
QE +++++D+ ++ + H L + DT+ Y + Y Q+ ++
Sbjct: 462 RQETDTIELIDDIRYFLSKRFGIYHEDLCIDGVVDTLTPYESEYNQKMEMI 512
>SPBC21.01 |mis17|SPBC776.19|kinetochore protein
Mis17|Schizosaccharomyces pombe|chr 2|||Manual
Length = 441
Score = 30.7 bits (66), Expect = 0.24
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Frame = -1
Query: 530 AMKKLQERFLKIMNDVADLSDEKHRLEHIILQLQNETDTICEYVALYQQQRSLLKRRDEE 351
A KK L + D++ L +++ ++ +QL+NE Y+ L QQ L D+
Sbjct: 329 ACKKAANEKLAVQRDLSKLREDRLSVQRKKIQLRNE------YIKLSHQQNFL----DD- 377
Query: 350 RSIQLNMFETECSKLKRQLEELTAILVKLSEDEDISSCLQKHSKNIEIE-QIMKL 189
++ F ++C +K +LE +T +I+ SKN +E Q+++L
Sbjct: 378 ----IDDFFSQCETVKNELENVTTTPNSTEAFSEINEYASALSKNYGLESQLVEL 428
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 28.7 bits (61), Expect = 0.97
Identities = 19/89 (21%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = -1
Query: 728 NAAKSNESANDDISNEISECEKPLDSKI-DCLRTDDTEICLNQNDVCKHEVLVDNGKKPD 552
N +E N D+ E+++ + L + + + L + E L + + +E N +
Sbjct: 3972 NENSDSEEENQDLDEEVNDIPEDLSNSLNEKLWDEPNEEDLLETEQKSNEQSAANNESD- 4030
Query: 551 ILIAKDDAMKKLQERFLKIMNDVADLSDE 465
L++K+D K L+++ + D ++SD+
Sbjct: 4031 -LVSKEDDNKALEDKDRQEKEDEEEMSDD 4058
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 27.9 bits (59), Expect = 1.7
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -1
Query: 356 EERSIQLNMFETECSKLKRQLEELTAILVKLSEDEDISSCLQKHS-KNIEIEQIMKLLTN 180
EE Q + E E LK + L KLS ++ S +++H ++E IM+ L N
Sbjct: 122 EELERQAELIEAEAESLKATFKRGKKDLSKLSHLSELESRIERHKWHQDKLELIMRRLEN 181
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 27.9 bits (59), Expect = 1.7
Identities = 20/95 (21%), Positives = 43/95 (45%)
Frame = -1
Query: 719 KSNESANDDISNEISECEKPLDSKIDCLRTDDTEICLNQNDVCKHEVLVDNGKKPDILIA 540
++NE+ +D+ N + ++ D+KI + LN + + ++ + L
Sbjct: 89 ETNETQQEDLLNTL--LQQMEDTKITTAEKSSVQSSLNTKENTPQQPKKSRNRQKERLER 146
Query: 539 KDDAMKKLQERFLKIMNDVADLSDEKHRLEHIILQ 435
+ MKK+ E+ +ADL +E+ + IL+
Sbjct: 147 RKAEMKKMSEQAELESEKMADLKNEEKKKFSKILE 181
>SPAC29A4.11 |rga3||GTPase activating protein
Rga3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 969
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = -1
Query: 326 ETECSKLKRQLEELTAILVKLSEDEDISSCLQKHSKNIEIE 204
+++ +L+ QLE LTA+ KLS E +SS +SK I E
Sbjct: 453 DSDVEELREQLENLTALTKKLS--ERLSSSTFDNSKFIRTE 491
>SPAC31A2.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 27.9 bits (59), Expect = 1.7
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 5/113 (4%)
Frame = -1
Query: 431 QNETDTICEYVALYQQQRSLLKRRDEERSIQLNMFET--ECSKLKRQLEELTAILVKLSE 258
QN T T+ +Y ++ Q + + L++FE + S L+ +++ + ++
Sbjct: 292 QNLTSTLEKYKKMHLQNPN-----NFSLDFTLSIFERLRKDSSLQLTTKDINTLFSTIAL 346
Query: 257 DEDISSCLQKHSKNIEIEQIMKL---LTNLNNNSLIDPMKKSIDFKDFYPCSC 108
S KHSKN+ E+++ L +L + ID + F F CSC
Sbjct: 347 SPTKLSMASKHSKNLVSERMLYLSLMYKSLVDLKTIDSFSLKLLFLKFMICSC 399
>SPAC20G8.10c ||SPAC3A12.01c|beclin family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 464
Score = 27.5 bits (58), Expect = 2.2
Identities = 14/75 (18%), Positives = 38/75 (50%)
Frame = -1
Query: 515 QERFLKIMNDVADLSDEKHRLEHIILQLQNETDTICEYVALYQQQRSLLKRRDEERSIQL 336
+E + +++ +L + + E I ++ +ETD + + + +++ + ++E L
Sbjct: 182 EENTAALDSEIDELMKQINEKEEKIEEISDETDKLQKLLRELDEEKEKVYAEEQEFYNNL 241
Query: 335 NMFETECSKLKRQLE 291
N F+ + L+RQ +
Sbjct: 242 NQFQIKKLSLERQYD 256
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 27.5 bits (58), Expect = 2.2
Identities = 18/75 (24%), Positives = 28/75 (37%)
Frame = -1
Query: 335 NMFETECSKLKRQLEELTAILVKLSEDEDISSCLQKHSKNIEIEQIMKLLTNLNNNSLID 156
N+ T C K E++ L + DEDI+ +Q I + + N L
Sbjct: 245 NIISTACVKDDESCEKIRLTLENTNIDEDITQMIQNEGTGTTIPPLPEFNDYFKENGLNY 304
Query: 155 PMKKSIDFKDFYPCS 111
+ + I YP S
Sbjct: 305 DIDQLISKAPSYPYS 319
>SPBC16E9.12c |pab2||poly|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 26.2 bits (55), Expect = 5.2
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = -1
Query: 545 IAKDDAMKKLQERFLKIMNDVADLSDEKHRLEHIILQLQNETDTI 411
++ DA+ ++ L++ VA++ E +L + QL NET+ +
Sbjct: 1 MSDQDALDTQEKELLEMKERVAEMEAEAAKLRAMQEQLDNETEAL 45
>SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr
3|||Manual
Length = 462
Score = 26.2 bits (55), Expect = 5.2
Identities = 17/87 (19%), Positives = 38/87 (43%)
Frame = -1
Query: 434 LQNETDTICEYVALYQQQRSLLKRRDEERSIQLNMFETECSKLKRQLEELTAILVKLSED 255
L++E+ + C Y+A L R S++ CS ++ + + + E+
Sbjct: 112 LKSESSSTCGYLARQAHNFLLQCFRSNVSSLRGQKVHEHCSSTEKGDDAILDCCIYYQEE 171
Query: 254 EDISSCLQKHSKNIEIEQIMKLLTNLN 174
+ I + L KN+ I+ + + +L+
Sbjct: 172 KLIPAVLLSDDKNLSIKAAVHHIQSLS 198
>SPBC16C6.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 350
Score = 26.2 bits (55), Expect = 5.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 701 NDDISNEISECEKPLDSKIDCLRTDDTE 618
N +S+E E PLDS++ + DDTE
Sbjct: 57 NYSMSDETDESMFPLDSELTDMEDDDTE 84
>SPBC776.18c |pmh1|mcr1|transcription factor TFIIH complex subunit
Pmh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 318
Score = 26.2 bits (55), Expect = 5.2
Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Frame = -1
Query: 728 NAAKSNESANDDISNEISECEKPLDSKIDCLRTDDTEICLNQNDVCKHEVLVD---NGKK 558
N+A++ A NEI + +++ +R E + + + +++ D +GK
Sbjct: 146 NSARAAAEARILAQNEILLKRQKQEAREAAIREHQKE--KERREQVEQQIIFDLATSGKD 203
Query: 557 PDILIAKDDAMKKLQERFLKIMNDVADLSDEKHRLEHIILQLQNET 420
P+ +I D++KK QE I + V+++S L + Q+ +T
Sbjct: 204 PNKIIQLSDSLKKQQE---NIASSVSNISRSSSILLSDVQQVAEDT 246
>SPAC22E12.18 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 336
Score = 26.2 bits (55), Expect = 5.2
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -1
Query: 734 LRNAAKSNESANDDISNEISECEKPLDSKIDCLRTDDTEIC 612
L NAAK + DDI +I E ++ ++++D +C
Sbjct: 267 LFNAAKQTSDSIDDIVAQIQEDDENFENELDNFHRSARNLC 307
>SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 689
Score = 25.8 bits (54), Expect = 6.8
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +2
Query: 47 NDFYYVSLKKYIIFP*VFQNNNCKDKNL*NQYFSSWDRLKN 169
NDF+ ++ Y + V +NNC ++ ++ S+W + K+
Sbjct: 33 NDFFKITATTYALINSVIVSNNCCNR----RFHSTWQKKKH 69
>SPCC569.01c |||DUF1773 family protein 5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 323
Score = 25.8 bits (54), Expect = 6.8
Identities = 22/129 (17%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
Frame = -1
Query: 533 DAMK-KLQERFLKIMNDVADLSDEKHRLEHIILQLQNETDTICEYVALYQQQRSLLKRRD 357
DAM+ ++ RF + N++ + E ++ +++++ ET + + L +Q+ +
Sbjct: 127 DAMQNEMNSRFDAVQNEMTSMKGEMAEMKVEMVEMKRETIRLNTRIDLLEQKTEARFQSI 186
Query: 356 EERSIQLNMFETECSKLKRQLEELTAILVKLSEDEDISSCLQKHSKNIEIEQIMKLLTNL 177
E+R N + + + R+ + + L S D+ + + + ++I + + ++ T
Sbjct: 187 EQR---FNSIDQRFNSIDRRFDSMEQRLD--SMDQKMETIDARSCRSIMLTRKLENTTRS 241
Query: 176 NNNSLIDPM 150
+ L P+
Sbjct: 242 DQGYLASPV 250
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 25.8 bits (54), Expect = 6.8
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +1
Query: 124 KSLKSILFFMGSIKELLFKFVRSFIICSISIFLEC 228
KS + + + S L +F S IC++ +F++C
Sbjct: 318 KSFSFLAYLLRSFGAALKQFESSIPICTLQLFMDC 352
>SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2176
Score = 25.8 bits (54), Expect = 6.8
Identities = 24/102 (23%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Frame = -1
Query: 695 DISNEISECEKPLDSKIDCLRTDDTEICLNQNDVCKHEVLVDNGKKPDILIAKDDAMKKL 516
++ N S+ P + ++ L T D++ L + + + +++V +K DI+ K + + +
Sbjct: 589 EMVNNFSKRLTPYNIRVAEL-TGDSQ--LTKQQISETQIIVTTPEKWDIITRKANDLSYV 645
Query: 515 QERFLKIMNDVADLSDEKHR-LEHIILQLQNETDTICEYVAL 393
L I+++V L DE+ LE I+ ++ + E V L
Sbjct: 646 NLVRLVIIDEVHLLHDERGPVLESIVARIFRHQEETLEQVRL 687
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 25.8 bits (54), Expect = 6.8
Identities = 22/103 (21%), Positives = 45/103 (43%)
Frame = -1
Query: 557 PDILIAKDDAMKKLQERFLKIMNDVADLSDEKHRLEHIILQLQNETDTICEYVALYQQQR 378
PD AK++ +KLQ+ + + + DL + + +H + L N D + ++
Sbjct: 213 PDAQKAKEETKQKLQDLYEEFKSVAVDLQGDP-KYQHPVRSLLNLIDKFIDKLSEQSGNV 271
Query: 377 SLLKRRDEERSIQLNMFETECSKLKRQLEELTAILVKLSEDED 249
+ +R++Q E + L R L+ L L ++ D +
Sbjct: 272 TADTNEHYDRAMQYLKQLVE-NILNRSLDNLIDTLKQVQHDAE 313
>SPAC3H1.08c |||DUF1640 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 25.8 bits (54), Expect = 6.8
Identities = 16/64 (25%), Positives = 32/64 (50%)
Frame = -1
Query: 392 YQQQRSLLKRRDEERSIQLNMFETECSKLKRQLEELTAILVKLSEDEDISSCLQKHSKNI 213
+QQ+R+ L+ R +I+ N F+ + + E+ K S ED+ + L + N+
Sbjct: 89 FQQKRTFLQIRKYLETIEENEFDKVRKSSDKLINEIEK--TKSSLREDVKTALSEVRLNL 146
Query: 212 EIEQ 201
+E+
Sbjct: 147 NLEK 150
>SPBC32F12.08c |duo1||DASH complex subunit Duo1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 166
Score = 25.4 bits (53), Expect = 9.0
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 389 QQQRSLLKRRDEERSIQLNMFETECSKLKRQLEELTAI 276
Q Q+ L + +E+R I+L + + +RQ EE A+
Sbjct: 83 QHQKMLQIQAEEQRKIELQQEQERLEQERRQKEEAIAL 120
>SPBC14F5.13c |||alkaline phosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 532
Score = 25.4 bits (53), Expect = 9.0
Identities = 12/46 (26%), Positives = 28/46 (60%)
Frame = -1
Query: 284 TAILVKLSEDEDISSCLQKHSKNIEIEQIMKLLTNLNNNSLIDPMK 147
TA+ V + +++ L+ + +NIEI Q M++ N++ + + + +K
Sbjct: 457 TAVDVNVYGVGEVTEHLRGNMENIEIGQFMEIYLNVSLSDVTEKLK 502
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 25.4 bits (53), Expect = 9.0
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = -1
Query: 722 AKSNESANDDISNEISE---CEKPLDSKIDC 639
A NES+ DD N+ SE KPL++ C
Sbjct: 176 ALENESSRDDFVNDFSEPLLLSKPLNNTSSC 206
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,908,403
Number of Sequences: 5004
Number of extensions: 61604
Number of successful extensions: 223
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 369323696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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