Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte11e22
         (782 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       25   2.0  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   2.6  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   8.1  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    23   8.1  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    23   8.1  

>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 22/61 (36%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
 Frame = -3

Query: 366 TTIPCSVL--LNTAAENNVTEAPIVENEKVEIDTINSTTSPFSDDPNQAVALKLTTEGNY 193
           TT+P SV    +T A    T  P   N         +T  P SD PN       TTEGN 
Sbjct: 407 TTMPPSVAPTTSTVAPGTTTTTPTGANP-------GTTQPPTSDAPNHTTT-STTTEGNP 458

Query: 192 G 190
           G
Sbjct: 459 G 459


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -2

Query: 445  YKFEQQWTRRYEMYRNCYNKDSKGVYDDYPMF 350
            YK+ +Q+   ++ Y + YNK+ K   D Y  F
Sbjct: 971  YKYYKQYPHLFKDYFSQYNKNHKYQNDYYEQF 1002


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 451  QKYKFEQQWTRRYEMYRNCY 392
            Q+YK   + T ++ M  NCY
Sbjct: 3105 QRYKSHYKRTSKHSMIENCY 3124


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = +1

Query: 703 PGSCNPNTCKRTSCATNPTKPST 771
           PGS N N C  T        PST
Sbjct: 175 PGSWNTNQCSLTGSTGGQAAPST 197


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = +1

Query: 703 PGSCNPNTCKRTSCATNPTKPST 771
           PGS N N C  T        PST
Sbjct: 175 PGSWNTNQCSLTGSTGGQAAPST 197


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 783,202
Number of Sequences: 2352
Number of extensions: 16008
Number of successful extensions: 32
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81913191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)