Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte11f02
         (842 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    28   0.41 
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            25   3.8  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    25   3.8  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    24   6.7  
DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        23   8.8  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    23   8.8  

>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 27.9 bits (59), Expect = 0.41
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +2

Query: 323 NMAPAKSPRDGNSNGTMYKRCTVEKHIPQTRK 418
           N +  K   D NS GTM  RC    HI + R+
Sbjct: 272 NRSREKETSDSNSTGTMRLRCNDLTHIERARQ 303


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = -2

Query: 232 DTSCAPLRIGSPMRSSYWNKNGGKTKSNR 146
           DT   P   G    +  W K GGK   +R
Sbjct: 231 DTKALPAAGGKEEETRQWRKEGGKQSKSR 259


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 11/44 (25%), Positives = 20/44 (45%)
 Frame = -2

Query: 229 TSCAPLRIGSPMRSSYWNKNGGKTKSNRKRNKETGLTDCDDIKT 98
           T+  P+    P+R    N    + + NR  N  T +TD   +++
Sbjct: 186 TTVQPMHASQPLRGETGNWVQHRAQRNRTNNNNTIITDSGHMRS 229


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = -1

Query: 227 KLRAIAYRLSNEIVVLEQK 171
           K +++ Y LSNEIVVLE+K
Sbjct: 278 KEKSLEY-LSNEIVVLEEK 295


>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 15/64 (23%), Positives = 28/64 (43%)
 Frame = -1

Query: 779 FRPLQLILIFLLVWYYCTLTIRESILKVNGSRIKGWWRLHHFISTVVAGILLIWPQNQPW 600
           F PL +I +  L++     +  E   KV       W R+H     V+A ++   P +   
Sbjct: 113 FSPLSIITVANLLFLGSGGSTHEEFGKVLTPSSMNWKRMHQRYGNVLANLMSPEPIDSRR 172

Query: 599 EEFR 588
           +++R
Sbjct: 173 DQWR 176


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 17/45 (37%), Positives = 28/45 (62%)
 Frame = +1

Query: 682 ILEPFTLSILSRIVSVQ*YQTRRKIKINCSGLKSIYRFPTAKINA 816
           ++  F+L ++S+IVS++ Y  +RKI+ N S   S    P A+ NA
Sbjct: 115 VIVSFSL-VISQIVSIRWYLNKRKIR-NASA--STTGPPDAEANA 155


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 994,618
Number of Sequences: 2352
Number of extensions: 23129
Number of successful extensions: 83
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 83
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89305416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)