Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11f11
(1105 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr 2|||M... 542 e-155
SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein Ubi2|... 153 4e-38
SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein Ubi1|Schiz... 153 4e-38
SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein Ubi3|Schi... 152 7e-38
SPAC589.10c |||ribomal-ubiquitin fusion protein Ubi5|Schizosacch... 152 7e-38
SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like pro... 92 1e-19
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 44 5e-05
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 42 1e-04
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 41 4e-04
SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter Trk2|Sch... 28 2.7
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 27 4.7
SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 27 6.2
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 27 6.2
SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces po... 26 8.1
>SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 382
Score = 542 bits (1338), Expect = e-155
Identities = 264/279 (94%), Positives = 276/279 (98%)
Frame = -2
Query: 837 RXRSKTKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 658
+ + + KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 27 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 86
Query: 657 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 478
KTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 87 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Query: 477 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 298
LRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct: 147 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 206
Query: 297 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 118
TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPP
Sbjct: 207 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPP 266
Query: 117 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 1
DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 305
Score = 541 bits (1335), Expect = e-155
Identities = 263/279 (94%), Positives = 276/279 (98%)
Frame = -2
Query: 837 RXRSKTKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 658
+ + + KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 103 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 162
Query: 657 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 478
KTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 163 KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Query: 477 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 298
LRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGR
Sbjct: 223 LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 282
Query: 297 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 118
TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPP
Sbjct: 283 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPP 342
Query: 117 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 1
DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 381
Score = 451 bits (1112), Expect = e-128
Identities = 220/229 (96%), Positives = 229/229 (100%)
Frame = -2
Query: 687 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 508
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 507 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 328
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120
Query: 327 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 148
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180
Query: 147 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 1
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229
Score = 56.0 bits (129), Expect = 9e-09
Identities = 35/83 (42%), Positives = 41/83 (49%)
Frame = -1
Query: 1069 KGXVPXXRGXSSXQXGFXFXWQAXGXGXXLSXXNXQKRFPXSXLYWVFGEGMQXXVKXLT 890
K + G Q F + G LS N QK + + G GMQ VK LT
Sbjct: 27 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG-GMQIFVKTLT 85
Query: 889 GKXITXEVEASDTIENXKXKIQD 821
GK IT EVE+SDTI+N K KIQD
Sbjct: 86 GKTITLEVESSDTIDNVKSKIQD 108
Score = 56.0 bits (129), Expect = 9e-09
Identities = 35/83 (42%), Positives = 41/83 (49%)
Frame = -1
Query: 1069 KGXVPXXRGXSSXQXGFXFXWQAXGXGXXLSXXNXQKRFPXSXLYWVFGEGMQXXVKXLT 890
K + G Q F + G LS N QK + + G GMQ VK LT
Sbjct: 103 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG-GMQIFVKTLT 161
Query: 889 GKXITXEVEASDTIENXKXKIQD 821
GK IT EVE+SDTI+N K KIQD
Sbjct: 162 GKTITLEVESSDTIDNVKSKIQD 184
Score = 56.0 bits (129), Expect = 9e-09
Identities = 35/83 (42%), Positives = 41/83 (49%)
Frame = -1
Query: 1069 KGXVPXXRGXSSXQXGFXFXWQAXGXGXXLSXXNXQKRFPXSXLYWVFGEGMQXXVKXLT 890
K + G Q F + G LS N QK + + G GMQ VK LT
Sbjct: 179 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG-GMQIFVKTLT 237
Query: 889 GKXITXEVEASDTIENXKXKIQD 821
GK IT EVE+SDTI+N K KIQD
Sbjct: 238 GKTITLEVESSDTIDNVKSKIQD 260
Score = 56.0 bits (129), Expect = 9e-09
Identities = 35/83 (42%), Positives = 41/83 (49%)
Frame = -1
Query: 1069 KGXVPXXRGXSSXQXGFXFXWQAXGXGXXLSXXNXQKRFPXSXLYWVFGEGMQXXVKXLT 890
K + G Q F + G LS N QK + + G GMQ VK LT
Sbjct: 255 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG-GMQIFVKTLT 313
Query: 889 GKXITXEVEASDTIENXKXKIQD 821
GK IT EVE+SDTI+N K KIQD
Sbjct: 314 GKTITLEVESSDTIDNVKSKIQD 336
Score = 47.6 bits (108), Expect = 3e-06
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = -1
Query: 916 MQXXVKXLTGKXITXEVEASDTIENXKXKIQD 821
MQ VK LTGK IT EVE+SDTI+N K KIQD
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD 32
>SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein
Ubi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 153 bits (371), Expect = 4e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = -2
Query: 687 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 508
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 507 IQKESTLHLVLRLRGG-MQIFVKTLTGK 427
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 153 bits (371), Expect = 4e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = -2
Query: 459 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 280
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 279 IQKESTLHLVLRLRGG-MQIFVKTLTGK 199
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 153 bits (370), Expect = 6e-38
Identities = 73/77 (94%), Positives = 77/77 (100%)
Frame = -2
Query: 231 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 52
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 51 IQKESTLHLVLRLRGGM 1
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 95.9 bits (228), Expect = 9e-21
Identities = 47/62 (75%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Frame = -2
Query: 837 RXRSKTKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG-MQIFVKTLT 661
+ + + KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG ++ +K L
Sbjct: 27 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALA 86
Query: 660 GK 655
K
Sbjct: 87 SK 88
Score = 47.6 bits (108), Expect = 3e-06
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = -1
Query: 916 MQXXVKXLTGKXITXEVEASDTIENXKXKIQD 821
MQ VK LTGK IT EVE+SDTI+N K KIQD
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD 32
>SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein
Ubi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 153 bits (371), Expect = 4e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = -2
Query: 687 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 508
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 507 IQKESTLHLVLRLRGG-MQIFVKTLTGK 427
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 153 bits (371), Expect = 4e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = -2
Query: 459 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 280
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 279 IQKESTLHLVLRLRGG-MQIFVKTLTGK 199
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 153 bits (370), Expect = 6e-38
Identities = 73/77 (94%), Positives = 77/77 (100%)
Frame = -2
Query: 231 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 52
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 51 IQKESTLHLVLRLRGGM 1
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 95.9 bits (228), Expect = 9e-21
Identities = 47/62 (75%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Frame = -2
Query: 837 RXRSKTKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG-MQIFVKTLT 661
+ + + KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG ++ +K L
Sbjct: 27 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALA 86
Query: 660 GK 655
K
Sbjct: 87 SK 88
Score = 47.6 bits (108), Expect = 3e-06
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = -1
Query: 916 MQXXVKXLTGKXITXEVEASDTIENXKXKIQD 821
MQ VK LTGK IT EVE+SDTI+N K KIQD
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD 32
>SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein
Ubi3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 152 bits (369), Expect = 7e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = -2
Query: 687 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 508
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 507 IQKESTLHLVLRLRGG 460
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 7e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = -2
Query: 459 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 280
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 279 IQKESTLHLVLRLRGG 232
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 7e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = -2
Query: 231 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 52
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 51 IQKESTLHLVLRLRGG 4
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 95.1 bits (226), Expect = 2e-20
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = -2
Query: 837 RXRSKTKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 688
+ + + KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 27 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 47.6 bits (108), Expect = 3e-06
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = -1
Query: 916 MQXXVKXLTGKXITXEVEASDTIENXKXKIQD 821
MQ VK LTGK IT EVE+SDTI+N K KIQD
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD 32
>SPAC589.10c |||ribomal-ubiquitin fusion protein
Ubi5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 152 bits (369), Expect = 7e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = -2
Query: 687 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 508
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 507 IQKESTLHLVLRLRGG 460
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 7e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = -2
Query: 459 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 280
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 279 IQKESTLHLVLRLRGG 232
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 7e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = -2
Query: 231 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 52
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 51 IQKESTLHLVLRLRGG 4
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 95.1 bits (226), Expect = 2e-20
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = -2
Query: 837 RXRSKTKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 688
+ + + KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 27 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 47.6 bits (108), Expect = 3e-06
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = -1
Query: 916 MQXXVKXLTGKXITXEVEASDTIENXKXKIQD 821
MQ VK LTGK IT EVE+SDTI+N K KIQD
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD 32
>SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like
protein modifier Ned8|Schizosaccharomyces pombe|chr
2|||Manual
Length = 78
Score = 91.9 bits (218), Expect = 1e-19
Identities = 40/76 (52%), Positives = 56/76 (73%)
Frame = -2
Query: 687 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 508
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYH 60
Query: 507 IQKESTLHLVLRLRGG 460
++ S LHLVL LRGG
Sbjct: 61 LEGGSVLHLVLALRGG 76
Score = 91.9 bits (218), Expect = 1e-19
Identities = 40/76 (52%), Positives = 56/76 (73%)
Frame = -2
Query: 459 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 280
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYH 60
Query: 279 IQKESTLHLVLRLRGG 232
++ S LHLVL LRGG
Sbjct: 61 LEGGSVLHLVLALRGG 76
Score = 91.9 bits (218), Expect = 1e-19
Identities = 40/76 (52%), Positives = 56/76 (73%)
Frame = -2
Query: 231 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 52
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYH 60
Query: 51 IQKESTLHLVLRLRGG 4
++ S LHLVL LRGG
Sbjct: 61 LEGGSVLHLVLALRGG 76
Score = 63.3 bits (147), Expect = 6e-11
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = -2
Query: 837 RXRSKTKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 688
+ R + KEGIPP QQRLI+AGKQ+ D + Y+++ S LHLVL LRGG
Sbjct: 27 KERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLALRGG 76
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 43.6 bits (98), Expect = 5e-05
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = -2
Query: 657 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 496
K + +V A I +K KIQ ++ ++Q+LI++G+ L D +T+ +YNI+++
Sbjct: 12 KFVISDVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEYNIKEQ 65
Score = 43.6 bits (98), Expect = 5e-05
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = -2
Query: 429 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 268
K + +V A I +K KIQ ++ ++Q+LI++G+ L D +T+ +YNI+++
Sbjct: 12 KFVISDVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEYNIKEQ 65
Score = 43.6 bits (98), Expect = 5e-05
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = -2
Query: 201 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 40
K + +V A I +K KIQ ++ ++Q+LI++G+ L D +T+ +YNI+++
Sbjct: 12 KFVISDVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEYNIKEQ 65
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 42.3 bits (95), Expect = 1e-04
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = -2
Query: 687 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 508
+ + +K + + V++ ++ +K I I ++QRLI+AG+ L+D +L Y
Sbjct: 4 ISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYK 63
Query: 507 IQKESTLHLVLRL 469
IQ ++HLV L
Sbjct: 64 IQDGHSIHLVKTL 76
Score = 42.3 bits (95), Expect = 1e-04
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = -2
Query: 459 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 280
+ + +K + + V++ ++ +K I I ++QRLI+AG+ L+D +L Y
Sbjct: 4 ISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYK 63
Query: 279 IQKESTLHLVLRL 241
IQ ++HLV L
Sbjct: 64 IQDGHSIHLVKTL 76
Score = 42.3 bits (95), Expect = 1e-04
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = -2
Query: 231 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 52
+ + +K + + V++ ++ +K I I ++QRLI+AG+ L+D +L Y
Sbjct: 4 ISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYK 63
Query: 51 IQKESTLHLVLRL 13
IQ ++HLV L
Sbjct: 64 IQDGHSIHLVKTL 76
Score = 36.7 bits (81), Expect = 0.006
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = -2
Query: 810 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 697
I ++QRLI+AG+ L+D +L Y IQ ++HLV L
Sbjct: 39 IEKERQRLIYAGRVLKDEESLKTYKIQDGHSIHLVKTL 76
>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 40.7 bits (91), Expect = 4e-04
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = -2
Query: 660 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 487
GK LE+E ++T +K ++ +PP++Q++I G QL+D L I+ +TL
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATL 67
Score = 40.7 bits (91), Expect = 4e-04
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = -2
Query: 432 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 259
GK LE+E ++T +K ++ +PP++Q++I G QL+D L I+ +TL
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATL 67
Score = 40.7 bits (91), Expect = 4e-04
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = -2
Query: 204 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 31
GK LE+E ++T +K ++ +PP++Q++I G QL+D L I+ +TL
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATL 67
>SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter
Trk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 880
Score = 27.9 bits (59), Expect = 2.7
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = -1
Query: 310 GRRTHLVRLQHSKRIHTPSCTASSWRHADLRENSDR*DHHFGSRSFGH 167
G R V L ++H P + A+ +EN HHF R F +
Sbjct: 143 GNRKIRVLLDQGNQMHRPVAPETKAEEAEHQENEKHHRHHFRLRKFAN 190
Score = 26.6 bits (56), Expect = 6.2
Identities = 14/52 (26%), Positives = 21/52 (40%)
Frame = -1
Query: 766 GRRTHLVRLQHSKRIHTPSCTASSWRHADLRENSDRKDHHFGSRSIRHN*ER 611
G R V L ++H P + A+ +EN HHF R + +R
Sbjct: 143 GNRKIRVLLDQGNQMHRPVAPETKAEEAEHQENEKHHRHHFRLRKFANAIDR 194
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 27.1 bits (57), Expect = 4.7
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = -2
Query: 684 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD--Y 511
+I V T+ K +V + T+ +K I P D+ +LI AG+ L + L + +
Sbjct: 5 RIRVTTVDQKVGIFQVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLEEILH 64
Query: 510 NIQKESTLHLVLRLRGGMQIFVKTLTGKTI 421
+ T HLV+ + + + T ++
Sbjct: 65 DATDLVTFHLVIAVFNSTSTTLPSATSSSV 94
Score = 27.1 bits (57), Expect = 4.7
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = -2
Query: 456 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD--Y 283
+I V T+ K +V + T+ +K I P D+ +LI AG+ L + L + +
Sbjct: 5 RIRVTTVDQKVGIFQVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLEEILH 64
Query: 282 NIQKESTLHLVLRLRGGMQIFVKTLTGKTI 193
+ T HLV+ + + + T ++
Sbjct: 65 DATDLVTFHLVIAVFNSTSTTLPSATSSSV 94
Score = 26.2 bits (55), Expect = 8.1
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = -2
Query: 228 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD--Y 55
+I V T+ K +V + T+ +K I P D+ +LI AG+ L + L + +
Sbjct: 5 RIRVTTVDQKVGIFQVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLEEILH 64
Query: 54 NIQKESTLHLVL 19
+ T HLV+
Sbjct: 65 DATDLVTFHLVI 76
>SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 334
Score = 26.6 bits (56), Expect = 6.2
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 235 STKTQYKMECGFFLNV 282
S +TQYKMEC +NV
Sbjct: 298 SLETQYKMECAVLMNV 313
Score = 26.6 bits (56), Expect = 6.2
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 463 STKTQYKMECGFFLNV 510
S +TQYKMEC +NV
Sbjct: 298 SLETQYKMECAVLMNV 313
Score = 26.6 bits (56), Expect = 6.2
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 691 STKTQYKMECGFFLNV 738
S +TQYKMEC +NV
Sbjct: 298 SLETQYKMECAVLMNV 313
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 26.6 bits (56), Expect = 6.2
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -1
Query: 526 HLVRLQHSKRIHTPSCIASSWRHADLRKNSDR*D-HHFGSRSFGHNRECEGEDPRQRRNS 350
H + + HS + SS+ H +KNS R H + S G+N + E +Q S
Sbjct: 108 HAITIHHSTG---NGLLRSSFDHDYRQKNSPRNSIHRLSNISIGNN-PIDFESSQQNNPS 163
Query: 349 S*STASH 329
S +T+SH
Sbjct: 164 SLNTSSH 170
>SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 549
Score = 26.2 bits (55), Expect = 8.1
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = -1
Query: 283 QHSKRIHTPSCTASSWRHADLRENSDR*DHHFGSRSFGHNRECEGEDPRQRRNSS*STAS 104
+H K S ++ +E+ D+ + SRS H+R + P R +S S
Sbjct: 286 KHYKNEWAESINLDNFNRPSQQEDYDKPKNTQVSRSSNHHRRYDSYHPDSRSDSYRSKRE 345
Query: 103 HLCWQAAGRRT-HLVRLQY 50
H + G R+ HL + Y
Sbjct: 346 HYDNRDTGPRSKHLEKSSY 364
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,417,682
Number of Sequences: 5004
Number of extensions: 92900
Number of successful extensions: 318
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 312
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 583709326
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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