Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11g11
(647 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032797-1|AAH32797.1| 247|Homo sapiens non-SMC element 2, MMS2... 76 9e-14
AK057002-1|BAB71338.1| 247|Homo sapiens protein ( Homo sapiens ... 76 9e-14
Z93024-4|CAI18792.1| 2253|Homo sapiens polycystic kidney disease... 33 1.2
EF517278-1|ABR22603.1| 2255|Homo sapiens PKDREJ protein. 33 1.2
AL078611-3|CAI18766.1| 2253|Homo sapiens polycystic kidney disea... 33 1.2
AL031034-1|CAI18795.1| 2253|Homo sapiens polycystic kidney disea... 33 1.2
AF116458-1|AAD18021.1| 2253|Homo sapiens polycystic kidney disea... 33 1.2
CR457150-1|CAG33431.1| 245|Homo sapiens RNF138 protein. 32 1.5
BT006878-1|AAP35524.1| 245|Homo sapiens STRIN protein protein. 32 1.5
BC018107-1|AAH18107.1| 245|Homo sapiens ring finger protein 138... 32 1.5
AF162680-1|AAD46623.2| 245|Homo sapiens HSD-4 protein protein. 32 1.5
AL353807-3|CAI13211.2| 2964|Homo sapiens ash1 (absent, small, or... 32 2.0
AL353807-2|CAI13212.1| 2969|Homo sapiens ash1 (absent, small, or... 32 2.0
AL139410-7|CAI12716.2| 2964|Homo sapiens ash1 (absent, small, or... 32 2.0
AL139410-6|CAI12722.1| 2969|Homo sapiens ash1 (absent, small, or... 32 2.0
AF257305-1|AAF68983.1| 2969|Homo sapiens ASH1 protein. 32 2.0
AB209068-1|BAD92305.1| 636|Homo sapiens ash1 (absent, small, or... 32 2.0
AB037841-1|BAA92658.1| 1349|Homo sapiens KIAA1420 protein protein. 32 2.0
BC038225-1|AAH38225.1| 1101|Homo sapiens structural maintenance ... 31 2.7
BC029520-1|AAH29520.1| 384|Homo sapiens WDSUB1 protein protein. 31 2.7
AY235683-1|AAP13542.1| 1067|Homo sapiens PIAS-like protein hZimp... 31 2.7
AL391665-1|CAI40993.2| 1067|Homo sapiens zinc finger, MIZ-type c... 31 2.7
AL162390-1|CAH73243.1| 1101|Homo sapiens structural maintenance ... 31 2.7
AK093494-1|BAC04184.1| 476|Homo sapiens protein ( Homo sapiens ... 31 2.7
AJ310550-1|CAC39247.1| 1101|Homo sapiens SMC5 protein protein. 31 2.7
AC009307-1|AAX93043.1| 219|Homo sapiens unknown protein. 31 2.7
AB033050-1|BAA86538.2| 997|Homo sapiens KIAA1224 protein protein. 31 2.7
AB011166-1|BAA25520.2| 1120|Homo sapiens KIAA0594 protein protein. 31 2.7
U72066-1|AAC14371.1| 897|Homo sapiens CtBP interacting protein ... 30 8.2
BC066363-1|AAH66363.1| 1805|Homo sapiens SDK2 protein protein. 30 8.2
BC045763-1|AAH45763.1| 1329|Homo sapiens SDK2 protein protein. 30 8.2
BC030590-1|AAH30590.1| 902|Homo sapiens RBBP8 protein protein. 30 8.2
AL137357-1|CAB70709.1| 1185|Homo sapiens hypothetical protein pr... 30 8.2
AK001694-1|BAA91841.1| 574|Homo sapiens protein ( Homo sapiens ... 30 8.2
AF043431-1|AAC34368.1| 897|Homo sapiens retinoblastoma-interact... 30 8.2
>BC032797-1|AAH32797.1| 247|Homo sapiens non-SMC element 2, MMS21
homolog (S. cerevisiae) protein.
Length = 247
Score = 76.2 bits (179), Expect = 9e-14
Identities = 40/107 (37%), Positives = 67/107 (62%), Gaps = 5/107 (4%)
Frame = -2
Query: 340 RYMQELKT-RYESGLQSVSSSGLTENLNESDIAIVQTNEQFLDPITKKHISDPVKNTMCG 164
++ Q+LK + + GLQ+ + TE ++E DI + Q+ F PITK+ + PVKN +CG
Sbjct: 128 QFKQQLKELKKQCGLQADREADGTEGVDE-DIIVTQSQTNFTCPITKEEMKKPVKNKVCG 186
Query: 163 HVYERETILNLI----RRKHRIRCPVAGCANPESIQENHLLEDEELR 35
H YE + I+ +I +RK + CP GC++ + I+++ L++DE LR
Sbjct: 187 HTYEEDAIVRMIESRQKRKKKAYCPQIGCSHTD-IRKSDLIQDEALR 232
>AK057002-1|BAB71338.1| 247|Homo sapiens protein ( Homo sapiens
cDNA FLJ32440 fis, clone SKMUS2001492. ).
Length = 247
Score = 76.2 bits (179), Expect = 9e-14
Identities = 40/107 (37%), Positives = 67/107 (62%), Gaps = 5/107 (4%)
Frame = -2
Query: 340 RYMQELKT-RYESGLQSVSSSGLTENLNESDIAIVQTNEQFLDPITKKHISDPVKNTMCG 164
++ Q+LK + + GLQ+ + TE ++E DI + Q+ F PITK+ + PVKN +CG
Sbjct: 128 QFKQQLKELKKQCGLQADREADGTEGVDE-DIIVTQSQTNFTCPITKEEMKKPVKNKVCG 186
Query: 163 HVYERETILNLI----RRKHRIRCPVAGCANPESIQENHLLEDEELR 35
H YE + I+ +I +RK + CP GC++ + I+++ L++DE LR
Sbjct: 187 HTYEEDAIVRMIESRQKRKKKAYCPQIGCSHTD-IRKSDLIQDEALR 232
>Z93024-4|CAI18792.1| 2253|Homo sapiens polycystic kidney disease
(polycystin) and REJ homolog (sperm receptor for egg
protein.
Length = 2253
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 83 IGTSRNWTSDSMLPSYEIQNSLSFIHMATHCILHWI*YMF 202
+G + +WT LP EI+NS FIH+ + L W Y+F
Sbjct: 267 VGQAPDWTQPLDLPQLEIRNSPLFIHIPNNS-LQWGVYVF 305
>EF517278-1|ABR22603.1| 2255|Homo sapiens PKDREJ protein.
Length = 2255
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 83 IGTSRNWTSDSMLPSYEIQNSLSFIHMATHCILHWI*YMF 202
+G + +WT LP EI+NS FIH+ + L W Y+F
Sbjct: 267 VGQAPDWTQPLDLPQLEIRNSPLFIHIPNNS-LQWGVYVF 305
>AL078611-3|CAI18766.1| 2253|Homo sapiens polycystic kidney disease
(polycystin) and REJ homolog (sperm receptor for egg
protein.
Length = 2253
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 83 IGTSRNWTSDSMLPSYEIQNSLSFIHMATHCILHWI*YMF 202
+G + +WT LP EI+NS FIH+ + L W Y+F
Sbjct: 267 VGQAPDWTQPLDLPQLEIRNSPLFIHIPNNS-LQWGVYVF 305
>AL031034-1|CAI18795.1| 2253|Homo sapiens polycystic kidney disease
(polycystin) and REJ homolog (sperm receptor for egg
protein.
Length = 2253
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 83 IGTSRNWTSDSMLPSYEIQNSLSFIHMATHCILHWI*YMF 202
+G + +WT LP EI+NS FIH+ + L W Y+F
Sbjct: 267 VGQAPDWTQPLDLPQLEIRNSPLFIHIPNNS-LQWGVYVF 305
>AF116458-1|AAD18021.1| 2253|Homo sapiens polycystic kidney disease
and receptor for egg jelly related protein protein.
Length = 2253
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 83 IGTSRNWTSDSMLPSYEIQNSLSFIHMATHCILHWI*YMF 202
+G + +WT LP EI+NS FIH+ + L W Y+F
Sbjct: 267 VGQAPDWTQPLDLPQLEIRNSPLFIHIPNNS-LQWGVYVF 305
>CR457150-1|CAG33431.1| 245|Homo sapiens RNF138 protein.
Length = 245
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -2
Query: 235 TNEQFLDPITKKHISDPVKNTMCGHVYERETILNLIRRKHRIRCPV 98
T + F P+ ++ + PV+ T C HV+ R+ L + R+ CP+
Sbjct: 12 TEDDFYCPVCQEVLKTPVRTTACQHVFCRKCFLTAM-RESGAHCPL 56
>BT006878-1|AAP35524.1| 245|Homo sapiens STRIN protein protein.
Length = 245
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -2
Query: 235 TNEQFLDPITKKHISDPVKNTMCGHVYERETILNLIRRKHRIRCPV 98
T + F P+ ++ + PV+ T C HV+ R+ L + R+ CP+
Sbjct: 12 TEDDFYCPVCQEVLKTPVRTTACQHVFCRKCFLTAM-RESGAHCPL 56
>BC018107-1|AAH18107.1| 245|Homo sapiens ring finger protein 138
protein.
Length = 245
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -2
Query: 235 TNEQFLDPITKKHISDPVKNTMCGHVYERETILNLIRRKHRIRCPV 98
T + F P+ ++ + PV+ T C HV+ R+ L + R+ CP+
Sbjct: 12 TEDDFYCPVCQEVLKTPVRTTACQHVFCRKCFLTAM-RESGAHCPL 56
>AF162680-1|AAD46623.2| 245|Homo sapiens HSD-4 protein protein.
Length = 245
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -2
Query: 235 TNEQFLDPITKKHISDPVKNTMCGHVYERETILNLIRRKHRIRCPV 98
T + F P+ ++ + PV+ T C HV+ R+ L + R+ CP+
Sbjct: 12 TEDDFYCPVCQEVLKTPVRTTACQHVFCRKCFLTAM-RESGAHCPL 56
>AL353807-3|CAI13211.2| 2964|Homo sapiens ash1 (absent, small, or
homeotic)-like (Drosophila) protein.
Length = 2964
Score = 31.9 bits (69), Expect = 2.0
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 5/111 (4%)
Frame = -2
Query: 421 SNINTL-QERFEDGLKTLSQNRINPNSHRYMQELKTRYESGLQSVSSSGLTENLNESDIA 245
S I TL ++ G + LS + PNS ++ EL + E+ +S S E + SD
Sbjct: 1144 SMIQTLAMKKASKGRRRLSPPTLLPNSPSHLSELTSLKEATPSPISESHSDETI-PSDSG 1202
Query: 244 IVQTNEQFLDPITKKHISDPVKNTMCGHVY----ERETILNLIRRKHRIRC 104
I N D +K + HV E T+L+ ++ KH+ +C
Sbjct: 1203 IGTDNNSTSDR-AEKFCGQKKRRHSFEHVSLIPPETSTVLSSLKEKHKHKC 1252
>AL353807-2|CAI13212.1| 2969|Homo sapiens ash1 (absent, small, or
homeotic)-like (Drosophila) protein.
Length = 2969
Score = 31.9 bits (69), Expect = 2.0
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 5/111 (4%)
Frame = -2
Query: 421 SNINTL-QERFEDGLKTLSQNRINPNSHRYMQELKTRYESGLQSVSSSGLTENLNESDIA 245
S I TL ++ G + LS + PNS ++ EL + E+ +S S E + SD
Sbjct: 1144 SMIQTLAMKKASKGRRRLSPPTLLPNSPSHLSELTSLKEATPSPISESHSDETI-PSDSG 1202
Query: 244 IVQTNEQFLDPITKKHISDPVKNTMCGHVY----ERETILNLIRRKHRIRC 104
I N D +K + HV E T+L+ ++ KH+ +C
Sbjct: 1203 IGTDNNSTSDR-AEKFCGQKKRRHSFEHVSLIPPETSTVLSSLKEKHKHKC 1252
>AL139410-7|CAI12716.2| 2964|Homo sapiens ash1 (absent, small, or
homeotic)-like (Drosophila) protein.
Length = 2964
Score = 31.9 bits (69), Expect = 2.0
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 5/111 (4%)
Frame = -2
Query: 421 SNINTL-QERFEDGLKTLSQNRINPNSHRYMQELKTRYESGLQSVSSSGLTENLNESDIA 245
S I TL ++ G + LS + PNS ++ EL + E+ +S S E + SD
Sbjct: 1144 SMIQTLAMKKASKGRRRLSPPTLLPNSPSHLSELTSLKEATPSPISESHSDETI-PSDSG 1202
Query: 244 IVQTNEQFLDPITKKHISDPVKNTMCGHVY----ERETILNLIRRKHRIRC 104
I N D +K + HV E T+L+ ++ KH+ +C
Sbjct: 1203 IGTDNNSTSDR-AEKFCGQKKRRHSFEHVSLIPPETSTVLSSLKEKHKHKC 1252
>AL139410-6|CAI12722.1| 2969|Homo sapiens ash1 (absent, small, or
homeotic)-like (Drosophila) protein.
Length = 2969
Score = 31.9 bits (69), Expect = 2.0
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 5/111 (4%)
Frame = -2
Query: 421 SNINTL-QERFEDGLKTLSQNRINPNSHRYMQELKTRYESGLQSVSSSGLTENLNESDIA 245
S I TL ++ G + LS + PNS ++ EL + E+ +S S E + SD
Sbjct: 1144 SMIQTLAMKKASKGRRRLSPPTLLPNSPSHLSELTSLKEATPSPISESHSDETI-PSDSG 1202
Query: 244 IVQTNEQFLDPITKKHISDPVKNTMCGHVY----ERETILNLIRRKHRIRC 104
I N D +K + HV E T+L+ ++ KH+ +C
Sbjct: 1203 IGTDNNSTSDR-AEKFCGQKKRRHSFEHVSLIPPETSTVLSSLKEKHKHKC 1252
>AF257305-1|AAF68983.1| 2969|Homo sapiens ASH1 protein.
Length = 2969
Score = 31.9 bits (69), Expect = 2.0
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 5/111 (4%)
Frame = -2
Query: 421 SNINTL-QERFEDGLKTLSQNRINPNSHRYMQELKTRYESGLQSVSSSGLTENLNESDIA 245
S I TL ++ G + LS + PNS ++ EL + E+ +S S E + SD
Sbjct: 1144 SMIQTLAMKKASKGRRRLSPPTLLPNSPSHLSELTSLKEATPSPISESHSDETI-PSDSG 1202
Query: 244 IVQTNEQFLDPITKKHISDPVKNTMCGHVY----ERETILNLIRRKHRIRC 104
I N D +K + HV E T+L+ ++ KH+ +C
Sbjct: 1203 IGTDNNSTSDR-AEKFCGQKKRRHSFEHVSLIPPETSTVLSSLKEKHKHKC 1252
>AB209068-1|BAD92305.1| 636|Homo sapiens ash1 (absent, small, or
homeotic)-like variant protein.
Length = 636
Score = 31.9 bits (69), Expect = 2.0
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 5/111 (4%)
Frame = -2
Query: 421 SNINTL-QERFEDGLKTLSQNRINPNSHRYMQELKTRYESGLQSVSSSGLTENLNESDIA 245
S I TL ++ G + LS + PNS ++ EL + E+ +S S E + SD
Sbjct: 435 SMIQTLAMKKASKGRRRLSPPTLLPNSPSHLSELTSLKEATPSPISESHSDETI-PSDSG 493
Query: 244 IVQTNEQFLDPITKKHISDPVKNTMCGHVY----ERETILNLIRRKHRIRC 104
I N D +K + HV E T+L+ ++ KH+ +C
Sbjct: 494 IGTDNNSTSDR-AEKFCGQKKRRHSFEHVSLIPPETSTVLSSLKEKHKHKC 543
>AB037841-1|BAA92658.1| 1349|Homo sapiens KIAA1420 protein protein.
Length = 1349
Score = 31.9 bits (69), Expect = 2.0
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 5/111 (4%)
Frame = -2
Query: 421 SNINTL-QERFEDGLKTLSQNRINPNSHRYMQELKTRYESGLQSVSSSGLTENLNESDIA 245
S I TL ++ G + LS + PNS ++ EL + E+ +S S E + SD
Sbjct: 1148 SMIQTLAMKKASKGRRRLSPPTLLPNSPSHLSELTSLKEATPSPISESHSDETI-PSDSG 1206
Query: 244 IVQTNEQFLDPITKKHISDPVKNTMCGHVY----ERETILNLIRRKHRIRC 104
I N D +K + HV E T+L+ ++ KH+ +C
Sbjct: 1207 IGTDNNSTSDR-AEKFCGQKKRRHSFEHVSLIPPETSTVLSSLKEKHKHKC 1256
>BC038225-1|AAH38225.1| 1101|Homo sapiens structural maintenance of
chromosomes 5 protein.
Length = 1101
Score = 31.5 bits (68), Expect = 2.7
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = -2
Query: 400 ERFEDGLKTLSQNRINPNSHRYMQELKTRYESGLQSVSSSGL----TENLNESDIAIVQT 233
E ED K + R+ S + EL ++SG + S+ L + LN +V
Sbjct: 961 ENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPFRVVDE 1020
Query: 232 NEQFLDPITKKHISDPVKNTMC 167
Q +DPI ++ + + V NT C
Sbjct: 1021 INQGMDPINERRVFEMVVNTAC 1042
>BC029520-1|AAH29520.1| 384|Homo sapiens WDSUB1 protein protein.
Length = 384
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = -2
Query: 229 EQFLDPITKKHISDPVKNTMCGHVYERETILNLIRRKHRIRCPVAGCANPESI 71
++F+ PIT++ + DPV G+ YE+E + N I +K R P+ P ++
Sbjct: 314 DEFICPITRELMKDPV-IASDGYSYEKEAMENWISKKKR-TSPMTNLVLPSAV 364
>AY235683-1|AAP13542.1| 1067|Homo sapiens PIAS-like protein hZimp10
protein.
Length = 1067
Score = 31.5 bits (68), Expect = 2.7
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 2/127 (1%)
Frame = -2
Query: 382 LKTLSQNRINPNSHRYMQELKTRYESGLQSVSSSGLTENLNESDIAIVQTNEQFLDPITK 203
L+ L + R+ P H + ++K + S +SSG T E + PIT
Sbjct: 691 LQGLLKKRLLPAEH-CITKIKRNFSS---VAASSGNTTLNGEDGVEQTAIKVSLKCPITF 746
Query: 202 KHISDPVKNTMCGHV--YERETILNLIRRKHRIRCPVAGCANPESIQENHLLEDEELRFR 29
+ I P + C HV ++ E+ L L + RCPV N ++ E L D+ +
Sbjct: 747 RRIQLPARGHDCKHVQCFDLESYLQLNCERGTWRCPV---CNKTALLEG-LEVDQYMWGI 802
Query: 28 LSLSQHS 8
L+ QHS
Sbjct: 803 LNAIQHS 809
>AL391665-1|CAI40993.2| 1067|Homo sapiens zinc finger, MIZ-type
containing 1 protein.
Length = 1067
Score = 31.5 bits (68), Expect = 2.7
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 2/127 (1%)
Frame = -2
Query: 382 LKTLSQNRINPNSHRYMQELKTRYESGLQSVSSSGLTENLNESDIAIVQTNEQFLDPITK 203
L+ L + R+ P H + ++K + S +SSG T E + PIT
Sbjct: 691 LQGLLKKRLLPAEH-CITKIKRNFSS---VAASSGNTTLNGEDGVEQTAIKVSLKCPITF 746
Query: 202 KHISDPVKNTMCGHV--YERETILNLIRRKHRIRCPVAGCANPESIQENHLLEDEELRFR 29
+ I P + C HV ++ E+ L L + RCPV N ++ E L D+ +
Sbjct: 747 RRIQLPARGHDCKHVQCFDLESYLQLNCERGTWRCPV---CNKTALLEG-LEVDQYMWGI 802
Query: 28 LSLSQHS 8
L+ QHS
Sbjct: 803 LNAIQHS 809
>AL162390-1|CAH73243.1| 1101|Homo sapiens structural maintenance of
chromosomes 5 protein.
Length = 1101
Score = 31.5 bits (68), Expect = 2.7
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = -2
Query: 400 ERFEDGLKTLSQNRINPNSHRYMQELKTRYESGLQSVSSSGL----TENLNESDIAIVQT 233
E ED K + R+ S + EL ++SG + S+ L + LN +V
Sbjct: 961 ENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPFRVVDE 1020
Query: 232 NEQFLDPITKKHISDPVKNTMC 167
Q +DPI ++ + + V NT C
Sbjct: 1021 INQGMDPINERRVFEMVVNTAC 1042
>AK093494-1|BAC04184.1| 476|Homo sapiens protein ( Homo sapiens
cDNA FLJ36175 fis, clone TESTI2026453, weakly similar to
PUTATIVE SERINE/THREONINE-PROTEIN KINASE PKWA (EC
2.7.1.-). ).
Length = 476
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = -2
Query: 229 EQFLDPITKKHISDPVKNTMCGHVYERETILNLIRRKHRIRCPVAGCANPESI 71
++F+ PIT++ + DPV G+ YE+E + N I +K R P+ P ++
Sbjct: 406 DEFICPITRELMKDPV-IASDGYSYEKEAMENWISKKKR-TSPMTNLVLPSAV 456
>AJ310550-1|CAC39247.1| 1101|Homo sapiens SMC5 protein protein.
Length = 1101
Score = 31.5 bits (68), Expect = 2.7
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = -2
Query: 400 ERFEDGLKTLSQNRINPNSHRYMQELKTRYESGLQSVSSSGL----TENLNESDIAIVQT 233
E ED K + R+ S + EL ++SG + S+ L + LN +V
Sbjct: 961 ENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPFRVVDE 1020
Query: 232 NEQFLDPITKKHISDPVKNTMC 167
Q +DPI ++ + + V NT C
Sbjct: 1021 INQGMDPINERRVFEMVVNTAC 1042
>AC009307-1|AAX93043.1| 219|Homo sapiens unknown protein.
Length = 219
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = -2
Query: 229 EQFLDPITKKHISDPVKNTMCGHVYERETILNLIRRKHRIRCPVAGCANPESI 71
++F+ PIT++ + DPV G+ YE+E + N I +K R P+ P ++
Sbjct: 149 DEFICPITRELMKDPV-IASDGYSYEKEAMENWISKKKR-TSPMTNLVLPSAV 199
>AB033050-1|BAA86538.2| 997|Homo sapiens KIAA1224 protein protein.
Length = 997
Score = 31.5 bits (68), Expect = 2.7
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 2/127 (1%)
Frame = -2
Query: 382 LKTLSQNRINPNSHRYMQELKTRYESGLQSVSSSGLTENLNESDIAIVQTNEQFLDPITK 203
L+ L + R+ P H + ++K + S +SSG T E + PIT
Sbjct: 621 LQGLLKKRLLPAEH-CITKIKRNFSS---VAASSGNTTLNGEDGVEQTAIKVSLKCPITF 676
Query: 202 KHISDPVKNTMCGHV--YERETILNLIRRKHRIRCPVAGCANPESIQENHLLEDEELRFR 29
+ I P + C HV ++ E+ L L + RCPV N ++ E L D+ +
Sbjct: 677 RRIQLPARGHDCKHVQCFDLESYLQLNCERGTWRCPV---CNKTALLEG-LEVDQYMWGI 732
Query: 28 LSLSQHS 8
L+ QHS
Sbjct: 733 LNAIQHS 739
>AB011166-1|BAA25520.2| 1120|Homo sapiens KIAA0594 protein protein.
Length = 1120
Score = 31.5 bits (68), Expect = 2.7
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = -2
Query: 400 ERFEDGLKTLSQNRINPNSHRYMQELKTRYESGLQSVSSSGL----TENLNESDIAIVQT 233
E ED K + R+ S + EL ++SG + S+ L + LN +V
Sbjct: 980 ENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPFRVVDE 1039
Query: 232 NEQFLDPITKKHISDPVKNTMC 167
Q +DPI ++ + + V NT C
Sbjct: 1040 INQGMDPINERRVFEMVVNTAC 1061
>U72066-1|AAC14371.1| 897|Homo sapiens CtBP interacting protein
CtIP protein.
Length = 897
Score = 29.9 bits (64), Expect = 8.2
Identities = 31/142 (21%), Positives = 59/142 (41%), Gaps = 2/142 (1%)
Frame = -2
Query: 616 DIRDLRKQCIQSLISTAENVAKYLQEDKEDNYEKLKMYMENYCXXXXXXXXXXXXXXXAK 437
+ ++R+Q ++ LI+ N LQE+ + E+L+ +EN
Sbjct: 105 EFENIRQQNLK-LITELMNERNTLQEENKKLSEQLQQKIENDQQHQAAELECEEDVIPDS 163
Query: 436 ADT--NISNINTLQERFEDGLKTLSQNRINPNSHRYMQELKTRYESGLQSVSSSGLTENL 263
T + S +N L+ + ++ + Q +H ++ E S SS+ N
Sbjct: 164 PITAFSFSGVNRLRRKENPHVRYIEQ------THTKLEHSVCANEMRKVSKSSTHPQHNP 217
Query: 262 NESDIAIVQTNEQFLDPITKKH 197
NE++I + T +Q P+ K H
Sbjct: 218 NENEILVADTYDQSQSPMAKAH 239
>BC066363-1|AAH66363.1| 1805|Homo sapiens SDK2 protein protein.
Length = 1805
Score = 29.9 bits (64), Expect = 8.2
Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Frame = -2
Query: 391 EDGLKTLSQNRINPNSHRYMQELKTRYESGLQSVSSSGLTENLNE------SDIAI-VQT 233
++GL T S R +P S Y E T+Y + L SS LTE +E SD V +
Sbjct: 1640 KNGLYTRSPPRPSPGSLHYSDEDVTKY-NDLIPAESSSLTEKPSEISDSQGSDSEYEVDS 1698
Query: 232 NEQFLDPITKKHISDP 185
N Q +ISDP
Sbjct: 1699 NHQKAHSFVNHYISDP 1714
>BC045763-1|AAH45763.1| 1329|Homo sapiens SDK2 protein protein.
Length = 1329
Score = 29.9 bits (64), Expect = 8.2
Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Frame = -2
Query: 391 EDGLKTLSQNRINPNSHRYMQELKTRYESGLQSVSSSGLTENLNE------SDIAI-VQT 233
++GL T S R +P S Y E T+Y + L SS LTE +E SD V +
Sbjct: 1164 KNGLYTRSPPRPSPGSLHYSDEDVTKY-NDLIPAESSSLTEKPSEISDSQGSDSEYEVDS 1222
Query: 232 NEQFLDPITKKHISDP 185
N Q +ISDP
Sbjct: 1223 NHQKAHSFVNHYISDP 1238
>BC030590-1|AAH30590.1| 902|Homo sapiens RBBP8 protein protein.
Length = 902
Score = 29.9 bits (64), Expect = 8.2
Identities = 31/142 (21%), Positives = 59/142 (41%), Gaps = 2/142 (1%)
Frame = -2
Query: 616 DIRDLRKQCIQSLISTAENVAKYLQEDKEDNYEKLKMYMENYCXXXXXXXXXXXXXXXAK 437
+ ++R+Q ++ LI+ N LQE+ + E+L+ +EN
Sbjct: 105 EFENIRQQNLK-LITELMNERNTLQEENKKLSEQLQQKIENDQQHQAAELECEEDVIPDS 163
Query: 436 ADT--NISNINTLQERFEDGLKTLSQNRINPNSHRYMQELKTRYESGLQSVSSSGLTENL 263
T + S +N L+ + ++ + Q +H ++ E S SS+ N
Sbjct: 164 PITAFSFSGVNRLRRKENPHVRYIEQ------THTKLEHSVCANEMRKVSKSSTHPQHNP 217
Query: 262 NESDIAIVQTNEQFLDPITKKH 197
NE++I + T +Q P+ K H
Sbjct: 218 NENEILVADTYDQSQSPMAKAH 239
>AL137357-1|CAB70709.1| 1185|Homo sapiens hypothetical protein
protein.
Length = 1185
Score = 29.9 bits (64), Expect = 8.2
Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Frame = -2
Query: 391 EDGLKTLSQNRINPNSHRYMQELKTRYESGLQSVSSSGLTENLNE------SDIAI-VQT 233
++GL T S R +P S Y E T+Y + L SS LTE +E SD V +
Sbjct: 976 KNGLYTRSPPRPSPGSLHYSDEDVTKY-NDLIPAESSSLTEKPSEISDSQGSDSEYEVDS 1034
Query: 232 NEQFLDPITKKHISDP 185
N Q +ISDP
Sbjct: 1035 NHQKAHSFVNHYISDP 1050
>AK001694-1|BAA91841.1| 574|Homo sapiens protein ( Homo sapiens
cDNA FLJ10832 fis, clone NT2RP4001150, weakly similar to
NG-CAM RELATED CELL ADHESION MOLECULE PRECURSOR. ).
Length = 574
Score = 29.9 bits (64), Expect = 8.2
Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Frame = -2
Query: 391 EDGLKTLSQNRINPNSHRYMQELKTRYESGLQSVSSSGLTENLNE------SDIAI-VQT 233
++GL T S R +P S Y E T+Y + L SS LTE +E SD V +
Sbjct: 409 KNGLYTRSPPRPSPGSLHYSDEDVTKY-NDLIPAESSSLTEKPSEISDSQGSDSEYEVDS 467
Query: 232 NEQFLDPITKKHISDP 185
N Q +ISDP
Sbjct: 468 NHQKAHSFVNHYISDP 483
>AF043431-1|AAC34368.1| 897|Homo sapiens retinoblastoma-interacting
protein protein.
Length = 897
Score = 29.9 bits (64), Expect = 8.2
Identities = 31/142 (21%), Positives = 59/142 (41%), Gaps = 2/142 (1%)
Frame = -2
Query: 616 DIRDLRKQCIQSLISTAENVAKYLQEDKEDNYEKLKMYMENYCXXXXXXXXXXXXXXXAK 437
+ ++R+Q ++ LI+ N LQE+ + E+L+ +EN
Sbjct: 105 EFENIRQQNLK-LITELMNERNTLQEENKKLSEQLQQKIENDQQHQAAELECEEDVIPDS 163
Query: 436 ADT--NISNINTLQERFEDGLKTLSQNRINPNSHRYMQELKTRYESGLQSVSSSGLTENL 263
T + S +N L+ + ++ + Q +H ++ E S SS+ N
Sbjct: 164 PITAFSFSGVNRLRRKENPHVRYIEQ------THTKLEHSVCANEMRKVSKSSTHPQHNP 217
Query: 262 NESDIAIVQTNEQFLDPITKKH 197
NE++I + T +Q P+ K H
Sbjct: 218 NENEILVADTYDQSQSPMAKAH 239
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,901,702
Number of Sequences: 237096
Number of extensions: 1690740
Number of successful extensions: 11369
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 11235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11367
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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