Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11e15
(854 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U77352-1|AAB57735.1| 1588|Homo sapiens MAP kinase-activating dea... 33 1.7
U44953-1|AAD12154.1| 1587|Homo sapiens DENN protein. 33 1.7
BC040484-1|AAH40484.1| 1544|Homo sapiens MADD protein protein. 33 1.7
AF440434-1|AAL35261.1| 1479|Homo sapiens insulinoma-glucagonoma ... 33 1.7
AF440103-1|AAL40268.1| 1545|Homo sapiens insulinoma-glucagonoma ... 33 1.7
AF440102-1|AAL40267.1| 1565|Homo sapiens insulinoma-glucagonoma ... 33 1.7
AF440101-1|AAL40266.1| 1608|Homo sapiens insulinoma-glucagonoma ... 33 1.7
AF440100-1|AAL40265.1| 1647|Homo sapiens insulinoma-glucagonoma ... 33 1.7
AB002356-1|BAA20814.2| 1584|Homo sapiens KIAA0358 protein. 33 1.7
BC102028-1|AAI02029.1| 280|Homo sapiens FBXO16 protein protein. 32 3.1
BC102027-1|AAI02028.1| 280|Homo sapiens FBXO16 protein protein. 32 3.1
BC102026-1|AAI02027.1| 292|Homo sapiens F-box protein 16 protein. 32 3.1
BC074986-1|AAH74986.1| 292|Homo sapiens F-box protein 16 protein. 32 3.1
AF453435-1|AAN76812.1| 292|Homo sapiens F-box protein 16 protein. 32 3.1
U47924-15|AAB51321.1| 1190|Homo sapiens DRPLA protein. 30 9.3
U23851-1|AAB50276.1| 1184|Homo sapiens atrophin-1 protein. 30 9.3
D38529-1|BAA07534.1| 1182|Homo sapiens DRPLA protein protein. 30 9.3
D31840-1|BAA06626.1| 1185|Homo sapiens DRPLA protein. 30 9.3
BC051795-1|AAH51795.1| 1191|Homo sapiens atrophin 1 protein. 30 9.3
AC007679-1|AAX93069.1| 922|Homo sapiens unknown protein. 30 9.3
>U77352-1|AAB57735.1| 1588|Homo sapiens MAP kinase-activating death
domain protein protein.
Length = 1588
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/45 (44%), Positives = 21/45 (46%)
Frame = -2
Query: 577 QLVNVLPTPPSHSSDSETTQQSFSTFKPPSYSPTSYDSNIDKVSE 443
QL L PP SDSE T S S S +SY S D VSE
Sbjct: 600 QLAEALSVPPERDSDSEPTDDSGSDSMDYDDSSSSYSSLGDFVSE 644
>U44953-1|AAD12154.1| 1587|Homo sapiens DENN protein.
Length = 1587
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/45 (44%), Positives = 21/45 (46%)
Frame = -2
Query: 577 QLVNVLPTPPSHSSDSETTQQSFSTFKPPSYSPTSYDSNIDKVSE 443
QL L PP SDSE T S S S +SY S D VSE
Sbjct: 600 QLAEALSVPPERDSDSEPTDDSGSDSMDYDDSSSSYSSLGDFVSE 644
>BC040484-1|AAH40484.1| 1544|Homo sapiens MADD protein protein.
Length = 1544
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/45 (44%), Positives = 21/45 (46%)
Frame = -2
Query: 577 QLVNVLPTPPSHSSDSETTQQSFSTFKPPSYSPTSYDSNIDKVSE 443
QL L PP SDSE T S S S +SY S D VSE
Sbjct: 600 QLAEALSVPPERDSDSEPTDDSGSDSMDYDDSSSSYSSLGDFVSE 644
>AF440434-1|AAL35261.1| 1479|Homo sapiens insulinoma-glucagonoma
protein 20 splice variant 4 protein.
Length = 1479
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/45 (44%), Positives = 21/45 (46%)
Frame = -2
Query: 577 QLVNVLPTPPSHSSDSETTQQSFSTFKPPSYSPTSYDSNIDKVSE 443
QL L PP SDSE T S S S +SY S D VSE
Sbjct: 600 QLAEALSVPPERDSDSEPTDDSGSDSMDYDDSSSSYSSLGDFVSE 644
>AF440103-1|AAL40268.1| 1545|Homo sapiens insulinoma-glucagonoma
protein 20 splice variant 3 protein.
Length = 1545
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/45 (44%), Positives = 21/45 (46%)
Frame = -2
Query: 577 QLVNVLPTPPSHSSDSETTQQSFSTFKPPSYSPTSYDSNIDKVSE 443
QL L PP SDSE T S S S +SY S D VSE
Sbjct: 600 QLAEALSVPPERDSDSEPTDDSGSDSMDYDDSSSSYSSLGDFVSE 644
>AF440102-1|AAL40267.1| 1565|Homo sapiens insulinoma-glucagonoma
protein 20 splice variant 2 protein.
Length = 1565
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/45 (44%), Positives = 21/45 (46%)
Frame = -2
Query: 577 QLVNVLPTPPSHSSDSETTQQSFSTFKPPSYSPTSYDSNIDKVSE 443
QL L PP SDSE T S S S +SY S D VSE
Sbjct: 600 QLAEALSVPPERDSDSEPTDDSGSDSMDYDDSSSSYSSLGDFVSE 644
>AF440101-1|AAL40266.1| 1608|Homo sapiens insulinoma-glucagonoma
protein 20 pro-apoptotic splice variant protein.
Length = 1608
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/45 (44%), Positives = 21/45 (46%)
Frame = -2
Query: 577 QLVNVLPTPPSHSSDSETTQQSFSTFKPPSYSPTSYDSNIDKVSE 443
QL L PP SDSE T S S S +SY S D VSE
Sbjct: 600 QLAEALSVPPERDSDSEPTDDSGSDSMDYDDSSSSYSSLGDFVSE 644
>AF440100-1|AAL40265.1| 1647|Homo sapiens insulinoma-glucagonoma
protein 20 protein.
Length = 1647
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/45 (44%), Positives = 21/45 (46%)
Frame = -2
Query: 577 QLVNVLPTPPSHSSDSETTQQSFSTFKPPSYSPTSYDSNIDKVSE 443
QL L PP SDSE T S S S +SY S D VSE
Sbjct: 600 QLAEALSVPPERDSDSEPTDDSGSDSMDYDDSSSSYSSLGDFVSE 644
>AB002356-1|BAA20814.2| 1584|Homo sapiens KIAA0358 protein.
Length = 1584
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/45 (44%), Positives = 21/45 (46%)
Frame = -2
Query: 577 QLVNVLPTPPSHSSDSETTQQSFSTFKPPSYSPTSYDSNIDKVSE 443
QL L PP SDSE T S S S +SY S D VSE
Sbjct: 603 QLAEALSVPPERDSDSEPTDDSGSDSMDYDDSSSSYSSLGDFVSE 647
>BC102028-1|AAI02029.1| 280|Homo sapiens FBXO16 protein protein.
Length = 280
Score = 31.9 bits (69), Expect = 3.1
Identities = 25/88 (28%), Positives = 41/88 (46%)
Frame = +2
Query: 497 FKSGKRLLRCFRVRAVTRWRW*DIYELPCLWLLSVATVPFKNSFSPTGETWPFFRHHWYV 676
F + L RC +V W W ++ EL LW+L + +FSPT PF + W
Sbjct: 91 FLDPRSLCRCAQVC----WHWKNLAELDQLWMLKCLRFNWYINFSPT----PFEQGIWKK 142
Query: 677 LFV*QYKQLRQITQYATVSHCSVVVSEL 760
++ K+L IT+ T V++++
Sbjct: 143 HYIQMVKEL-HITKPKTPPKDGFVIADV 169
>BC102027-1|AAI02028.1| 280|Homo sapiens FBXO16 protein protein.
Length = 280
Score = 31.9 bits (69), Expect = 3.1
Identities = 25/88 (28%), Positives = 41/88 (46%)
Frame = +2
Query: 497 FKSGKRLLRCFRVRAVTRWRW*DIYELPCLWLLSVATVPFKNSFSPTGETWPFFRHHWYV 676
F + L RC +V W W ++ EL LW+L + +FSPT PF + W
Sbjct: 91 FLDPRSLCRCAQVC----WHWKNLAELDQLWMLKCLRFNWYINFSPT----PFEQGIWKK 142
Query: 677 LFV*QYKQLRQITQYATVSHCSVVVSEL 760
++ K+L IT+ T V++++
Sbjct: 143 HYIQMVKEL-HITKPKTPPKDGFVIADV 169
>BC102026-1|AAI02027.1| 292|Homo sapiens F-box protein 16 protein.
Length = 292
Score = 31.9 bits (69), Expect = 3.1
Identities = 25/88 (28%), Positives = 41/88 (46%)
Frame = +2
Query: 497 FKSGKRLLRCFRVRAVTRWRW*DIYELPCLWLLSVATVPFKNSFSPTGETWPFFRHHWYV 676
F + L RC +V W W ++ EL LW+L + +FSPT PF + W
Sbjct: 103 FLDPRSLCRCAQVC----WHWKNLAELDQLWMLKCLRFNWYINFSPT----PFEQGIWKK 154
Query: 677 LFV*QYKQLRQITQYATVSHCSVVVSEL 760
++ K+L IT+ T V++++
Sbjct: 155 HYIQMVKEL-HITKPKTPPKDGFVIADV 181
>BC074986-1|AAH74986.1| 292|Homo sapiens F-box protein 16 protein.
Length = 292
Score = 31.9 bits (69), Expect = 3.1
Identities = 25/88 (28%), Positives = 41/88 (46%)
Frame = +2
Query: 497 FKSGKRLLRCFRVRAVTRWRW*DIYELPCLWLLSVATVPFKNSFSPTGETWPFFRHHWYV 676
F + L RC +V W W ++ EL LW+L + +FSPT PF + W
Sbjct: 103 FLDPRSLCRCAQVC----WHWKNLAELDQLWMLKCLRFNWYINFSPT----PFEQGIWKK 154
Query: 677 LFV*QYKQLRQITQYATVSHCSVVVSEL 760
++ K+L IT+ T V++++
Sbjct: 155 HYIQMVKEL-HITKPKTPPKDGFVIADV 181
>AF453435-1|AAN76812.1| 292|Homo sapiens F-box protein 16 protein.
Length = 292
Score = 31.9 bits (69), Expect = 3.1
Identities = 25/88 (28%), Positives = 41/88 (46%)
Frame = +2
Query: 497 FKSGKRLLRCFRVRAVTRWRW*DIYELPCLWLLSVATVPFKNSFSPTGETWPFFRHHWYV 676
F + L RC +V W W ++ EL LW+L + +FSPT PF + W
Sbjct: 103 FLDPRSLCRCAQVC----WHWKNLAELDQLWMLKCLRFNWYINFSPT----PFEQGIWKK 154
Query: 677 LFV*QYKQLRQITQYATVSHCSVVVSEL 760
++ K+L IT+ T V++++
Sbjct: 155 HYIQMVKEL-HITKPKTPPKDGFVIADV 181
>U47924-15|AAB51321.1| 1190|Homo sapiens DRPLA protein.
Length = 1190
Score = 30.3 bits (65), Expect = 9.3
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -2
Query: 553 PPSHSSDSETTQQSFSTFKP-PSYSPTSYDSNIDKVSENQSEWNDVRPPSYSQI 395
PPS T +Q ++F+P PS +PT Y + ++ + + PP + Q+
Sbjct: 166 PPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQL 219
>U23851-1|AAB50276.1| 1184|Homo sapiens atrophin-1 protein.
Length = 1184
Score = 30.3 bits (65), Expect = 9.3
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -2
Query: 553 PPSHSSDSETTQQSFSTFKP-PSYSPTSYDSNIDKVSENQSEWNDVRPPSYSQI 395
PPS T +Q ++F+P PS +PT Y + ++ + + PP + Q+
Sbjct: 165 PPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQL 218
>D38529-1|BAA07534.1| 1182|Homo sapiens DRPLA protein protein.
Length = 1182
Score = 30.3 bits (65), Expect = 9.3
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -2
Query: 553 PPSHSSDSETTQQSFSTFKP-PSYSPTSYDSNIDKVSENQSEWNDVRPPSYSQI 395
PPS T +Q ++F+P PS +PT Y + ++ + + PP + Q+
Sbjct: 166 PPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQL 219
>D31840-1|BAA06626.1| 1185|Homo sapiens DRPLA protein.
Length = 1185
Score = 30.3 bits (65), Expect = 9.3
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -2
Query: 553 PPSHSSDSETTQQSFSTFKP-PSYSPTSYDSNIDKVSENQSEWNDVRPPSYSQI 395
PPS T +Q ++F+P PS +PT Y + ++ + + PP + Q+
Sbjct: 166 PPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQL 219
>BC051795-1|AAH51795.1| 1191|Homo sapiens atrophin 1 protein.
Length = 1191
Score = 30.3 bits (65), Expect = 9.3
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -2
Query: 553 PPSHSSDSETTQQSFSTFKP-PSYSPTSYDSNIDKVSENQSEWNDVRPPSYSQI 395
PPS T +Q ++F+P PS +PT Y + ++ + + PP + Q+
Sbjct: 166 PPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQL 219
>AC007679-1|AAX93069.1| 922|Homo sapiens unknown protein.
Length = 922
Score = 30.3 bits (65), Expect = 9.3
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = -2
Query: 580 GQLVNV-LPTPPSHSSDSETTQQSFSTFKPPSYS 482
G L++ L TPP+ +S+SETTQ +F+T P S S
Sbjct: 806 GHLLSTSLSTPPT-TSNSETTQPAFATVTPSSSS 838
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,482,953
Number of Sequences: 237096
Number of extensions: 2336132
Number of successful extensions: 5451
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 5063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5444
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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