Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte11f02
         (842 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL133506-1|CAB65846.1|  387|Drosophila melanogaster EG:BACN33B1....   295   4e-80
AE014298-465|AAS65258.1|  387|Drosophila melanogaster CG32795-PC...   295   4e-80
AE014298-464|AAF45824.2|  387|Drosophila melanogaster CG32795-PB...   295   4e-80
AE014298-463|AAF45825.2|  387|Drosophila melanogaster CG32795-PA...   295   4e-80
AY118486-1|AAM49855.1|  174|Drosophila melanogaster HL08104p pro...   160   2e-39

>AL133506-1|CAB65846.1|  387|Drosophila melanogaster EG:BACN33B1.2
           protein.
          Length = 387

 Score =  295 bits (725), Expect = 4e-80
 Identities = 136/211 (64%), Positives = 163/211 (77%), Gaps = 1/211 (0%)
 Frame = -1

Query: 842 KFKLILSAIAFILAVGNLYIDFRPLQLILIFLLVWYYCTLTIRESILKVNGSRIKGWWRL 663
           KFKLIL+ I  I+A  NL  ++R L+L  IFLLVWYYCTLTIRESILKVNGSRIKGWWR 
Sbjct: 129 KFKLILNVIGLIMAFFNLIFNYRALELAFIFLLVWYYCTLTIRESILKVNGSRIKGWWRA 188

Query: 662 HHFISTVVAGILLIWPQNQPWEEFRHTFMWFIAYISVVQYMQFRYQSGVLYRLKALGARH 483
           HHFISTV AG+LL+WPQ + W+ FR  FM+F  YIS+VQY+QF YQ G+LYRLKALG RH
Sbjct: 189 HHFISTVAAGVLLVWPQGEHWQIFRMQFMYFNVYISIVQYLQFGYQKGLLYRLKALGERH 248

Query: 482 NMDITIEGFHSWMWRGLSYLLPFLFGGYVFQLYIAYTLYHLSYH-PEATWQVPYLAALFL 306
           NMDITIEGFHSWMWRGLS+LLPFLF GY +Q Y A+TLY L+Y  P+A W V  ++ LFL
Sbjct: 249 NMDITIEGFHSWMWRGLSFLLPFLFIGYGYQAYNAWTLYKLAYSPPDAPWHVSVMSGLFL 308

Query: 305 TLHCCNMYTILRTLRRKVKGGLKLRYKLRAI 213
            L   NM T L  +  K++   K RY+L+++
Sbjct: 309 LLFVGNMATTLWVVPEKIRERAKERYRLQSM 339


>AE014298-465|AAS65258.1|  387|Drosophila melanogaster CG32795-PC,
           isoform C protein.
          Length = 387

 Score =  295 bits (725), Expect = 4e-80
 Identities = 136/211 (64%), Positives = 163/211 (77%), Gaps = 1/211 (0%)
 Frame = -1

Query: 842 KFKLILSAIAFILAVGNLYIDFRPLQLILIFLLVWYYCTLTIRESILKVNGSRIKGWWRL 663
           KFKLIL+ I  I+A  NL  ++R L+L  IFLLVWYYCTLTIRESILKVNGSRIKGWWR 
Sbjct: 129 KFKLILNVIGLIMAFFNLIFNYRALELAFIFLLVWYYCTLTIRESILKVNGSRIKGWWRA 188

Query: 662 HHFISTVVAGILLIWPQNQPWEEFRHTFMWFIAYISVVQYMQFRYQSGVLYRLKALGARH 483
           HHFISTV AG+LL+WPQ + W+ FR  FM+F  YIS+VQY+QF YQ G+LYRLKALG RH
Sbjct: 189 HHFISTVAAGVLLVWPQGEHWQIFRMQFMYFNVYISIVQYLQFGYQKGLLYRLKALGERH 248

Query: 482 NMDITIEGFHSWMWRGLSYLLPFLFGGYVFQLYIAYTLYHLSYH-PEATWQVPYLAALFL 306
           NMDITIEGFHSWMWRGLS+LLPFLF GY +Q Y A+TLY L+Y  P+A W V  ++ LFL
Sbjct: 249 NMDITIEGFHSWMWRGLSFLLPFLFIGYGYQAYNAWTLYKLAYSPPDAPWHVSVMSGLFL 308

Query: 305 TLHCCNMYTILRTLRRKVKGGLKLRYKLRAI 213
            L   NM T L  +  K++   K RY+L+++
Sbjct: 309 LLFVGNMATTLWVVPEKIRERAKERYRLQSM 339


>AE014298-464|AAF45824.2|  387|Drosophila melanogaster CG32795-PB,
           isoform B protein.
          Length = 387

 Score =  295 bits (725), Expect = 4e-80
 Identities = 136/211 (64%), Positives = 163/211 (77%), Gaps = 1/211 (0%)
 Frame = -1

Query: 842 KFKLILSAIAFILAVGNLYIDFRPLQLILIFLLVWYYCTLTIRESILKVNGSRIKGWWRL 663
           KFKLIL+ I  I+A  NL  ++R L+L  IFLLVWYYCTLTIRESILKVNGSRIKGWWR 
Sbjct: 129 KFKLILNVIGLIMAFFNLIFNYRALELAFIFLLVWYYCTLTIRESILKVNGSRIKGWWRA 188

Query: 662 HHFISTVVAGILLIWPQNQPWEEFRHTFMWFIAYISVVQYMQFRYQSGVLYRLKALGARH 483
           HHFISTV AG+LL+WPQ + W+ FR  FM+F  YIS+VQY+QF YQ G+LYRLKALG RH
Sbjct: 189 HHFISTVAAGVLLVWPQGEHWQIFRMQFMYFNVYISIVQYLQFGYQKGLLYRLKALGERH 248

Query: 482 NMDITIEGFHSWMWRGLSYLLPFLFGGYVFQLYIAYTLYHLSYH-PEATWQVPYLAALFL 306
           NMDITIEGFHSWMWRGLS+LLPFLF GY +Q Y A+TLY L+Y  P+A W V  ++ LFL
Sbjct: 249 NMDITIEGFHSWMWRGLSFLLPFLFIGYGYQAYNAWTLYKLAYSPPDAPWHVSVMSGLFL 308

Query: 305 TLHCCNMYTILRTLRRKVKGGLKLRYKLRAI 213
            L   NM T L  +  K++   K RY+L+++
Sbjct: 309 LLFVGNMATTLWVVPEKIRERAKERYRLQSM 339


>AE014298-463|AAF45825.2|  387|Drosophila melanogaster CG32795-PA,
           isoform A protein.
          Length = 387

 Score =  295 bits (725), Expect = 4e-80
 Identities = 136/211 (64%), Positives = 163/211 (77%), Gaps = 1/211 (0%)
 Frame = -1

Query: 842 KFKLILSAIAFILAVGNLYIDFRPLQLILIFLLVWYYCTLTIRESILKVNGSRIKGWWRL 663
           KFKLIL+ I  I+A  NL  ++R L+L  IFLLVWYYCTLTIRESILKVNGSRIKGWWR 
Sbjct: 129 KFKLILNVIGLIMAFFNLIFNYRALELAFIFLLVWYYCTLTIRESILKVNGSRIKGWWRA 188

Query: 662 HHFISTVVAGILLIWPQNQPWEEFRHTFMWFIAYISVVQYMQFRYQSGVLYRLKALGARH 483
           HHFISTV AG+LL+WPQ + W+ FR  FM+F  YIS+VQY+QF YQ G+LYRLKALG RH
Sbjct: 189 HHFISTVAAGVLLVWPQGEHWQIFRMQFMYFNVYISIVQYLQFGYQKGLLYRLKALGERH 248

Query: 482 NMDITIEGFHSWMWRGLSYLLPFLFGGYVFQLYIAYTLYHLSYH-PEATWQVPYLAALFL 306
           NMDITIEGFHSWMWRGLS+LLPFLF GY +Q Y A+TLY L+Y  P+A W V  ++ LFL
Sbjct: 249 NMDITIEGFHSWMWRGLSFLLPFLFIGYGYQAYNAWTLYKLAYSPPDAPWHVSVMSGLFL 308

Query: 305 TLHCCNMYTILRTLRRKVKGGLKLRYKLRAI 213
            L   NM T L  +  K++   K RY+L+++
Sbjct: 309 LLFVGNMATTLWVVPEKIRERAKERYRLQSM 339


>AY118486-1|AAM49855.1|  174|Drosophila melanogaster HL08104p
           protein.
          Length = 174

 Score =  160 bits (389), Expect = 2e-39
 Identities = 75/124 (60%), Positives = 93/124 (75%), Gaps = 1/124 (0%)
 Frame = -1

Query: 581 FMWFIAYISVVQYMQFRYQSGVLYRLKALGARHNMDITIEGFHSWMWRGLSYLLPFLFGG 402
           FM+F  YIS+VQY+QF YQ G+LYRLKALG RHNMDITIEGFHSWMWRGLS+LLPFLF G
Sbjct: 3   FMYFNVYISIVQYLQFGYQKGLLYRLKALGERHNMDITIEGFHSWMWRGLSFLLPFLFIG 62

Query: 401 YVFQLYIAYTLYHLSYH-PEATWQVPYLAALFLTLHCCNMYTILRTLRRKVKGGLKLRYK 225
           Y +Q Y A+TLY L+Y  P+A W V  ++ LFL L   NM T L  +  K++   K RY+
Sbjct: 63  YGYQAYNAWTLYKLAYSPPDAPWHVSVMSGLFLLLFVGNMATTLWVVPEKIRERAKERYR 122

Query: 224 LRAI 213
           L+++
Sbjct: 123 LQSM 126


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,470,869
Number of Sequences: 53049
Number of extensions: 966255
Number of successful extensions: 2163
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2158
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)