Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11e07
(799 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001598-1|AAN71353.1| 1020|Drosophila melanogaster RE29621p pro... 141 1e-33
AY069503-1|AAL39648.1| 630|Drosophila melanogaster LD22648p pro... 141 1e-33
AF312231-1|AAG33625.1| 946|Drosophila melanogaster proteosome s... 141 1e-33
AF145303-1|AAF08384.1| 1020|Drosophila melanogaster 26S proteaso... 141 1e-33
AE014297-4344|AAF56868.1| 1020|Drosophila melanogaster CG11888-P... 141 1e-33
>BT001598-1|AAN71353.1| 1020|Drosophila melanogaster RE29621p protein.
Length = 1020
Score = 141 bits (341), Expect = 1e-33
Identities = 91/209 (43%), Positives = 112/209 (53%), Gaps = 15/209 (7%)
Frame = -2
Query: 798 FPLAHCLSLAFTPTCIISLNSDLXMPQLELKSNSKPSLYAYPAPLXXXXXXXXXRVTTAV 619
FPLAH LSLAFTPTC+I LNSDL MP++E KS +KPSLYAYPAPL +V TAV
Sbjct: 789 FPLAHTLSLAFTPTCVIGLNSDLKMPKMEYKSAAKPSLYAYPAPLEEKKSEEREKVATAV 848
Query: 618 LSIAAAKARRRAHGTDGXXXXXXXXXXSK----MEVDEE----------EKKPSKSPNIT 481
LSIAA + +RR + SK ++ DEE EK K
Sbjct: 849 LSIAA-RQKRRENADKKEDEKMDVDEDSKEGAAVKKDEEAKADEKMVTDEKPKKKDEKEK 907
Query: 480 VHSKSXXXXXXXXXXXXXXXXXXXXXXXXXXXPTFEILSNPARVMRQQLKNLTIVEGSGF 301
+ PT EIL NPARV+RQQLK L++++G +
Sbjct: 908 KKEEDKEKEAAGTSSEKDKDKEKDKKEKKEPEPTSEILQNPARVLRQQLKVLSVIDGQSY 967
Query: 300 TPLKDITIGGIVMLNHTGEGE-QVLVEPV 217
PLKD+TIGGI++ HTG+ E Q LVEPV
Sbjct: 968 EPLKDVTIGGIIVFQHTGKAEDQELVEPV 996
>AY069503-1|AAL39648.1| 630|Drosophila melanogaster LD22648p protein.
Length = 630
Score = 141 bits (341), Expect = 1e-33
Identities = 91/209 (43%), Positives = 112/209 (53%), Gaps = 15/209 (7%)
Frame = -2
Query: 798 FPLAHCLSLAFTPTCIISLNSDLXMPQLELKSNSKPSLYAYPAPLXXXXXXXXXRVTTAV 619
FPLAH LSLAFTPTC+I LNSDL MP++E KS +KPSLYAYPAPL +V TAV
Sbjct: 399 FPLAHTLSLAFTPTCVIGLNSDLKMPKMEYKSAAKPSLYAYPAPLEEKKSEEREKVATAV 458
Query: 618 LSIAAAKARRRAHGTDGXXXXXXXXXXSK----MEVDEE----------EKKPSKSPNIT 481
LSIAA + +RR + SK ++ DEE EK K
Sbjct: 459 LSIAA-RQKRRENADKKEDEKMDVDEDSKEGAAVKKDEEAKADEKMVTDEKPKKKDEKEK 517
Query: 480 VHSKSXXXXXXXXXXXXXXXXXXXXXXXXXXXPTFEILSNPARVMRQQLKNLTIVEGSGF 301
+ PT EIL NPARV+RQQLK L++++G +
Sbjct: 518 KKEEDKEKEAAGTSSEKDKDKEKDKKEKKEPEPTSEILQNPARVLRQQLKVLSVIDGQSY 577
Query: 300 TPLKDITIGGIVMLNHTGEGE-QVLVEPV 217
PLKD+TIGGI++ HTG+ E Q LVEPV
Sbjct: 578 EPLKDVTIGGIIVFQHTGKAEDQELVEPV 606
>AF312231-1|AAG33625.1| 946|Drosophila melanogaster proteosome
subunit RPN2 protein.
Length = 946
Score = 141 bits (341), Expect = 1e-33
Identities = 91/209 (43%), Positives = 112/209 (53%), Gaps = 15/209 (7%)
Frame = -2
Query: 798 FPLAHCLSLAFTPTCIISLNSDLXMPQLELKSNSKPSLYAYPAPLXXXXXXXXXRVTTAV 619
FPLAH LSLAFTPTC+I LNSDL MP++E KS +KPSLYAYPAPL +V TAV
Sbjct: 715 FPLAHTLSLAFTPTCVIGLNSDLKMPKMEYKSAAKPSLYAYPAPLEEKKSEEREKVATAV 774
Query: 618 LSIAAAKARRRAHGTDGXXXXXXXXXXSK----MEVDEE----------EKKPSKSPNIT 481
LSIAA + +RR + SK ++ DEE EK K
Sbjct: 775 LSIAA-RQKRRENADKKEDEKMDVDEDSKEGAAVKKDEEAKADEKMVTDEKPKKKDEKEK 833
Query: 480 VHSKSXXXXXXXXXXXXXXXXXXXXXXXXXXXPTFEILSNPARVMRQQLKNLTIVEGSGF 301
+ PT EIL NPARV+RQQLK L++++G +
Sbjct: 834 KKEEDKEKEAAGTSSEKDKDKEKDKKEKKEPEPTSEILQNPARVLRQQLKVLSVIDGQSY 893
Query: 300 TPLKDITIGGIVMLNHTGEGE-QVLVEPV 217
PLKD+TIGGI++ HTG+ E Q LVEPV
Sbjct: 894 EPLKDVTIGGIIVFQHTGKAEDQELVEPV 922
>AF145303-1|AAF08384.1| 1020|Drosophila melanogaster 26S proteasome
regulatory complexsubunit p110 protein.
Length = 1020
Score = 141 bits (341), Expect = 1e-33
Identities = 91/209 (43%), Positives = 112/209 (53%), Gaps = 15/209 (7%)
Frame = -2
Query: 798 FPLAHCLSLAFTPTCIISLNSDLXMPQLELKSNSKPSLYAYPAPLXXXXXXXXXRVTTAV 619
FPLAH LSLAFTPTC+I LNSDL MP++E KS +KPSLYAYPAPL +V TAV
Sbjct: 789 FPLAHTLSLAFTPTCVIGLNSDLKMPKMEYKSAAKPSLYAYPAPLEEKKSEEREKVATAV 848
Query: 618 LSIAAAKARRRAHGTDGXXXXXXXXXXSK----MEVDEE----------EKKPSKSPNIT 481
LSIAA + +RR + SK ++ DEE EK K
Sbjct: 849 LSIAA-RQKRRENADKKEDEKMDVDEDSKEGAAVKKDEEAKADEKMVTDEKPKKKDEKEK 907
Query: 480 VHSKSXXXXXXXXXXXXXXXXXXXXXXXXXXXPTFEILSNPARVMRQQLKNLTIVEGSGF 301
+ PT EIL NPARV+RQQLK L++++G +
Sbjct: 908 KKEEDKEKEAAGTSSEKDKDKEKDKKEKKEPEPTSEILQNPARVLRQQLKVLSVIDGQSY 967
Query: 300 TPLKDITIGGIVMLNHTGEGE-QVLVEPV 217
PLKD+TIGGI++ HTG+ E Q LVEPV
Sbjct: 968 EPLKDVTIGGIIVFQHTGKAEDQELVEPV 996
>AE014297-4344|AAF56868.1| 1020|Drosophila melanogaster CG11888-PA
protein.
Length = 1020
Score = 141 bits (341), Expect = 1e-33
Identities = 91/209 (43%), Positives = 112/209 (53%), Gaps = 15/209 (7%)
Frame = -2
Query: 798 FPLAHCLSLAFTPTCIISLNSDLXMPQLELKSNSKPSLYAYPAPLXXXXXXXXXRVTTAV 619
FPLAH LSLAFTPTC+I LNSDL MP++E KS +KPSLYAYPAPL +V TAV
Sbjct: 789 FPLAHTLSLAFTPTCVIGLNSDLKMPKMEYKSAAKPSLYAYPAPLEEKKSEEREKVATAV 848
Query: 618 LSIAAAKARRRAHGTDGXXXXXXXXXXSK----MEVDEE----------EKKPSKSPNIT 481
LSIAA + +RR + SK ++ DEE EK K
Sbjct: 849 LSIAA-RQKRRENADKKEDEKMDVDEDSKEGAAVKKDEEAKADEKMVTDEKPKKKDEKEK 907
Query: 480 VHSKSXXXXXXXXXXXXXXXXXXXXXXXXXXXPTFEILSNPARVMRQQLKNLTIVEGSGF 301
+ PT EIL NPARV+RQQLK L++++G +
Sbjct: 908 KKEEDKEKEAAGTSSEKDKDKEKDKKEKKEPEPTSEILQNPARVLRQQLKVLSVIDGQSY 967
Query: 300 TPLKDITIGGIVMLNHTGEGE-QVLVEPV 217
PLKD+TIGGI++ HTG+ E Q LVEPV
Sbjct: 968 EPLKDVTIGGIIVFQHTGKAEDQELVEPV 996
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,626,620
Number of Sequences: 53049
Number of extensions: 504543
Number of successful extensions: 1288
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1288
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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