Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11f12
(834 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY994093-1|AAX86006.1| 45|Anopheles gambiae metallothionein 1 ... 33 0.011
AY994094-1|AAX86007.1| 41|Anopheles gambiae metallothionein 2 ... 29 0.23
AY578809-1|AAT07314.1| 358|Anopheles gambiae Sloan-Kettering In... 29 0.23
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 26 1.2
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 25 3.8
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 25 3.8
AY183375-1|AAO24765.1| 679|Anopheles gambiae NADPH cytochrome P... 24 5.0
AY341187-1|AAR13751.1| 189|Anopheles gambiae GNBP A1 protein. 24 6.6
AY341186-1|AAR13750.1| 189|Anopheles gambiae GNBP A1 protein. 24 6.6
AY341185-1|AAR13749.1| 189|Anopheles gambiae GNBP A1 protein. 24 6.6
AY341184-1|AAR13748.1| 187|Anopheles gambiae GNBP A1 protein. 24 6.6
AY341183-1|AAR13747.1| 189|Anopheles gambiae GNBP A1 protein. 24 6.6
AJ973474-1|CAJ01521.1| 191|Anopheles gambiae hypothetical prote... 24 6.6
AJ697734-1|CAG26927.1| 191|Anopheles gambiae putative chemosens... 24 6.6
>AY994093-1|AAX86006.1| 45|Anopheles gambiae metallothionein 1
protein.
Length = 45
Score = 33.1 bits (72), Expect = 0.011
Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -3
Query: 301 CKPC--DCTCPSGCIKTDPCACDYPKAGCCS 215
CK C DC C SGC PCA D K C S
Sbjct: 3 CKCCGNDCKCTSGCGSGQPCATDC-KCACAS 32
>AY994094-1|AAX86007.1| 41|Anopheles gambiae metallothionein 2
protein.
Length = 41
Score = 28.7 bits (61), Expect = 0.23
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 5/39 (12%)
Frame = -3
Query: 319 PC--AYGDCKPCDCTCPSGCIKTDPCAC---DYPKAGCC 218
PC DCK C +GC C C D K GCC
Sbjct: 2 PCKTCVADCKCTSPNCGAGCGCESRCTCPCKDGAKEGCC 40
>AY578809-1|AAT07314.1| 358|Anopheles gambiae Sloan-Kettering
Institute proto-oncogeneproduct protein.
Length = 358
Score = 28.7 bits (61), Expect = 0.23
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -2
Query: 794 HGAKVVVPTEPGVRDAVDPALPPRHVGSGSHAEHHHA 684
H +K T PG V A P H+ S HA HHA
Sbjct: 33 HPSKAGAATGPGGAIVVGRAETPDHLASQHHALSHHA 69
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 26.2 bits (55), Expect = 1.2
Identities = 26/84 (30%), Positives = 32/84 (38%), Gaps = 2/84 (2%)
Frame = +1
Query: 559 PGPKTTSDSRSDFQTVVRRSGTCEPV*TTPGVQTAW-ARSRVVAW*CSAWDPDPTCRGGR 735
P TTS + Q T P+ T P T W A + W P T
Sbjct: 133 PTTTTTSAPTTPSQWTDPTITTTTPIWTDP---TTWSAPTTTTTWSDQPPPPTTTTTTVW 189
Query: 736 AGSTASRT-PGSVGTTTFAPCPLP 804
STA+ T P S TTT++ P P
Sbjct: 190 TDSTATTTTPASTTTTTWSDLPPP 213
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 24.6 bits (51), Expect = 3.8
Identities = 26/84 (30%), Positives = 31/84 (36%), Gaps = 2/84 (2%)
Frame = +1
Query: 559 PGPKTTSDSRSDFQTVVRRSGTCEPV*TTPGVQTAW-ARSRVVAW*CSAWDPDPTCRGGR 735
P TTS + Q T PV T P T W A + W P T
Sbjct: 132 PTTTTTSAPTTPSQWTDPTITTTTPVWTDP---TTWSAPTTTTTWSDQPPPPTTTTTTVW 188
Query: 736 AGSTASRT-PGSVGTTTFAPCPLP 804
TA+ T P S TTT++ P P
Sbjct: 189 TDPTATTTTPASTTTTTWSDLPPP 212
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 24.6 bits (51), Expect = 3.8
Identities = 26/84 (30%), Positives = 31/84 (36%), Gaps = 2/84 (2%)
Frame = +1
Query: 559 PGPKTTSDSRSDFQTVVRRSGTCEPV*TTPGVQTAW-ARSRVVAW*CSAWDPDPTCRGGR 735
P TTS + Q T PV T P T W A + W P T
Sbjct: 132 PTTTTTSAPTTPSQWTDPTITTTTPVWTDP---TTWSAPTTTTTWSDQPPPPTTTTTTVW 188
Query: 736 AGSTASRT-PGSVGTTTFAPCPLP 804
TA+ T P S TTT++ P P
Sbjct: 189 TDPTATTTTPASTTTTTWSDLPPP 212
>AY183375-1|AAO24765.1| 679|Anopheles gambiae NADPH cytochrome P450
reductase protein.
Length = 679
Score = 24.2 bits (50), Expect = 5.0
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 416 LASPRGSLRRRNTYRLEGHLMYRVALHFGC 505
LA RG ++ R+ + EG + + L+FGC
Sbjct: 539 LAPFRGFIQERDHCKQEGKEIGQTTLYFGC 568
>AY341187-1|AAR13751.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 23.8 bits (49), Expect = 6.6
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -2
Query: 218 FVSVSHFFEHWQHSIRIP 165
F S F WQH +RIP
Sbjct: 168 FEQGSSFAPKWQHEVRIP 185
>AY341186-1|AAR13750.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 23.8 bits (49), Expect = 6.6
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -2
Query: 218 FVSVSHFFEHWQHSIRIP 165
F S F WQH +RIP
Sbjct: 168 FEQGSSFAPKWQHEVRIP 185
>AY341185-1|AAR13749.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 23.8 bits (49), Expect = 6.6
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -2
Query: 218 FVSVSHFFEHWQHSIRIP 165
F S F WQH +RIP
Sbjct: 168 FEQGSSFAPKWQHEVRIP 185
>AY341184-1|AAR13748.1| 187|Anopheles gambiae GNBP A1 protein.
Length = 187
Score = 23.8 bits (49), Expect = 6.6
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -2
Query: 218 FVSVSHFFEHWQHSIRIP 165
F S F WQH +RIP
Sbjct: 166 FEQGSSFAPKWQHEVRIP 183
>AY341183-1|AAR13747.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 23.8 bits (49), Expect = 6.6
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -2
Query: 218 FVSVSHFFEHWQHSIRIP 165
F S F WQH +RIP
Sbjct: 168 FEQGSSFAPKWQHEVRIP 185
>AJ973474-1|CAJ01521.1| 191|Anopheles gambiae hypothetical protein
protein.
Length = 191
Score = 23.8 bits (49), Expect = 6.6
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -3
Query: 712 QGPMQNITTQRHDYVPKPSVLRESFKPAHKYH 617
+ ++ IT +DY + LRE + P+ +YH
Sbjct: 88 ENALKIITRLYYDYPDQYRALRERWDPSGEYH 119
>AJ697734-1|CAG26927.1| 191|Anopheles gambiae putative chemosensory
protein CSP5 protein.
Length = 191
Score = 23.8 bits (49), Expect = 6.6
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -3
Query: 712 QGPMQNITTQRHDYVPKPSVLRESFKPAHKYH 617
+ ++ IT +DY + LRE + P+ +YH
Sbjct: 88 ENALKIITRLYYDYPDQYRALRERWDPSGEYH 119
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,030,896
Number of Sequences: 2352
Number of extensions: 25366
Number of successful extensions: 121
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 110
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88065063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -