Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11d22
(338 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 21 4.1
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 4.1
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 20 7.1
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 20 7.1
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 20 7.1
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 20 7.1
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 20 7.1
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 20 7.1
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 20 7.1
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 20 7.1
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 20 7.1
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 20 7.1
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 20 7.1
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 21.0 bits (42), Expect = 4.1
Identities = 8/36 (22%), Positives = 18/36 (50%)
Frame = -3
Query: 186 RFQHYLPTSHQLLKTLQPGSMFEFGMSKVSTSDVRY 79
+ + ++P + LL + P F ++V T ++Y
Sbjct: 224 KLKQFMPRLYDLLGYVMPDRTFAPFFTRVVTDTIKY 259
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.0 bits (42), Expect = 4.1
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = -3
Query: 216 HLHTTRCHSPRFQHYLPTSH 157
H H + +P QH P +H
Sbjct: 431 HHHHSHAATPHHQHSTPLAH 450
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 20.2 bits (40), Expect = 7.1
Identities = 7/25 (28%), Positives = 11/25 (44%), Gaps = 1/25 (4%)
Frame = +3
Query: 165 WADSVESAANDT-SSCVDVCNSSNI 236
W + D +C+ VCN N+
Sbjct: 40 WKEVEYEVVRDAYDNCITVCNMENV 64
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 7.1
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 168 ADSVESAANDTSSCVDVCNSSN 233
A ++E + N+T +C SSN
Sbjct: 194 AVNIEKSENETKTCKKYAISSN 215
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 7.1
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 168 ADSVESAANDTSSCVDVCNSSN 233
A ++E + N+T +C SSN
Sbjct: 194 AVNIEKSENETKTCKKYAISSN 215
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 7.1
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 168 ADSVESAANDTSSCVDVCNSSN 233
A ++E + N+T +C SSN
Sbjct: 194 AVNIEKSENETKTCKKYAISSN 215
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 7.1
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 168 ADSVESAANDTSSCVDVCNSSN 233
A ++E + N+T +C SSN
Sbjct: 194 AVNIEKSENETKTCKKYAISSN 215
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 7.1
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 168 ADSVESAANDTSSCVDVCNSSN 233
A ++E + N+T +C SSN
Sbjct: 194 AVNIEKSENETKTCKKYAISSN 215
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 7.1
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 168 ADSVESAANDTSSCVDVCNSSN 233
A ++E + N+T +C SSN
Sbjct: 194 AVNIEKSENETKTCKKYAISSN 215
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 20.2 bits (40), Expect = 7.1
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 168 ADSVESAANDTSSCVDVCNSSN 233
A ++E + N+T +C SSN
Sbjct: 194 AVNIEKSENETKTCKKYAISSN 215
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 20.2 bits (40), Expect = 7.1
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 168 ADSVESAANDTSSCVDVCNSSN 233
A ++E + N+T +C SSN
Sbjct: 194 AVNIEKSENETKTCKKYAISSN 215
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 20.2 bits (40), Expect = 7.1
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +3
Query: 24 EINRCVAHDGWKWKGVRRHSGRRSLTP 104
EI + DG+ W+G+R + + P
Sbjct: 619 EIQKHKWFDGFNWEGLRARTLEPPIMP 645
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 20.2 bits (40), Expect = 7.1
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 33 RCVAHDGWKWKG 68
R + DG KWKG
Sbjct: 2 RWINRDGEKWKG 13
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,535
Number of Sequences: 438
Number of extensions: 2025
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7715466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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