Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11d14
(792 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22957-1|CAA80533.1| 812|Homo sapiens myosin I homologue protein. 35 0.29
Y07759-2|CAA69036.1| 1828|Homo sapiens mysoin heavy chain 12 pro... 35 0.39
Y07759-1|CAA69035.1| 1855|Homo sapiens mysoin heavy chain 12 pro... 35 0.39
U90942-1|AAD00702.1| 1855|Homo sapiens myosin heavy chain 12 pro... 35 0.39
BC146790-1|AAI46791.1| 1460|Homo sapiens centrosomal protein 170... 35 0.39
BC078155-1|AAH78155.1| 417|Homo sapiens CEP170 protein protein. 35 0.39
AL606534-4|CAI12944.1| 1584|Homo sapiens centrosomal protein 170... 35 0.39
AL606534-3|CAI12943.1| 1486|Homo sapiens centrosomal protein 170... 35 0.39
AL606534-2|CAI12945.1| 1460|Homo sapiens centrosomal protein 170... 35 0.39
AL606534-1|CAI12942.1| 1557|Homo sapiens centrosomal protein 170... 35 0.39
AB209505-1|BAD92742.1| 1409|Homo sapiens Myosin Va variant protein. 35 0.39
AB209487-1|BAD92724.1| 1409|Homo sapiens Myosin Va variant protein. 35 0.39
AB022659-1|BAA83380.1| 1460|Homo sapiens KARP-1-binding protein ... 35 0.39
AB022658-1|BAA83379.1| 1486|Homo sapiens KARP-1-binding protein ... 35 0.39
AB022657-1|BAA83378.1| 1584|Homo sapiens KARP-1-binding protein ... 35 0.39
AB007939-1|BAA32315.2| 1472|Homo sapiens KIAA0470 protein protein. 35 0.39
AC006539-3|AAD14472.1| 498|Homo sapiens BC39498_1 protein. 33 1.2
AC006539-1|AAD14471.1| 78|Homo sapiens BC39498_3 protein. 33 1.2
D86976-1|BAA13212.1| 1165|Homo sapiens KIAA0223 protein. 31 3.6
AF308066-1|AAN04658.1| 1136|Homo sapiens minor histocompatibilit... 31 3.6
AC004151-1|AAC03237.1| 996|Homo sapiens D1013901 protein. 31 3.6
BC065223-1|AAH65223.1| 1136|Homo sapiens histocompatibility (min... 31 4.8
BC035564-1|AAH35564.1| 1131|Homo sapiens HMHA1 protein protein. 31 4.8
BC146775-1|AAI46776.1| 1320|Homo sapiens TNRC15 protein protein. 31 6.3
AY176045-1|AAO46889.1| 1299|Homo sapiens Grb10 interacting GYF p... 31 6.3
AK001739-1|BAA91873.1| 1100|Homo sapiens protein ( Homo sapiens ... 31 6.3
AB014542-1|BAA31617.2| 1329|Homo sapiens KIAA0642 protein protein. 31 6.3
D50924-1|BAA09483.2| 587|Homo sapiens KIAA0134 protein. 30 8.3
BC114940-1|AAI14941.1| 831|Homo sapiens prickle homolog 1 (Dros... 30 8.3
BC114939-1|AAI14940.1| 831|Homo sapiens prickle homolog 1 (Dros... 30 8.3
BC073759-1|AAH73759.1| 300|Homo sapiens PTRF protein protein. 30 8.3
BC066123-1|AAH66123.1| 390|Homo sapiens polymerase I and transc... 30 8.3
BC037312-1|AAH37312.1| 517|Homo sapiens ATF7IP protein protein. 30 8.3
BC008849-1|AAH08849.1| 198|Homo sapiens PTRF protein protein. 30 8.3
BC004295-1|AAH04295.1| 201|Homo sapiens Unknown (protein for IM... 30 8.3
AK056499-1|BAB71198.1| 831|Homo sapiens protein ( Homo sapiens ... 30 8.3
AF399844-1|AAQ03035.1| 831|Homo sapiens REST/NRSF-interacting l... 30 8.3
AF000421-1|AAC63404.1| 204|Homo sapiens TTF-I interacting pepti... 30 8.3
>Z22957-1|CAA80533.1| 812|Homo sapiens myosin I homologue protein.
Length = 812
Score = 35.1 bits (77), Expect = 0.29
Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 5/161 (3%)
Frame = -2
Query: 719 KKVDSEGSNQKIPPRLRRNMERVEML---ARPTARRLRSLWDEKCAILPP-ERRDKIKSA 552
K + EG +LR ++ER+++ A+ R+ SL +E + E+ K
Sbjct: 311 KLTNLEGIYNSETEKLRSDLERLQLSEEEAKVATGRVLSLQEEIAKLRKDLEQTRSEKKC 370
Query: 551 LEEDYFLSPEQTEQYFQALSESSKRWSGPGGTVNRKELIDKQKEL-QQRQKWLVNFSAQV 375
+EE ++TEQ L E + +N + ++ + KE+ + +K LV + Q+
Sbjct: 371 IEEHADRYKQETEQLVSNLKEENTLLKQEKEALNHR-IVQQAKEMTETMEKKLVEETKQL 429
Query: 374 AYHLCDYIAKGQKEMLVSNRLRSIADVVLERVAEILGEPKP 252
L D + Q + +RL+ D + E + ++ PKP
Sbjct: 430 ELDLNDERLRYQNLLNEFSRLQERYDDLKEEMTLMVHVPKP 470
>Y07759-2|CAA69036.1| 1828|Homo sapiens mysoin heavy chain 12 protein.
Length = 1828
Score = 34.7 bits (76), Expect = 0.39
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 5/161 (3%)
Frame = -2
Query: 719 KKVDSEGSNQKIPPRLRRNMERVEML---ARPTARRLRSLWDEKCAILPP-ERRDKIKSA 552
K + EG +LR ++ER+++ A+ R+ SL +E + E+ K
Sbjct: 949 KLTNLEGIYNSETEKLRSDLERLQLSEEEAKVATGRVLSLQEEIAKLRKDLEQTRSEKKC 1008
Query: 551 LEEDYFLSPEQTEQYFQALSESSKRWSGPGGTVNRKELIDKQKEL-QQRQKWLVNFSAQV 375
+EE ++TEQ L E + +N + ++ + KE+ + +K LV + Q+
Sbjct: 1009 IEEHADRYKQETEQLVSNLKEENTLLKQEKEALNHR-IVQQAKEMTETMEKKLVEETKQL 1067
Query: 374 AYHLCDYIAKGQKEMLVSNRLRSIADVVLERVAEILGEPKP 252
L D + Q + +RL D + E + ++ PKP
Sbjct: 1068 ELDLNDERLRYQNLLNEFSRLEERYDDLKEEMTLMVHVPKP 1108
>Y07759-1|CAA69035.1| 1855|Homo sapiens mysoin heavy chain 12 protein.
Length = 1855
Score = 34.7 bits (76), Expect = 0.39
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 5/161 (3%)
Frame = -2
Query: 719 KKVDSEGSNQKIPPRLRRNMERVEML---ARPTARRLRSLWDEKCAILPP-ERRDKIKSA 552
K + EG +LR ++ER+++ A+ R+ SL +E + E+ K
Sbjct: 949 KLTNLEGIYNSETEKLRSDLERLQLSEEEAKVATGRVLSLQEEIAKLRKDLEQTRSEKKC 1008
Query: 551 LEEDYFLSPEQTEQYFQALSESSKRWSGPGGTVNRKELIDKQKEL-QQRQKWLVNFSAQV 375
+EE ++TEQ L E + +N + ++ + KE+ + +K LV + Q+
Sbjct: 1009 IEEHADRYKQETEQLVSNLKEENTLLKQEKEALNHR-IVQQAKEMTETMEKKLVEETKQL 1067
Query: 374 AYHLCDYIAKGQKEMLVSNRLRSIADVVLERVAEILGEPKP 252
L D + Q + +RL D + E + ++ PKP
Sbjct: 1068 ELDLNDERLRYQNLLNEFSRLEERYDDLKEEMTLMVHVPKP 1108
>U90942-1|AAD00702.1| 1855|Homo sapiens myosin heavy chain 12 protein.
Length = 1855
Score = 34.7 bits (76), Expect = 0.39
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 5/161 (3%)
Frame = -2
Query: 719 KKVDSEGSNQKIPPRLRRNMERVEML---ARPTARRLRSLWDEKCAILPP-ERRDKIKSA 552
K + EG +LR ++ER+++ A+ R+ SL +E + E+ K
Sbjct: 949 KLTNLEGIYNSETEKLRSDLERLQLSEEEAKVATGRVLSLQEEIAKLRKDLEQTRSEKKC 1008
Query: 551 LEEDYFLSPEQTEQYFQALSESSKRWSGPGGTVNRKELIDKQKEL-QQRQKWLVNFSAQV 375
+EE ++TEQ L E + +N + ++ + KE+ + +K LV + Q+
Sbjct: 1009 IEEHADRYKQETEQLVSNLKEENTLLKQEKEALNHR-IVQQAKEMTETMEKKLVEETKQL 1067
Query: 374 AYHLCDYIAKGQKEMLVSNRLRSIADVVLERVAEILGEPKP 252
L D + Q + +RL D + E + ++ PKP
Sbjct: 1068 ELDLNDERLRYQNLLNEFSRLEERYDDLKEEMTLMVHVPKP 1108
>BC146790-1|AAI46791.1| 1460|Homo sapiens centrosomal protein 170kDa
protein.
Length = 1460
Score = 34.7 bits (76), Expect = 0.39
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = -2
Query: 773 KSSKPELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSL 609
++S ELA D+++ + +V + S K PP RRN+ R+++LA+P RL SL
Sbjct: 1012 EASDSELA-DADK-ASVASEVSTTSSTSK-PPTGRRNISRIDLLAQPRRTRLGSL 1063
>BC078155-1|AAH78155.1| 417|Homo sapiens CEP170 protein protein.
Length = 417
Score = 34.7 bits (76), Expect = 0.39
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = -2
Query: 773 KSSKPELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSL 609
++S ELA D+++ + +V + S K PP RRN+ R+++LA+P RL SL
Sbjct: 20 EASDSELA-DADK-ASVASEVSTTSSTSK-PPTGRRNISRIDLLAQPRRTRLGSL 71
>AL606534-4|CAI12944.1| 1584|Homo sapiens centrosomal protein 170kDa
protein.
Length = 1584
Score = 34.7 bits (76), Expect = 0.39
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = -2
Query: 773 KSSKPELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSL 609
++S ELA D+++ + +V + S K PP RRN+ R+++LA+P RL SL
Sbjct: 1110 EASDSELA-DADK-ASVASEVSTTSSTSK-PPTGRRNISRIDLLAQPRRTRLGSL 1161
>AL606534-3|CAI12943.1| 1486|Homo sapiens centrosomal protein 170kDa
protein.
Length = 1486
Score = 34.7 bits (76), Expect = 0.39
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = -2
Query: 773 KSSKPELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSL 609
++S ELA D+++ + +V + S K PP RRN+ R+++LA+P RL SL
Sbjct: 1012 EASDSELA-DADK-ASVASEVSTTSSTSK-PPTGRRNISRIDLLAQPRRTRLGSL 1063
>AL606534-2|CAI12945.1| 1460|Homo sapiens centrosomal protein 170kDa
protein.
Length = 1460
Score = 34.7 bits (76), Expect = 0.39
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = -2
Query: 773 KSSKPELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSL 609
++S ELA D+++ + +V + S K PP RRN+ R+++LA+P RL SL
Sbjct: 1012 EASDSELA-DADK-ASVASEVSTTSSTSK-PPTGRRNISRIDLLAQPRRTRLGSL 1063
>AL606534-1|CAI12942.1| 1557|Homo sapiens centrosomal protein 170kDa
protein.
Length = 1557
Score = 34.7 bits (76), Expect = 0.39
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = -2
Query: 773 KSSKPELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSL 609
++S ELA D+++ + +V + S K PP RRN+ R+++LA+P RL SL
Sbjct: 1073 EASDSELA-DADK-ASVASEVSTTSSTSK-PPTGRRNISRIDLLAQPRRTRLGSL 1124
>AB209505-1|BAD92742.1| 1409|Homo sapiens Myosin Va variant protein.
Length = 1409
Score = 34.7 bits (76), Expect = 0.39
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 5/161 (3%)
Frame = -2
Query: 719 KKVDSEGSNQKIPPRLRRNMERVEML---ARPTARRLRSLWDEKCAILPP-ERRDKIKSA 552
K + EG +LR ++ER+++ A+ R+ SL +E + E+ K
Sbjct: 530 KLTNLEGIYNSETEKLRSDLERLQLSEEEAKVATGRVLSLQEEIAKLRKDLEQTRSEKKC 589
Query: 551 LEEDYFLSPEQTEQYFQALSESSKRWSGPGGTVNRKELIDKQKEL-QQRQKWLVNFSAQV 375
+EE ++TEQ L E + +N + ++ + KE+ + +K LV + Q+
Sbjct: 590 IEEHADRYKQETEQLVSNLKEENTLLKQEKEALNHR-IVQQAKEMTETMEKKLVEETKQL 648
Query: 374 AYHLCDYIAKGQKEMLVSNRLRSIADVVLERVAEILGEPKP 252
L D + Q + +RL D + E + ++ PKP
Sbjct: 649 ELDLNDERLRYQNLLNEFSRLEERYDDLKEEMTLMVHVPKP 689
>AB209487-1|BAD92724.1| 1409|Homo sapiens Myosin Va variant protein.
Length = 1409
Score = 34.7 bits (76), Expect = 0.39
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 5/161 (3%)
Frame = -2
Query: 719 KKVDSEGSNQKIPPRLRRNMERVEML---ARPTARRLRSLWDEKCAILPP-ERRDKIKSA 552
K + EG +LR ++ER+++ A+ R+ SL +E + E+ K
Sbjct: 530 KLTNLEGIYNSETEKLRSDLERLQLSEEEAKVATGRVLSLQEEIAKLRKDLEQTRSEKKC 589
Query: 551 LEEDYFLSPEQTEQYFQALSESSKRWSGPGGTVNRKELIDKQKEL-QQRQKWLVNFSAQV 375
+EE ++TEQ L E + +N + ++ + KE+ + +K LV + Q+
Sbjct: 590 IEEHADRYKQETEQLVSNLKEENTLLKQEKEALNHR-IVQQAKEMTETMEKKLVEETKQL 648
Query: 374 AYHLCDYIAKGQKEMLVSNRLRSIADVVLERVAEILGEPKP 252
L D + Q + +RL D + E + ++ PKP
Sbjct: 649 ELDLNDERLRYQNLLNEFSRLEERYDDLKEEMTLMVHVPKP 689
>AB022659-1|BAA83380.1| 1460|Homo sapiens KARP-1-binding protein 3
protein.
Length = 1460
Score = 34.7 bits (76), Expect = 0.39
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = -2
Query: 773 KSSKPELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSL 609
++S ELA D+++ + +V + S K PP RRN+ R+++LA+P RL SL
Sbjct: 1012 EASDSELA-DADK-ASVASEVSTTSSTSK-PPTGRRNISRIDLLAQPRRTRLGSL 1063
>AB022658-1|BAA83379.1| 1486|Homo sapiens KARP-1-binding protein 2
(KAB2) protein.
Length = 1486
Score = 34.7 bits (76), Expect = 0.39
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = -2
Query: 773 KSSKPELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSL 609
++S ELA D+++ + +V + S K PP RRN+ R+++LA+P RL SL
Sbjct: 1012 EASDSELA-DADK-ASVASEVSTTSSTSK-PPTGRRNISRIDLLAQPRRTRLGSL 1063
>AB022657-1|BAA83378.1| 1584|Homo sapiens KARP-1-binding protein 1
(KAB1) protein.
Length = 1584
Score = 34.7 bits (76), Expect = 0.39
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = -2
Query: 773 KSSKPELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSL 609
++S ELA D+++ + +V + S K PP RRN+ R+++LA+P RL SL
Sbjct: 1110 EASDSELA-DADK-ASVASEVSTTSSTSK-PPTGRRNISRIDLLAQPRRTRLGSL 1161
>AB007939-1|BAA32315.2| 1472|Homo sapiens KIAA0470 protein protein.
Length = 1472
Score = 34.7 bits (76), Expect = 0.39
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = -2
Query: 773 KSSKPELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSL 609
++S ELA D+++ + +V + S K PP RRN+ R+++LA+P RL SL
Sbjct: 1024 EASDSELA-DADK-ASVASEVSTTSSTSK-PPTGRRNISRIDLLAQPRRTRLGSL 1075
>AC006539-3|AAD14472.1| 498|Homo sapiens BC39498_1 protein.
Length = 498
Score = 33.1 bits (72), Expect = 1.2
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = -2
Query: 563 IKSALEEDYFLSPEQTEQYFQALSESSKRWSGPGGTVNRKELIDKQKELQQRQK-WLVNF 387
I+ +LEE FL+P Q Y + + E+ + G TV++ ELI + L+QRQ+ W V
Sbjct: 11 IEFSLEEWEFLNPAQQSLYRKVMLENYRNLVSLGLTVSKPELISR---LEQRQEPWNVKR 67
Query: 386 SAQVA 372
+A
Sbjct: 68 HETIA 72
>AC006539-1|AAD14471.1| 78|Homo sapiens BC39498_3 protein.
Length = 78
Score = 33.1 bits (72), Expect = 1.2
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = -2
Query: 563 IKSALEEDYFLSPEQTEQYFQALSESSKRWSGPGGTVNRKELIDKQKELQQRQK-WLVNF 387
I+ +LEE FL+P Q Y + + E+ + G TV++ ELI + L+QRQ+ W V
Sbjct: 11 IEFSLEEWEFLNPAQQSLYRKVMLENYRNLVSLGLTVSKPELISR---LEQRQEPWNVKR 67
Query: 386 SAQVA 372
+A
Sbjct: 68 HETIA 72
>D86976-1|BAA13212.1| 1165|Homo sapiens KIAA0223 protein.
Length = 1165
Score = 31.5 bits (68), Expect = 3.6
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = -2
Query: 512 QYFQALSESSKRWSGPGGTVNRKELIDKQKELQQRQKWLVNFSAQVAYHLCDYIAKGQKE 333
++ A +E + S PG + +DK++ L++ K A Y C AK QK+
Sbjct: 449 RFLVAKAEEEQAGSAPGAGSTATKTLDKRRRLEEEAKNKAE-EAMATYRTCVADAKTQKQ 507
Query: 332 MLVSNR---LRSIADVV 291
L + LR I +V+
Sbjct: 508 ELEDTKVTALRQIQEVI 524
>AF308066-1|AAN04658.1| 1136|Homo sapiens minor histocompatibility
antigen HA-1 protein.
Length = 1136
Score = 31.5 bits (68), Expect = 3.6
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = -2
Query: 512 QYFQALSESSKRWSGPGGTVNRKELIDKQKELQQRQKWLVNFSAQVAYHLCDYIAKGQKE 333
++ A +E + S PG + +DK++ L++ K A Y C AK QK+
Sbjct: 420 RFLVAKAEEEQAGSAPGAGSTATKTLDKRRRLEEEAKNKAE-EAMATYRTCVADAKTQKQ 478
Query: 332 MLVSNR---LRSIADVV 291
L + LR I +V+
Sbjct: 479 ELEDTKVTALRQIQEVI 495
>AC004151-1|AAC03237.1| 996|Homo sapiens D1013901 protein.
Length = 996
Score = 31.5 bits (68), Expect = 3.6
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = -2
Query: 512 QYFQALSESSKRWSGPGGTVNRKELIDKQKELQQRQKWLVNFSAQVAYHLCDYIAKGQKE 333
++ A +E + S PG + +DK++ L++ K A Y C AK QK+
Sbjct: 280 RFLVAKAEEEQAGSAPGAGSTATKTLDKRRRLEEEAKNKAE-EAMATYRTCVADAKTQKQ 338
Query: 332 MLVSNR---LRSIADVV 291
L + LR I +V+
Sbjct: 339 ELEDTKVTALRQIQEVI 355
>BC065223-1|AAH65223.1| 1136|Homo sapiens histocompatibility (minor)
HA-1 protein.
Length = 1136
Score = 31.1 bits (67), Expect = 4.8
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = -2
Query: 512 QYFQALSESSKRWSGPGGTVNRKELIDKQKELQQRQKWLVNFSAQVAYHLCDYIAKGQKE 333
++ A +E + S PG + +DK++ L++ K A Y C AK QK+
Sbjct: 420 RFLVAKAEEEQAGSAPGAGGTATKTLDKRRRLEEEAKNKAE-EAMATYRTCVADAKTQKQ 478
Query: 332 MLVSNR---LRSIADVV 291
L + LR I +V+
Sbjct: 479 ELEDTKVTALRQIQEVI 495
>BC035564-1|AAH35564.1| 1131|Homo sapiens HMHA1 protein protein.
Length = 1131
Score = 31.1 bits (67), Expect = 4.8
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = -2
Query: 512 QYFQALSESSKRWSGPGGTVNRKELIDKQKELQQRQKWLVNFSAQVAYHLCDYIAKGQKE 333
++ A +E + S PG + +DK++ L++ K A Y C AK QK+
Sbjct: 415 RFLVAKAEEEQAGSAPGAGGTATKTLDKRRRLEEEAKNKAE-EAMATYRTCVADAKTQKQ 473
Query: 332 MLVSNR---LRSIADVV 291
L + LR I +V+
Sbjct: 474 ELEDTKVTALRQIQEVI 490
>BC146775-1|AAI46776.1| 1320|Homo sapiens TNRC15 protein protein.
Length = 1320
Score = 30.7 bits (66), Expect = 6.3
Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 9/168 (5%)
Frame = -2
Query: 782 EPLKSSKPELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWD 603
E L+ + E+ ++ + ++ + E + +K LRR E+ L R R +
Sbjct: 780 EELRRQQEEILRRQQEEER-KRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQE 838
Query: 602 EKCAILPPERRDKIKSALEEDYFLSPE--------QTEQYFQALSESSKRWSGPGGTVNR 447
E L RR++ + +E+ E + E+ + L E+ R +
Sbjct: 839 EALRRLEERRREEEERRKQEELLRKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARLRH 898
Query: 446 KELIDKQKELQ-QRQKWLVNFSAQVAYHLCDYIAKGQKEMLVSNRLRS 306
+E K+KEL+ QRQK L+ Q L + Q++ L +L S
Sbjct: 899 EEEERKRKELEVQRQKELMRQRQQQQEALRRLQQQQQQQQLAQMKLPS 946
>AY176045-1|AAO46889.1| 1299|Homo sapiens Grb10 interacting GYF
protein 2 protein.
Length = 1299
Score = 30.7 bits (66), Expect = 6.3
Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 9/168 (5%)
Frame = -2
Query: 782 EPLKSSKPELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWD 603
E L+ + E+ ++ + ++ + E + +K LRR E+ L R R +
Sbjct: 759 EELRRQQEEILRRQQEEER-KRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQE 817
Query: 602 EKCAILPPERRDKIKSALEEDYFLSPE--------QTEQYFQALSESSKRWSGPGGTVNR 447
E L RR++ + +E+ E + E+ + L E+ R +
Sbjct: 818 EALRRLEERRREEEERRKQEELLRKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARLRH 877
Query: 446 KELIDKQKELQ-QRQKWLVNFSAQVAYHLCDYIAKGQKEMLVSNRLRS 306
+E K+KEL+ QRQK L+ Q L + Q++ L +L S
Sbjct: 878 EEEERKRKELEVQRQKELMRQRQQQQEALRRLQQQQQQQQLAQMKLPS 925
>AK001739-1|BAA91873.1| 1100|Homo sapiens protein ( Homo sapiens cDNA
FLJ10877 fis, clone NT2RP4001861. ).
Length = 1100
Score = 30.7 bits (66), Expect = 6.3
Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 9/168 (5%)
Frame = -2
Query: 782 EPLKSSKPELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWD 603
E L+ + E+ ++ + ++ + E + +K LRR E+ L R R +
Sbjct: 759 EELRRQQEEILRRQQEEER-KRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQE 817
Query: 602 EKCAILPPERRDKIKSALEEDYFLSPE--------QTEQYFQALSESSKRWSGPGGTVNR 447
E L RR++ + +E+ E + E+ + L E+ R +
Sbjct: 818 EALRRLEERRREEEERRKQEELLRKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARLRH 877
Query: 446 KELIDKQKELQ-QRQKWLVNFSAQVAYHLCDYIAKGQKEMLVSNRLRS 306
+E K+KEL+ QRQK L+ Q L + Q++ L +L S
Sbjct: 878 EEEERKRKELEVQRQKELMRQRQQQQEALRRLQQQQQQQQLAQMKLPS 925
>AB014542-1|BAA31617.2| 1329|Homo sapiens KIAA0642 protein protein.
Length = 1329
Score = 30.7 bits (66), Expect = 6.3
Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 9/168 (5%)
Frame = -2
Query: 782 EPLKSSKPELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWD 603
E L+ + E+ ++ + ++ + E + +K LRR E+ L R R +
Sbjct: 789 EELRRQQEEILRRQQEEER-KRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQE 847
Query: 602 EKCAILPPERRDKIKSALEEDYFLSPE--------QTEQYFQALSESSKRWSGPGGTVNR 447
E L RR++ + +E+ E + E+ + L E+ R +
Sbjct: 848 EALRRLEERRREEEERRKQEELLRKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARLRH 907
Query: 446 KELIDKQKELQ-QRQKWLVNFSAQVAYHLCDYIAKGQKEMLVSNRLRS 306
+E K+KEL+ QRQK L+ Q L + Q++ L +L S
Sbjct: 908 EEEERKRKELEVQRQKELMRQRQQQQEALRRLQQQQQQQQLAQMKLPS 955
>D50924-1|BAA09483.2| 587|Homo sapiens KIAA0134 protein.
Length = 587
Score = 30.3 bits (65), Expect = 8.3
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Frame = -2
Query: 683 PPRLRRNMERVEMLARPTARRLRSLWDEKCAILPPERRDKIKSAL--EEDYFLSPEQTEQ 510
PPR R +R + P+ WD C PE R ++ A EEDY + Q
Sbjct: 14 PPRTREGRDRRDHHRAPSEEEALEKWDWNC----PETRRLLEDAFFREEDYIRQGSEECQ 69
Query: 509 YFQALSESSKRW 474
F E +R+
Sbjct: 70 KFWTFFERLQRF 81
>BC114940-1|AAI14941.1| 831|Homo sapiens prickle homolog 1
(Drosophila) protein.
Length = 831
Score = 30.3 bits (65), Expect = 8.3
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = -2
Query: 533 LSPEQTEQYFQALSESSKRW-SGPGGTVNRKELIDKQKELQQRQKWLVNFSAQVAYHLCD 357
L PEQ + YF L E + + PG K+L+ + ++ + S + L
Sbjct: 40 LRPEQIQLYFACLPEEKVPYVNSPGEKHRIKQLLYQLPPHDNEVRYCQSLSEEEKKELQV 99
Query: 356 YIAKGQKEMLVSNRLRSIADVVLERVAEILG 264
+ A+ +KE L ++ ++ V+ V E G
Sbjct: 100 FSAQRKKEALGRGTIKLLSRAVMHAVCEQCG 130
>BC114939-1|AAI14940.1| 831|Homo sapiens prickle homolog 1
(Drosophila) protein.
Length = 831
Score = 30.3 bits (65), Expect = 8.3
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = -2
Query: 533 LSPEQTEQYFQALSESSKRW-SGPGGTVNRKELIDKQKELQQRQKWLVNFSAQVAYHLCD 357
L PEQ + YF L E + + PG K+L+ + ++ + S + L
Sbjct: 40 LRPEQIQLYFACLPEEKVPYVNSPGEKHRIKQLLYQLPPHDNEVRYCQSLSEEEKKELQV 99
Query: 356 YIAKGQKEMLVSNRLRSIADVVLERVAEILG 264
+ A+ +KE L ++ ++ V+ V E G
Sbjct: 100 FSAQRKKEALGRGTIKLLSRAVMHAVCEQCG 130
>BC073759-1|AAH73759.1| 300|Homo sapiens PTRF protein protein.
Length = 300
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/86 (22%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = -2
Query: 782 EPLKSSKPE-LATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLW 606
E ++ S+ E + + V KK S+ +K R R N+E+ + + + R
Sbjct: 121 EVIEESRAERIKRSGLRRVDDFKKAFSKEKMEKTKVRTRENLEKTRLKTKENLEKTRHTL 180
Query: 605 DEKC-----AILPPERRDKIKSALEE 543
+++ ++P ERR+K+K++ ++
Sbjct: 181 EKRMNKLGTRLVPAERREKLKTSRDK 206
>BC066123-1|AAH66123.1| 390|Homo sapiens polymerase I and
transcript release factor protein.
Length = 390
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/86 (22%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = -2
Query: 782 EPLKSSKPE-LATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLW 606
E ++ S+ E + + V KK S+ +K R R N+E+ + + + R
Sbjct: 211 EVIEESRAERIKRSGLRRVDDFKKAFSKEKMEKTKVRTRENLEKTRLKTKENLEKTRHTL 270
Query: 605 DEKC-----AILPPERRDKIKSALEE 543
+++ ++P ERR+K+K++ ++
Sbjct: 271 EKRMNKLGTRLVPAERREKLKTSRDK 296
>BC037312-1|AAH37312.1| 517|Homo sapiens ATF7IP protein protein.
Length = 517
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +2
Query: 224 LLDVLDSTEMVSVLPIFQRLSPAQRQ-RCFSTCSIL 328
+L+ DS E ++PI ++L+P++ + CFS S+L
Sbjct: 423 ILENTDSMETDEIIPILEKLAPSEDELTCFSKTSVL 458
>BC008849-1|AAH08849.1| 198|Homo sapiens PTRF protein protein.
Length = 198
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/86 (22%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = -2
Query: 782 EPLKSSKPE-LATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLW 606
E ++ S+ E + + V KK S+ +K R R N+E+ + + + R
Sbjct: 19 EVIEESRAERIKRSGLRRVDDFKKAFSKEKMEKTKVRTRENLEKTRLKTKENLEKTRHTL 78
Query: 605 DEKC-----AILPPERRDKIKSALEE 543
+++ ++P ERR+K+K++ ++
Sbjct: 79 EKRMNKLGTRLVPAERREKLKTSRDK 104
>BC004295-1|AAH04295.1| 201|Homo sapiens Unknown (protein for
IMAGE:3622356) protein.
Length = 201
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/86 (22%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = -2
Query: 782 EPLKSSKPE-LATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLW 606
E ++ S+ E + + V KK S+ +K R R N+E+ + + + R
Sbjct: 22 EVIEESRAERIKRSGLRRVDDFKKAFSKEKMEKTKVRTRENLEKTRLKTKENLEKTRHTL 81
Query: 605 DEKC-----AILPPERRDKIKSALEE 543
+++ ++P ERR+K+K++ ++
Sbjct: 82 EKRMNKLGTRLVPAERREKLKTSRDK 107
>AK056499-1|BAB71198.1| 831|Homo sapiens protein ( Homo sapiens
cDNA FLJ31937 fis, clone NT2RP7006527, moderately
similar to LIM-ONLY PROTEIN 6. ).
Length = 831
Score = 30.3 bits (65), Expect = 8.3
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = -2
Query: 533 LSPEQTEQYFQALSESSKRW-SGPGGTVNRKELIDKQKELQQRQKWLVNFSAQVAYHLCD 357
L PEQ + YF L E + + PG K+L+ + ++ + S + L
Sbjct: 40 LRPEQIQLYFACLPEEKVPYVNSPGEKHRIKQLLYQLPPHDNEVRYCQSLSEEEKKELQV 99
Query: 356 YIAKGQKEMLVSNRLRSIADVVLERVAEILG 264
+ A+ +KE L ++ ++ V+ V E G
Sbjct: 100 FSAQRKKEALGRGTIKLLSRAVMHAVCEQCG 130
>AF399844-1|AAQ03035.1| 831|Homo sapiens REST/NRSF-interacting lim
domain protein protein.
Length = 831
Score = 30.3 bits (65), Expect = 8.3
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = -2
Query: 533 LSPEQTEQYFQALSESSKRW-SGPGGTVNRKELIDKQKELQQRQKWLVNFSAQVAYHLCD 357
L PEQ + YF L E + + PG K+L+ + ++ + S + L
Sbjct: 40 LRPEQIQLYFACLPEEKVPYVNSPGEKHRIKQLLYQLPPHDNEVRYCQSLSEEEKKELQV 99
Query: 356 YIAKGQKEMLVSNRLRSIADVVLERVAEILG 264
+ A+ +KE L ++ ++ V+ V E G
Sbjct: 100 FSAQRKKEALGRGTIKLLSRAVMHAVCEQCG 130
>AF000421-1|AAC63404.1| 204|Homo sapiens TTF-I interacting peptide
12 protein.
Length = 204
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/86 (22%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = -2
Query: 782 EPLKSSKPE-LATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLW 606
E ++ S+ E + + V KK S+ +K R R N+E+ + + + R
Sbjct: 25 EVIEESRAERIKRSGLRRVDDFKKAFSKEKMEKTKVRTRENLEKTRLKTKENLEKTRHTL 84
Query: 605 DEKC-----AILPPERRDKIKSALEE 543
+++ ++P ERR+K+K++ ++
Sbjct: 85 EKRMNKLGTRLVPAERREKLKTSRDK 110
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,789,111
Number of Sequences: 237096
Number of extensions: 2403277
Number of successful extensions: 6078
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 5821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6078
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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