Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11e05
(774 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein. 32 0.52
AF003135-5|AAK18990.1| 678|Caenorhabditis elegans Hypothetical ... 32 0.52
AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical ... 32 0.52
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 31 0.91
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 31 1.2
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 31 1.2
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 31 1.2
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 1.2
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 1.2
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 31 1.2
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 31 1.2
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 31 1.2
U47144-5|AAB52621.2| 1410|Caenorhabditis elegans Hypothetical pr... 30 2.1
U41019-2|AAA82328.1| 518|Caenorhabditis elegans Hypothetical pr... 30 2.1
AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical ... 30 2.1
AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical ... 30 2.1
AF106575-14|AAC78163.2| 365|Caenorhabditis elegans Serpentine r... 30 2.1
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 29 2.8
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 29 2.8
U97009-5|AAC69036.2| 505|Caenorhabditis elegans Nuclear hormone... 29 2.8
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 29 2.8
AL021501-1|CAA16414.2| 352|Caenorhabditis elegans Hypothetical ... 29 2.8
Z81537-2|CAB04373.1| 682|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF043700-8|AAB97574.2| 374|Caenorhabditis elegans Hypothetical ... 29 3.7
AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical ... 29 3.7
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 29 4.9
U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z81083-3|CAB03104.1| 559|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z35640-6|CAA84702.2| 1226|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z35639-9|CAA84700.2| 1226|Caenorhabditis elegans Hypothetical pr... 28 6.4
U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical pr... 28 6.4
AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein. 28 6.4
AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein. 28 6.4
AF068714-9|AAC17810.1| 87|Caenorhabditis elegans Hypothetical ... 28 6.4
AF016665-2|AAC71181.1| 662|Caenorhabditis elegans Hypothetical ... 28 6.4
Z82051-8|CAB04814.1| 349|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z81042-5|CAD44090.1| 331|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z81042-4|CAB02796.1| 272|Caenorhabditis elegans Hypothetical pr... 28 8.5
U41994-12|AAK31522.1| 118|Caenorhabditis elegans Hypothetical p... 28 8.5
AL021501-2|CAA16415.2| 356|Caenorhabditis elegans Hypothetical ... 28 8.5
AF047665-3|AAC04456.3| 566|Caenorhabditis elegans Hypothetical ... 28 8.5
AF036705-9|AAO91724.1| 686|Caenorhabditis elegans Hypothetical ... 28 8.5
>AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein.
Length = 1666
Score = 31.9 bits (69), Expect = 0.52
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = -2
Query: 500 NLQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRRRLHELQMQVIIDAKNKK 345
NL+K A++ E + +LD+L+ K N ++RR EL V ++ +K
Sbjct: 1441 NLEKTNTALMSYEAVNEELDRLDAKQNTMTIDEQRRYRELLNVVAEQSRARK 1492
>AF003135-5|AAK18990.1| 678|Caenorhabditis elegans Hypothetical
protein W03F11.6b protein.
Length = 678
Score = 31.9 bits (69), Expect = 0.52
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = -2
Query: 500 NLQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRRRLHELQMQVIIDAKNKK 345
NL+K A++ E + +LD+L+ K N ++RR EL V ++ +K
Sbjct: 459 NLEKTNTALMSYEAVNEELDRLDAKQNTMTIDEQRRYRELLNVVAEQSRARK 510
>AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical
protein W03F11.6a protein.
Length = 1658
Score = 31.9 bits (69), Expect = 0.52
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = -2
Query: 500 NLQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRRRLHELQMQVIIDAKNKK 345
NL+K A++ E + +LD+L+ K N ++RR EL V ++ +K
Sbjct: 1439 NLEKTNTALMSYEAVNEELDRLDAKQNTMTIDEQRRYRELLNVVAEQSRARK 1490
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 31.1 bits (67), Expect = 0.91
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 376 ICNSCSLLRSKNCFWLCFFSNLSNF 450
+CNSC+LL+ +N F FF NL +
Sbjct: 520 LCNSCNLLKRRNNFIPVFFHNLRGY 544
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 30.7 bits (66), Expect = 1.2
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = -2
Query: 611 LSINFWERYVIQSELSLMKCSLHSLKDTINNIGNAYXNLQKEINAILKTEYIGTKLDKLE 432
++ F QSEL+ K L LK N+G+ I+ + E + T+ D+LE
Sbjct: 1299 ITSKFVRHQAFQSELAANKERLDQLKHAAINLGDDKPEYHGTIDP--QIEELATQWDELE 1356
Query: 431 KKHNQK-QFLDRRRLHELQMQVIIDAK 354
K +K Q L +L +Q I D K
Sbjct: 1357 KTTEEKGQKLFDANRQQLYVQSIADMK 1383
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 30.7 bits (66), Expect = 1.2
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = -2
Query: 611 LSINFWERYVIQSELSLMKCSLHSLKDTINNIGNAYXNLQKEINAILKTEYIGTKLDKLE 432
++ F QSEL+ K L LK N+G+ I+ + E + T+ D+LE
Sbjct: 1299 ITSKFVRHQAFQSELAANKERLDQLKHAAINLGDDKPEYHGTIDP--QIEELATQWDELE 1356
Query: 431 KKHNQK-QFLDRRRLHELQMQVIIDAK 354
K +K Q L +L +Q I D K
Sbjct: 1357 KTTEEKGQKLFDANRQQLYVQSIADMK 1383
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 30.7 bits (66), Expect = 1.2
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = -2
Query: 497 LQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRR--RLHELQMQVIIDAKNKKHNHYSVQ 324
LQKE + LK E KL K E KQ D + + ++ +++ DAK KK H ++
Sbjct: 7129 LQKENDDKLKQE-ADAKLQK-ENDDKLKQEADAKLKKENDDKLKQEADAKLKKEKHDKLK 7186
Query: 323 EENDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKTQQ 177
+E D+K N + ++A + K ++ +K DK +Q
Sbjct: 7187 QEADAKLQKENDDKLKQEADAKLQKENDDKLKQEADAKLQKEKDDKLKQ 7235
Score = 30.3 bits (65), Expect = 1.6
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Frame = -2
Query: 491 KEINAILKTEYIGTKLDK-LEKKHNQKQFLDRRRLHELQMQVIIDAKNKKHNHYSVQEEN 315
KE + K KL K + KH Q+ ++ ++ +++ DAK KK N +++E
Sbjct: 6954 KETSVESKETQADAKLKKEKDDKHKQEADAKLQKENDDKLKQEADAKLKKENDDKLKQEA 7013
Query: 314 DSKKPIRNATTITRKA-----------LKPTAVGEEKKYNKDLRVLKCDDKFDKTQQCND 168
D+K N + ++A LK A + KK N D + D K K ND
Sbjct: 7014 DAKLKKENDDKLKQEADAKLKKENDDKLKQEAAAKLKKENDDKLKQEADAKLKKE---ND 7070
Query: 167 D 165
D
Sbjct: 7071 D 7071
Score = 29.5 bits (63), Expect = 2.8
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 2/117 (1%)
Frame = -2
Query: 509 AYXNLQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRRRLHEL--QMQVIIDAKNKKHNH 336
A LQKE + LK E KL K EK KQ D + E +++ DAK +K
Sbjct: 7949 ANAKLQKEKDDKLKQE-ADAKLQK-EKDDKLKQEADAKLKKEKDDKLKQEADAKLQKEKD 8006
Query: 335 YSVQEENDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKTQQCNDD 165
+++E D+K + ++A ++ + ++ +K DK +Q DD
Sbjct: 8007 DKLKQEADAKLKKEKDDKLKQEADAKLQKEKDDNFKQEANAKLQKEKDDKLKQEKDD 8063
Score = 28.7 bits (61), Expect = 4.9
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = -2
Query: 497 LQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRR--RLHELQMQVIIDAKNKKHNHYSVQ 324
LQKE + LK E KL K E KQ D + + ++ +++ DAK +K N ++
Sbjct: 7081 LQKENDDKLKQE-ADAKLQK-ENDDKLKQEADAKLQKENDDKLKQEADAKLQKENDDKLK 7138
Query: 323 EENDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKTQQ 177
+E D+K N + ++A + K ++ +K DK +Q
Sbjct: 7139 QEADAKLQKENDDKLKQEADAKLKKENDDKLKQEADAKLKKEKHDKLKQ 7187
Score = 28.3 bits (60), Expect = 6.4
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Frame = -2
Query: 497 LQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRRRLHELQMQVIIDAKNKKHNHYSVQEE 318
L+KE + LK E + + K Q+ ++ ++ +++ DAK KK N +++E
Sbjct: 7017 LKKENDDKLKQEADAKLKKENDDKLKQEAAAKLKKENDDKLKQEADAKLKKENDDKLKQE 7076
Query: 317 NDSKKPIRNATTITRKA-LKPTAVGEEK-KYNKDLRVLK-CDDKFD-----KTQQCNDDP 162
D+K N + ++A K ++K K D ++ K DDK K Q+ NDD
Sbjct: 7077 ADAKLQKENDDKLKQEADAKLQKENDDKLKQEADAKLQKENDDKLKQEADAKLQKENDDK 7136
Query: 161 TMGQSRF*TYKYSNDIISTYSLIK-KKES 78
++ K ++D + + K KKE+
Sbjct: 7137 LKQEADAKLQKENDDKLKQEADAKLKKEN 7165
Score = 28.3 bits (60), Expect = 6.4
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 2/112 (1%)
Frame = -2
Query: 497 LQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRRRLHEL--QMQVIIDAKNKKHNHYSVQ 324
LQKE + LK E KL K E KQ D + E +++ DAK +K N ++
Sbjct: 7145 LQKENDDKLKQE-ADAKLKK-ENDDKLKQEADAKLKKEKHDKLKQEADAKLQKENDDKLK 7202
Query: 323 EENDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKTQQCND 168
+E D+K N + ++A ++ K ++ +K DK +Q D
Sbjct: 7203 QEADAKLQKENDDKLKQEADAKLQKEKDDKLKQEADAKLKKEKDDKLKQDAD 7254
Score = 28.3 bits (60), Expect = 6.4
Identities = 28/107 (26%), Positives = 52/107 (48%)
Frame = -2
Query: 497 LQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRRRLHELQMQVIIDAKNKKHNHYSVQEE 318
L++E +A LK E K DKL+++ + K L + +L+ + DAK +K N +++E
Sbjct: 7169 LKQEADAKLKKE----KHDKLKQEADAK--LQKENDDKLKQEA--DAKLQKENDDKLKQE 7220
Query: 317 NDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKTQQ 177
D+K + ++A ++ K +D +K DK +Q
Sbjct: 7221 ADAKLQKEKDDKLKQEADAKLKKEKDDKLKQDADAKLQKEKDDKLKQ 7267
Score = 28.3 bits (60), Expect = 6.4
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = -2
Query: 497 LQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRRRLHEL--QMQVIIDAKNKKHNHYSVQ 324
L+KE + LK E G KL K EK + KQ D + E +++ DAK KK ++
Sbjct: 8281 LKKEKDNKLKQEADG-KLKK-EKDNKLKQEADAKLKKEKDDKLKQEADAKLKKDKDDKLK 8338
Query: 323 EENDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKTQQ 177
+E D+K + ++A ++ K ++ DK DK +Q
Sbjct: 8339 QEADAKLKKEKDDKLKQEADAKLKKEKDDKLKQEADAKLKKDKDDKLKQ 8387
Score = 27.9 bits (59), Expect = 8.5
Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 2/109 (1%)
Frame = -2
Query: 497 LQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRRRLHEL--QMQVIIDAKNKKHNHYSVQ 324
LQKE + LK E KL K EK KQ D + E +++ DAK KK ++
Sbjct: 7225 LQKEKDDKLKQE-ADAKLKK-EKDDKLKQDADAKLQKEKDDKLKQEADAKLKKEKDDKLK 7282
Query: 323 EENDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKTQQ 177
E D+K + ++A ++ + KD +K DK +Q
Sbjct: 7283 HEADAKLQKEKDDKLKQEADAKLKKEKDDRLKKDADAKLQKEKDDKLKQ 7331
Score = 27.9 bits (59), Expect = 8.5
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = -2
Query: 497 LQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRRRLHEL--QMQVIIDAKNKKHNHYSVQ 324
L+KE + LK E G KL K EK + KQ D + E +++ DAK KK ++
Sbjct: 7841 LKKEKDNKLKQEADG-KLKK-EKDNKLKQEADAKLKKEKDDKLKQEADAKLKKEKDDKLK 7898
Query: 323 EENDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKTQQ 177
+E D+K + ++A ++ K ++ DK DK +Q
Sbjct: 7899 QEADAKLKKDKDDKLKQEADAKLKKEKDDKLKQEADAKLKKDKDDKLKQ 7947
Score = 27.9 bits (59), Expect = 8.5
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Frame = -2
Query: 500 NLQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRRRLHEL--QMQVIIDAKNKKHNHYSV 327
N ++E NA L+ E KL K EK KQ D + E +++ DAK KK +
Sbjct: 8040 NFKQEANAKLQKEK-DDKL-KQEKDDKLKQEADAKLKKEKDDKLKQEADAKLKKDKDDKL 8097
Query: 326 QEENDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKTQQ 177
++E D+K + ++A ++ K ++ DK DK +Q
Sbjct: 8098 KQEADAKLKKEKDDKLKQEADAKLKKEKDDKLKQEADAKLKKDKDDKLKQ 8147
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 30.7 bits (66), Expect = 1.2
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = -2
Query: 497 LQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRR--RLHELQMQVIIDAKNKKHNHYSVQ 324
LQKE + LK E KL K E KQ D + + ++ +++ DAK KK H ++
Sbjct: 7149 LQKENDDKLKQE-ADAKLQK-ENDDKLKQEADAKLKKENDDKLKQEADAKLKKEKHDKLK 7206
Query: 323 EENDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKTQQ 177
+E D+K N + ++A + K ++ +K DK +Q
Sbjct: 7207 QEADAKLQKENDDKLKQEADAKLQKENDDKLKQEADAKLQKEKDDKLKQ 7255
Score = 30.3 bits (65), Expect = 1.6
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Frame = -2
Query: 491 KEINAILKTEYIGTKLDK-LEKKHNQKQFLDRRRLHELQMQVIIDAKNKKHNHYSVQEEN 315
KE + K KL K + KH Q+ ++ ++ +++ DAK KK N +++E
Sbjct: 6974 KETSVESKETQADAKLKKEKDDKHKQEADAKLQKENDDKLKQEADAKLKKENDDKLKQEA 7033
Query: 314 DSKKPIRNATTITRKA-----------LKPTAVGEEKKYNKDLRVLKCDDKFDKTQQCND 168
D+K N + ++A LK A + KK N D + D K K ND
Sbjct: 7034 DAKLKKENDDKLKQEADAKLKKENDDKLKQEAAAKLKKENDDKLKQEADAKLKKE---ND 7090
Query: 167 D 165
D
Sbjct: 7091 D 7091
Score = 29.5 bits (63), Expect = 2.8
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 2/117 (1%)
Frame = -2
Query: 509 AYXNLQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRRRLHEL--QMQVIIDAKNKKHNH 336
A LQKE + LK E KL K EK KQ D + E +++ DAK +K
Sbjct: 7969 ANAKLQKEKDDKLKQE-ADAKLQK-EKDDKLKQEADAKLKKEKDDKLKQEADAKLQKEKD 8026
Query: 335 YSVQEENDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKTQQCNDD 165
+++E D+K + ++A ++ + ++ +K DK +Q DD
Sbjct: 8027 DKLKQEADAKLKKEKDDKLKQEADAKLQKEKDDNFKQEANAKLQKEKDDKLKQEKDD 8083
Score = 28.7 bits (61), Expect = 4.9
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = -2
Query: 497 LQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRR--RLHELQMQVIIDAKNKKHNHYSVQ 324
LQKE + LK E KL K E KQ D + + ++ +++ DAK +K N ++
Sbjct: 7101 LQKENDDKLKQE-ADAKLQK-ENDDKLKQEADAKLQKENDDKLKQEADAKLQKENDDKLK 7158
Query: 323 EENDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKTQQ 177
+E D+K N + ++A + K ++ +K DK +Q
Sbjct: 7159 QEADAKLQKENDDKLKQEADAKLKKENDDKLKQEADAKLKKEKHDKLKQ 7207
Score = 28.3 bits (60), Expect = 6.4
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Frame = -2
Query: 497 LQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRRRLHELQMQVIIDAKNKKHNHYSVQEE 318
L+KE + LK E + + K Q+ ++ ++ +++ DAK KK N +++E
Sbjct: 7037 LKKENDDKLKQEADAKLKKENDDKLKQEAAAKLKKENDDKLKQEADAKLKKENDDKLKQE 7096
Query: 317 NDSKKPIRNATTITRKA-LKPTAVGEEK-KYNKDLRVLK-CDDKFD-----KTQQCNDDP 162
D+K N + ++A K ++K K D ++ K DDK K Q+ NDD
Sbjct: 7097 ADAKLQKENDDKLKQEADAKLQKENDDKLKQEADAKLQKENDDKLKQEADAKLQKENDDK 7156
Query: 161 TMGQSRF*TYKYSNDIISTYSLIK-KKES 78
++ K ++D + + K KKE+
Sbjct: 7157 LKQEADAKLQKENDDKLKQEADAKLKKEN 7185
Score = 28.3 bits (60), Expect = 6.4
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 2/112 (1%)
Frame = -2
Query: 497 LQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRRRLHEL--QMQVIIDAKNKKHNHYSVQ 324
LQKE + LK E KL K E KQ D + E +++ DAK +K N ++
Sbjct: 7165 LQKENDDKLKQE-ADAKLKK-ENDDKLKQEADAKLKKEKHDKLKQEADAKLQKENDDKLK 7222
Query: 323 EENDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKTQQCND 168
+E D+K N + ++A ++ K ++ +K DK +Q D
Sbjct: 7223 QEADAKLQKENDDKLKQEADAKLQKEKDDKLKQEADAKLKKEKDDKLKQDAD 7274
Score = 28.3 bits (60), Expect = 6.4
Identities = 28/107 (26%), Positives = 52/107 (48%)
Frame = -2
Query: 497 LQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRRRLHELQMQVIIDAKNKKHNHYSVQEE 318
L++E +A LK E K DKL+++ + K L + +L+ + DAK +K N +++E
Sbjct: 7189 LKQEADAKLKKE----KHDKLKQEADAK--LQKENDDKLKQEA--DAKLQKENDDKLKQE 7240
Query: 317 NDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKTQQ 177
D+K + ++A ++ K +D +K DK +Q
Sbjct: 7241 ADAKLQKEKDDKLKQEADAKLKKEKDDKLKQDADAKLQKEKDDKLKQ 7287
Score = 28.3 bits (60), Expect = 6.4
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = -2
Query: 497 LQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRRRLHEL--QMQVIIDAKNKKHNHYSVQ 324
L+KE + LK E G KL K EK + KQ D + E +++ DAK KK ++
Sbjct: 8301 LKKEKDNKLKQEADG-KLKK-EKDNKLKQEADAKLKKEKDDKLKQEADAKLKKDKDDKLK 8358
Query: 323 EENDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKTQQ 177
+E D+K + ++A ++ K ++ DK DK +Q
Sbjct: 8359 QEADAKLKKEKDDKLKQEADAKLKKEKDDKLKQEADAKLKKDKDDKLKQ 8407
Score = 27.9 bits (59), Expect = 8.5
Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 2/109 (1%)
Frame = -2
Query: 497 LQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRRRLHEL--QMQVIIDAKNKKHNHYSVQ 324
LQKE + LK E KL K EK KQ D + E +++ DAK KK ++
Sbjct: 7245 LQKEKDDKLKQE-ADAKLKK-EKDDKLKQDADAKLQKEKDDKLKQEADAKLKKEKDDKLK 7302
Query: 323 EENDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKTQQ 177
E D+K + ++A ++ + KD +K DK +Q
Sbjct: 7303 HEADAKLQKEKDDKLKQEADAKLKKEKDDRLKKDADAKLQKEKDDKLKQ 7351
Score = 27.9 bits (59), Expect = 8.5
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = -2
Query: 497 LQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRRRLHEL--QMQVIIDAKNKKHNHYSVQ 324
L+KE + LK E G KL K EK + KQ D + E +++ DAK KK ++
Sbjct: 7861 LKKEKDNKLKQEADG-KLKK-EKDNKLKQEADAKLKKEKDDKLKQEADAKLKKEKDDKLK 7918
Query: 323 EENDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKTQQ 177
+E D+K + ++A ++ K ++ DK DK +Q
Sbjct: 7919 QEADAKLKKDKDDKLKQEADAKLKKEKDDKLKQEADAKLKKDKDDKLKQ 7967
Score = 27.9 bits (59), Expect = 8.5
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Frame = -2
Query: 500 NLQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRRRLHEL--QMQVIIDAKNKKHNHYSV 327
N ++E NA L+ E KL K EK KQ D + E +++ DAK KK +
Sbjct: 8060 NFKQEANAKLQKEK-DDKL-KQEKDDKLKQEADAKLKKEKDDKLKQEADAKLKKDKDDKL 8117
Query: 326 QEENDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKTQQ 177
++E D+K + ++A ++ K ++ DK DK +Q
Sbjct: 8118 KQEADAKLKKEKDDKLKQEADAKLKKEKDDKLKQEADAKLKKDKDDKLKQ 8167
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 30.7 bits (66), Expect = 1.2
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = -2
Query: 497 LQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRR--RLHELQMQVIIDAKNKKHNHYSVQ 324
LQKE + LK E KL K E KQ D + + ++ +++ DAK KK H ++
Sbjct: 7149 LQKENDDKLKQE-ADAKLQK-ENDDKLKQEADAKLKKENDDKLKQEADAKLKKEKHDKLK 7206
Query: 323 EENDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKTQQ 177
+E D+K N + ++A + K ++ +K DK +Q
Sbjct: 7207 QEADAKLQKENDDKLKQEADAKLQKENDDKLKQEADAKLQKEKDDKLKQ 7255
Score = 30.3 bits (65), Expect = 1.6
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Frame = -2
Query: 491 KEINAILKTEYIGTKLDK-LEKKHNQKQFLDRRRLHELQMQVIIDAKNKKHNHYSVQEEN 315
KE + K KL K + KH Q+ ++ ++ +++ DAK KK N +++E
Sbjct: 6974 KETSVESKETQADAKLKKEKDDKHKQEADAKLQKENDDKLKQEADAKLKKENDDKLKQEA 7033
Query: 314 DSKKPIRNATTITRKA-----------LKPTAVGEEKKYNKDLRVLKCDDKFDKTQQCND 168
D+K N + ++A LK A + KK N D + D K K ND
Sbjct: 7034 DAKLKKENDDKLKQEADAKLKKENDDKLKQEAAAKLKKENDDKLKQEADAKLKKE---ND 7090
Query: 167 D 165
D
Sbjct: 7091 D 7091
Score = 29.5 bits (63), Expect = 2.8
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 2/117 (1%)
Frame = -2
Query: 509 AYXNLQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRRRLHEL--QMQVIIDAKNKKHNH 336
A LQKE + LK E KL K EK KQ D + E +++ DAK +K
Sbjct: 7969 ANAKLQKEKDDKLKQE-ADAKLQK-EKDDKLKQEADAKLKKEKDDKLKQEADAKLQKEKD 8026
Query: 335 YSVQEENDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKTQQCNDD 165
+++E D+K + ++A ++ + ++ +K DK +Q DD
Sbjct: 8027 DKLKQEADAKLKKEKDDKLKQEADAKLQKEKDDNFKQEANAKLQKEKDDKLKQEKDD 8083
Score = 28.7 bits (61), Expect = 4.9
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = -2
Query: 497 LQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRR--RLHELQMQVIIDAKNKKHNHYSVQ 324
LQKE + LK E KL K E KQ D + + ++ +++ DAK +K N ++
Sbjct: 7101 LQKENDDKLKQE-ADAKLQK-ENDDKLKQEADAKLQKENDDKLKQEADAKLQKENDDKLK 7158
Query: 323 EENDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKTQQ 177
+E D+K N + ++A + K ++ +K DK +Q
Sbjct: 7159 QEADAKLQKENDDKLKQEADAKLKKENDDKLKQEADAKLKKEKHDKLKQ 7207
Score = 28.3 bits (60), Expect = 6.4
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Frame = -2
Query: 497 LQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRRRLHELQMQVIIDAKNKKHNHYSVQEE 318
L+KE + LK E + + K Q+ ++ ++ +++ DAK KK N +++E
Sbjct: 7037 LKKENDDKLKQEADAKLKKENDDKLKQEAAAKLKKENDDKLKQEADAKLKKENDDKLKQE 7096
Query: 317 NDSKKPIRNATTITRKA-LKPTAVGEEK-KYNKDLRVLK-CDDKFD-----KTQQCNDDP 162
D+K N + ++A K ++K K D ++ K DDK K Q+ NDD
Sbjct: 7097 ADAKLQKENDDKLKQEADAKLQKENDDKLKQEADAKLQKENDDKLKQEADAKLQKENDDK 7156
Query: 161 TMGQSRF*TYKYSNDIISTYSLIK-KKES 78
++ K ++D + + K KKE+
Sbjct: 7157 LKQEADAKLQKENDDKLKQEADAKLKKEN 7185
Score = 28.3 bits (60), Expect = 6.4
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 2/112 (1%)
Frame = -2
Query: 497 LQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRRRLHEL--QMQVIIDAKNKKHNHYSVQ 324
LQKE + LK E KL K E KQ D + E +++ DAK +K N ++
Sbjct: 7165 LQKENDDKLKQE-ADAKLKK-ENDDKLKQEADAKLKKEKHDKLKQEADAKLQKENDDKLK 7222
Query: 323 EENDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKTQQCND 168
+E D+K N + ++A ++ K ++ +K DK +Q D
Sbjct: 7223 QEADAKLQKENDDKLKQEADAKLQKEKDDKLKQEADAKLKKEKDDKLKQDAD 7274
Score = 28.3 bits (60), Expect = 6.4
Identities = 28/107 (26%), Positives = 52/107 (48%)
Frame = -2
Query: 497 LQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRRRLHELQMQVIIDAKNKKHNHYSVQEE 318
L++E +A LK E K DKL+++ + K L + +L+ + DAK +K N +++E
Sbjct: 7189 LKQEADAKLKKE----KHDKLKQEADAK--LQKENDDKLKQEA--DAKLQKENDDKLKQE 7240
Query: 317 NDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKTQQ 177
D+K + ++A ++ K +D +K DK +Q
Sbjct: 7241 ADAKLQKEKDDKLKQEADAKLKKEKDDKLKQDADAKLQKEKDDKLKQ 7287
Score = 28.3 bits (60), Expect = 6.4
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = -2
Query: 497 LQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRRRLHEL--QMQVIIDAKNKKHNHYSVQ 324
L+KE + LK E G KL K EK + KQ D + E +++ DAK KK ++
Sbjct: 8301 LKKEKDNKLKQEADG-KLKK-EKDNKLKQEADAKLKKEKDDKLKQEADAKLKKDKDDKLK 8358
Query: 323 EENDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKTQQ 177
+E D+K + ++A ++ K ++ DK DK +Q
Sbjct: 8359 QEADAKLKKEKDDKLKQEADAKLKKEKDDKLKQEADAKLKKDKDDKLKQ 8407
Score = 27.9 bits (59), Expect = 8.5
Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 2/109 (1%)
Frame = -2
Query: 497 LQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRRRLHEL--QMQVIIDAKNKKHNHYSVQ 324
LQKE + LK E KL K EK KQ D + E +++ DAK KK ++
Sbjct: 7245 LQKEKDDKLKQE-ADAKLKK-EKDDKLKQDADAKLQKEKDDKLKQEADAKLKKEKDDKLK 7302
Query: 323 EENDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKTQQ 177
E D+K + ++A ++ + KD +K DK +Q
Sbjct: 7303 HEADAKLQKEKDDKLKQEADAKLKKEKDDRLKKDADAKLQKEKDDKLKQ 7351
Score = 27.9 bits (59), Expect = 8.5
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = -2
Query: 497 LQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRRRLHEL--QMQVIIDAKNKKHNHYSVQ 324
L+KE + LK E G KL K EK + KQ D + E +++ DAK KK ++
Sbjct: 7861 LKKEKDNKLKQEADG-KLKK-EKDNKLKQEADAKLKKEKDDKLKQEADAKLKKEKDDKLK 7918
Query: 323 EENDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKTQQ 177
+E D+K + ++A ++ K ++ DK DK +Q
Sbjct: 7919 QEADAKLKKDKDDKLKQEADAKLKKEKDDKLKQEADAKLKKDKDDKLKQ 7967
Score = 27.9 bits (59), Expect = 8.5
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Frame = -2
Query: 500 NLQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRRRLHEL--QMQVIIDAKNKKHNHYSV 327
N ++E NA L+ E KL K EK KQ D + E +++ DAK KK +
Sbjct: 8060 NFKQEANAKLQKEK-DDKL-KQEKDDKLKQEADAKLKKEKDDKLKQEADAKLKKDKDDKL 8117
Query: 326 QEENDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKTQQ 177
++E D+K + ++A ++ K ++ DK DK +Q
Sbjct: 8118 KQEADAKLKKEKDDKLKQEADAKLKKEKDDKLKQEADAKLKKDKDDKLKQ 8167
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 30.7 bits (66), Expect = 1.2
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = -2
Query: 611 LSINFWERYVIQSELSLMKCSLHSLKDTINNIGNAYXNLQKEINAILKTEYIGTKLDKLE 432
++ F QSEL+ K L LK N+G+ I+ + E + T+ D+LE
Sbjct: 1299 ITSKFVRHQAFQSELAANKERLDQLKHAAINLGDDKPEYHGTIDP--QIEELATQWDELE 1356
Query: 431 KKHNQK-QFLDRRRLHELQMQVIIDAK 354
K +K Q L +L +Q I D K
Sbjct: 1357 KTTEEKGQKLFDANRQQLYVQSIADMK 1383
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 30.7 bits (66), Expect = 1.2
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = -2
Query: 611 LSINFWERYVIQSELSLMKCSLHSLKDTINNIGNAYXNLQKEINAILKTEYIGTKLDKLE 432
++ F QSEL+ K L LK N+G+ I+ + E + T+ D+LE
Sbjct: 1299 ITSKFVRHQAFQSELAANKERLDQLKHAAINLGDDKPEYHGTIDP--QIEELATQWDELE 1356
Query: 431 KKHNQK-QFLDRRRLHELQMQVIIDAK 354
K +K Q L +L +Q I D K
Sbjct: 1357 KTTEEKGQKLFDANRQQLYVQSIADMK 1383
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 30.7 bits (66), Expect = 1.2
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = -2
Query: 611 LSINFWERYVIQSELSLMKCSLHSLKDTINNIGNAYXNLQKEINAILKTEYIGTKLDKLE 432
++ F QSEL+ K L LK N+G+ I+ + E + T+ D+LE
Sbjct: 1299 ITSKFVRHQAFQSELAANKERLDQLKHAAINLGDDKPEYHGTIDP--QIEELATQWDELE 1356
Query: 431 KKHNQK-QFLDRRRLHELQMQVIIDAK 354
K +K Q L +L +Q I D K
Sbjct: 1357 KTTEEKGQKLFDANRQQLYVQSIADMK 1383
>U47144-5|AAB52621.2| 1410|Caenorhabditis elegans Hypothetical protein
ZC53.4 protein.
Length = 1410
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 379 CNSCSLLRSKNCFWLCFFSNLSNF 450
C SC++LR KN F FF NL +
Sbjct: 1007 CGSCNILRRKNNFIPVFFHNLKGY 1030
>U41019-2|AAA82328.1| 518|Caenorhabditis elegans Hypothetical
protein C04E7.3 protein.
Length = 518
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -2
Query: 356 KNKKHNHYSVQEENDSKKPIRNATTITRKALKPTAVGEEKK 234
+ K N +Q+ K+P T+ +KA KPT++ E KK
Sbjct: 121 QQKYRNPQKLQQSTIKKRPKPETTSGPKKASKPTSLSEPKK 161
>AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical
protein Y47D3B.5b protein.
Length = 1136
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/68 (22%), Positives = 30/68 (44%)
Frame = -2
Query: 362 DAKNKKHNHYSVQEENDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKT 183
+ K ++ + S+ ND + I +AT++ ++ + K N + V +CD T
Sbjct: 545 ELKLQRDDATSISRSNDFRDSISDATSLPMDSMSSPVAKKRNKRNTECAVCQCDLPMGNT 604
Query: 182 QQCNDDPT 159
+ D T
Sbjct: 605 AEFKADGT 612
>AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical
protein Y47D3B.5a protein.
Length = 1088
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/68 (22%), Positives = 30/68 (44%)
Frame = -2
Query: 362 DAKNKKHNHYSVQEENDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKT 183
+ K ++ + S+ ND + I +AT++ ++ + K N + V +CD T
Sbjct: 545 ELKLQRDDATSISRSNDFRDSISDATSLPMDSMSSPVAKKRNKRNTECAVCQCDLPMGNT 604
Query: 182 QQCNDDPT 159
+ D T
Sbjct: 605 AEFKADGT 612
>AF106575-14|AAC78163.2| 365|Caenorhabditis elegans Serpentine
receptor, class w protein98 protein.
Length = 365
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 262 FSALRVIVVAFLIGFLLSFS-SCTE*WLCFLFLASIITCICNSCSLLRSKNCFWLCFFSN 438
F + V+ IG L F S T+ +L+LA+ I +CNS ++ + + LCFF +
Sbjct: 282 FMTVSFFVLELPIGISLIFQVSYTD--FGYLYLATYINHVCNSIFIINATSHGVLCFFMS 339
Query: 439 LSNFVPMYSVFRI 477
+ + + +I
Sbjct: 340 TQYRLTVAQILKI 352
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Frame = -2
Query: 578 QSELSLMKCSLHSLKDTINNIGNA---YXNLQKEINAILKTEYIGTKLDKLEKKHNQKQF 408
Q ++ M+ S+H L+DT+ + NL+K+++ I Y GT+ ++L+++ + +
Sbjct: 265 QKKIEEMRTSIHELEDTLTSFKKTELERQNLKKQLSLIRVEPYFGTE-EELKREIEEFRG 323
Query: 407 LDRRRLHELQMQVIIDAKNKKHNHYSVQEENDSKKPIRN 291
+ R E + ++ K N+ QE + K N
Sbjct: 324 SEGRSYGEERARI---QKKIGKNNQERQELSQKKTEFEN 359
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4a protein.
Length = 1298
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Frame = -2
Query: 578 QSELSLMKCSLHSLKDTINNIGNA---YXNLQKEINAILKTEYIGTKLDKLEKKHNQKQF 408
Q ++ M+ S+H L+DT+ + NL+K+++ I Y GT+ ++L+++ + +
Sbjct: 251 QKKIEEMRTSIHELEDTLTSFKKTELERQNLKKQLSLIRVEPYFGTE-EELKREIEEFRG 309
Query: 407 LDRRRLHELQMQVIIDAKNKKHNHYSVQEENDSKKPIRN 291
+ R E + ++ K N+ QE + K N
Sbjct: 310 SEGRSYGEERARI---QKKIGKNNQERQELSQKKTEFEN 345
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Frame = -2
Query: 578 QSELSLMKCSLHSLKDTINNIGNA---YXNLQKEINAILKTEYIGTKLDKLEKKHNQKQF 408
Q ++ M+ S+H L+DT+ + NL+K+++ I Y GT+ ++L+++ + +
Sbjct: 251 QKKIEEMRTSIHELEDTLTSFKKTELERQNLKKQLSLIRVEPYFGTE-EELKREIEEFRG 309
Query: 407 LDRRRLHELQMQVIIDAKNKKHNHYSVQEENDSKKPIRN 291
+ R E + ++ K N+ QE + K N
Sbjct: 310 SEGRSYGEERARI---QKKIGKNNQERQELSQKKTEFEN 345
>U97009-5|AAC69036.2| 505|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 220 protein.
Length = 505
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 280 IVVAFLIGFLLSFSSCTE*WL-CFLFLASIITCICNSCSLLRSKNCF 417
+V + ++G +SF SC E ++ C S C+C C R K CF
Sbjct: 138 LVFSLILGMAISFRSCMEIFVKCLAKGGSGNECLCKPC---RLKKCF 181
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/91 (24%), Positives = 44/91 (48%)
Frame = -2
Query: 440 KLEKKHNQKQFLDRRRLHELQMQVIIDAKNKKHNHYSVQEENDSKKPIRNATTITRKALK 261
K E K ++K+ D ++ E + + K++K + +++ SKK +++ + K K
Sbjct: 111 KDEDKKDEKKDADEKKDEEKKDDKKDEKKDEKKDEKKDEKKEKSKKSKKSSKSKKSKKSK 170
Query: 260 PTAVGEEKKYNKDLRVLKCDDKFDKTQQCND 168
EEKK + K DDK + ++ +D
Sbjct: 171 REKKDEEKKEDDKKEDDKKDDKKEDEKKDDD 201
>AL021501-1|CAA16414.2| 352|Caenorhabditis elegans Hypothetical
protein Y61B8A.1 protein.
Length = 352
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 421 LCFFSNLSNFVPMYSVFRIAFISFCRLXYAFPILFI 528
LC FS + F+PMY VF + S+ + IL +
Sbjct: 80 LCTFSTVYYFLPMYGVFFVGVFSWFGIPNVLQILLV 115
>Z81537-2|CAB04373.1| 682|Caenorhabditis elegans Hypothetical
protein F41D3.2 protein.
Length = 682
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 223 SLLYFFSSPTAVGFSALRVIVVAFLIGFLLSFSSCT 330
SLL+F SP + F+++ V F+IG L+ C+
Sbjct: 183 SLLHFNFSPAPIAFNSVFARVWQFIIGMLVYLKGCS 218
>AF043700-8|AAB97574.2| 374|Caenorhabditis elegans Hypothetical
protein K09H9.1 protein.
Length = 374
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = -2
Query: 311 SKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCD---DKFDKTQQCNDDPT 159
SK+P RN TTI R L+ + N+ ++ CD + F ++ C D T
Sbjct: 250 SKEPQRNTTTIFRMHLQDANFSQ--SVNRVFNIILCDEIPEIFHSSENCKSDDT 301
>AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical
protein M151.4 protein.
Length = 591
Score = 29.1 bits (62), Expect = 3.7
Identities = 26/99 (26%), Positives = 42/99 (42%)
Frame = -2
Query: 581 IQSELSLMKCSLHSLKDTINNIGNAYXNLQKEINAILKTEYIGTKLDKLEKKHNQKQFLD 402
+ EL M LK+ + + +E + E + L +LE K +K+ L+
Sbjct: 319 LTEELQSMHLKNKELKNNVTTENSRATGAVQEAQVL--QEKLQQALKELEGK--KKELLE 374
Query: 401 RRRLHELQMQVIIDAKNKKHNHYSVQEENDSKKPIRNAT 285
+ H+L+M D K+H E + KK RNAT
Sbjct: 375 QENAHKLRMDQFEDDTKKRHKKEIKALEVEVKK--RNAT 411
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = -2
Query: 623 LAGHLSINFWERYVIQSELSLMKCSLHSLKDTINNIGNAYXNLQKEINAILKTEYIGTKL 444
L +L+ N E +I+SEL+ ++C +D ++ L+ IN++ ++
Sbjct: 279 LRQNLAENHLELAMIKSELAQVRCEFDQKQDELSARRGILFQLE-PINSLSSSDQASHAT 337
Query: 443 DKLEKKHNQKQFL--DRRRLHE 384
++ E Q Q L R+LHE
Sbjct: 338 EESESVRKQLQLLFDANRKLHE 359
>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical
protein F21C10.7 protein.
Length = 2541
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = -2
Query: 581 IQSELSLMKCSLHSLKDTINNIGNAYXNLQK--EINAIL-KTEYIGTKLDKLEKK 426
IQ ++ K + K T+ + N ++ IN ++ KT+Y+ T+LD+L +K
Sbjct: 630 IQKRIASFKSAADMHKSTLETLKEENQNEEQISRINVLIDKTDYVKTRLDQLSQK 684
>Z81083-3|CAB03104.1| 559|Caenorhabditis elegans Hypothetical
protein F44F1.4 protein.
Length = 559
Score = 28.3 bits (60), Expect = 6.4
Identities = 31/152 (20%), Positives = 66/152 (43%), Gaps = 6/152 (3%)
Frame = -2
Query: 527 INNIGNAYXNLQKEINAILKTEYIGTKLDKLEKKHNQKQFLDRRRLHELQMQVII---DA 357
I+N N Y +QKE + + EY+ ++ + Q +++L E + Q ++ +
Sbjct: 341 ISNATNDYEAIQKEKYSSITDEYVVLPAAPVKTFAVRIQEEKQKKLDEEEQQKVLKIQEL 400
Query: 356 KNKKHNHY--SVQEENDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKT 183
+ +K S+ E D KK + K L K++ D+ K D+ K
Sbjct: 401 EKQKDEQIMKSMLELEDMKKLLEEK---DEKILMHVGKQRVMKFDMDILKNKLDESIMKI 457
Query: 182 QQCND-DPTMGQSRF*TYKYSNDIISTYSLIK 90
++ ND + + +++ ++ S + Y ++K
Sbjct: 458 KEANDHNLELEKAKLIAFEASREEKKQYDILK 489
>Z35640-6|CAA84702.2| 1226|Caenorhabditis elegans Hypothetical
protein F43D9.1 protein.
Length = 1226
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = -2
Query: 449 KLDKLEKKHNQKQFLDRRRLHELQMQVIIDAKNKKHNHY---SVQEEND-SKKPIRNATT 282
K ++ EKK ++ +RR L E ++Q + K ++HNH S+ E ++P TT
Sbjct: 81 KREEKEKKQKERMERERRELEEKRVQE-DEMKKEEHNHTVHPSLGERTSYVEEPPSTTTT 139
Query: 281 ITRKALK 261
+ R+ K
Sbjct: 140 LDRRDRK 146
>Z35639-9|CAA84700.2| 1226|Caenorhabditis elegans Hypothetical
protein F43D9.1 protein.
Length = 1226
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = -2
Query: 449 KLDKLEKKHNQKQFLDRRRLHELQMQVIIDAKNKKHNHY---SVQEEND-SKKPIRNATT 282
K ++ EKK ++ +RR L E ++Q + K ++HNH S+ E ++P TT
Sbjct: 81 KREEKEKKQKERMERERRELEEKRVQE-DEMKKEEHNHTVHPSLGERTSYVEEPPSTTTT 139
Query: 281 ITRKALK 261
+ R+ K
Sbjct: 140 LDRRDRK 146
>U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical
protein F13H8.2 protein.
Length = 929
Score = 28.3 bits (60), Expect = 6.4
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Frame = -2
Query: 494 QKEINAILKTEYIGTKLDKLEKKHNQKQFLDRRRLHELQMQVIIDAKNKKHNHYSVQEEN 315
+ ++ A + YI TKL + ++ + L H+ + V + A +K + Y V E
Sbjct: 245 EDDVLANMANRYITTKLRGRVIRQSKGRALQLVATHDDRFLVCVGA-DKVADVYRVFSET 303
Query: 314 DSKKPI-RNATTITRKALKPTAVGEEKKYNKDLRVL 210
+S K + + + RKA T E KD+ +L
Sbjct: 304 ESAKRLTKKLKSAKRKATSDTTTVNEDDVAKDVTIL 339
>AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein.
Length = 1487
Score = 28.3 bits (60), Expect = 6.4
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Frame = -2
Query: 479 AILKTEYIGTKLDKLEKK--HNQKQFLDRRRLHELQMQVIIDAKNKKHNHYSVQEENDSK 306
A+++ ++ K D K H +D + +L + V ID +N K ++V + ++
Sbjct: 359 AVVQWDFESQKADSFVVKYMHEPGNRMDTEKWKQLPV-VSIDKENPKR--FAVVSDLNAH 415
Query: 305 KPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKTQQCNDDPTMGQSRF*TYKY 126
KP + L + E+ +NK +RV F + C+D PT+ +S TY
Sbjct: 416 KPYAFCVLAVKNNL---TLNEQ--FNK-VRVTNYMTNFQRQGPCSDPPTVLESVTPTYMV 469
Query: 125 SN 120
N
Sbjct: 470 QN 471
>AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein.
Length = 2200
Score = 28.3 bits (60), Expect = 6.4
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Frame = -2
Query: 479 AILKTEYIGTKLDKLEKK--HNQKQFLDRRRLHELQMQVIIDAKNKKHNHYSVQEENDSK 306
A+++ ++ K D K H +D + +L + V ID +N K ++V + ++
Sbjct: 1072 AVVQWDFESQKADSFVVKYMHEPGNRMDTEKWKQLPV-VSIDKENPKR--FAVVSDLNAH 1128
Query: 305 KPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDKTQQCNDDPTMGQSRF*TYKY 126
KP + L + E+ +NK +RV F + C+D PT+ +S TY
Sbjct: 1129 KPYAFCVLAVKNNL---TLNEQ--FNK-VRVTNYMTNFQRQGPCSDPPTVLESVTPTYMV 1182
Query: 125 SN 120
N
Sbjct: 1183 QN 1184
>AF068714-9|AAC17810.1| 87|Caenorhabditis elegans Hypothetical
protein B0348.1 protein.
Length = 87
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +1
Query: 373 CICNSCSLLRSK--NCFWLCFFSNLSNFVPM 459
C CN + + S+ NC+W+ FF F P+
Sbjct: 26 CQCNHTTRMESRRGNCWWIAFFIGFFLFFPI 56
>AF016665-2|AAC71181.1| 662|Caenorhabditis elegans Hypothetical
protein C49D10.8 protein.
Length = 662
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 223 SLLYFFSSPTAVGFSALRVIVVAFLIGFLL 312
SL++++SSP V F+ + V FLIG ++
Sbjct: 180 SLVFYYSSPPTVAFNNMFARVWQFLIGMIV 209
>Z82051-8|CAB04814.1| 349|Caenorhabditis elegans Hypothetical
protein T23D5.11 protein.
Length = 349
Score = 27.9 bits (59), Expect = 8.5
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = +1
Query: 220 RSLLYFFSSPTAVGFSALRVIVVAFLIGFLLSFSSC--TE*WLCFLFLASII--TCICNS 387
R+L+ ++PT + F + ++ A +SF SC + + + SII +C+
Sbjct: 235 RALVIQITAPTIILFCPVFFMIYAPFADLEISFPSCIIQSGFTVYPAIDSIIMMSCVSEY 294
Query: 388 CSLLRSKNCFWLCFFSNLSNFV 453
L+SKNC + SNF+
Sbjct: 295 GRALKSKNCNLIVIKLKGSNFL 316
>Z81042-5|CAD44090.1| 331|Caenorhabditis elegans Hypothetical
protein C27H6.4b protein.
Length = 331
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = -2
Query: 467 TEYIGTKLDKLEKKHNQKQFLDR 399
TEY+GTK +K+E+ + K++LDR
Sbjct: 197 TEYLGTK-EKIEEGKHCKEYLDR 218
>Z81042-4|CAB02796.1| 272|Caenorhabditis elegans Hypothetical
protein C27H6.4a protein.
Length = 272
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = -2
Query: 467 TEYIGTKLDKLEKKHNQKQFLDR 399
TEY+GTK +K+E+ + K++LDR
Sbjct: 138 TEYLGTK-EKIEEGKHCKEYLDR 159
>U41994-12|AAK31522.1| 118|Caenorhabditis elegans Hypothetical
protein F59A6.2 protein.
Length = 118
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -2
Query: 329 VQEENDSKKPIRNATTITRKALKPTAVGEEKKYNKDLRVLKCDDKFDK 186
+Q+++D K+ R RK LK E+K+ +KD + D+K D+
Sbjct: 70 IQKQSDQKREERKLAAQKRKELKQKQKEEKKEESKDEKDGADDEKNDE 117
>AL021501-2|CAA16415.2| 356|Caenorhabditis elegans Hypothetical
protein Y61B8A.2 protein.
Length = 356
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 421 LCFFSNLSNFVPMYSVFRIAFISFCRLXYAFPILFI 528
LC S + F+PMY F + +S+ + F IL +
Sbjct: 80 LCTLSTVYFFLPMYGTFFVGVLSWFGVPNTFQILLV 115
>AF047665-3|AAC04456.3| 566|Caenorhabditis elegans Hypothetical
protein T23E1.1 protein.
Length = 566
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -3
Query: 262 NQQPLEKKKNITKTFGY*NAMTNLIKLSSVMMILQWDSPDFKRI 131
NQ+ + +N KTFG + N+ K + L DSP F ++
Sbjct: 232 NQRSQDNLENSLKTFGGSEKVWNIAKNNGCPTFLNTDSPKFSKM 275
>AF036705-9|AAO91724.1| 686|Caenorhabditis elegans Hypothetical
protein F37C4.2 protein.
Length = 686
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 223 SLLYFFSSPTAVGFSALRVIVVAFLIGFLLSFSSCTE 333
SL+YF+S P V F+++ + F+IG ++ T+
Sbjct: 181 SLVYFYSVPGTVAFNSVFARIWQFMIGMVVYLLGTTK 217
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,385,878
Number of Sequences: 27780
Number of extensions: 338025
Number of successful extensions: 1266
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1250
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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