Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte11f07
         (755 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domai...    27   0.47 
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    26   1.1  
AF269155-1|AAF91400.1|   59|Anopheles gambiae transcription fact...    24   5.8  

>DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 194

 Score = 27.5 bits (58), Expect = 0.47
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = -1

Query: 692 NMPSRSTFKSLLIETALFIGLFVLAGHLSINFWERYVIQSELSLMKCSLHSLKDTIN 522
           N+ S S FKSLL+   L I + +  G    +  ER++    +  + C     +DT N
Sbjct: 111 NIKSCSFFKSLLMVLVLLINVVIADGDTCNDANERFLECGPVYQLACDSRYERDTYN 167


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +1

Query: 256 VGFSALRVIVVAFLIGFLLSFSSCTE*WLCFLFLASIITCICNSCS 393
           +G  A R ++   LI  LL +   +    CF+++  I   I N C+
Sbjct: 241 LGVQATRNVIRCELIALLLHYLHLSTSIWCFIYIYVIYDLIANECT 286


>AF269155-1|AAF91400.1|   59|Anopheles gambiae transcription factor
           Deformed protein.
          Length = 59

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 11/42 (26%), Positives = 23/42 (54%)
 Frame = -1

Query: 470 KTEYIGTKLDKLEKKHNQKQFLDRRRLHELQMQVIIDAKNKK 345
           +T Y   ++ +LEK+ +   +L RRR  E+   +++  +  K
Sbjct: 5   RTAYTRHQILELEKEFHYNXYLTRRRRIEIAHTLVLSERQIK 46


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 730,219
Number of Sequences: 2352
Number of extensions: 14609
Number of successful extensions: 33
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)