Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte11e18
         (356 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450 pr...    24   2.0  
AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.         23   4.5  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    22   6.0  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         22   7.9  

>AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450
           protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -2

Query: 175 LREKVESALAPETVKKNFGTMVDSFNEFYKNL 80
           LR+K+        +K+ FGTM+    E +++L
Sbjct: 133 LRQKLTPTFTSGRMKQMFGTMLQVATELHRHL 164


>AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.
          Length = 190

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -1

Query: 77  ARGSTESLRSNFLVSKYHNPKYI 9
           A G+T     N+L + +HNP+Y+
Sbjct: 96  AVGTTAGGCRNYLDTFWHNPQYV 118


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +2

Query: 290 NQQLVHFGYLRTSSRIGYRIT 352
           NQQ  +FGYL  S  I  RIT
Sbjct: 690 NQQC-NFGYLLKSEEISTRIT 709


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -2

Query: 241 DAPKEDNSLNTLAESAKKTIE 179
           + PK+DN+  T+ +  ++ IE
Sbjct: 692 EGPKDDNTRETIDDQDRRMIE 712


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 348,163
Number of Sequences: 2352
Number of extensions: 6596
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26224815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)