Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte11d06
         (724 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X99912-1|CAA68185.1|  949|Drosophila melanogaster 1-phosphatidyl...    30   3.7  
AY058362-1|AAL13591.1|  949|Drosophila melanogaster GH13170p pro...    30   3.7  
AE013599-3631|AAF47030.2|  949|Drosophila melanogaster CG5373-PA...    30   3.7  
AE014298-2762|AAF48879.2|  598|Drosophila melanogaster CG32540-P...    29   8.5  

>X99912-1|CAA68185.1|  949|Drosophila melanogaster
           1-phosphatidylinositol 3-kinase protein.
          Length = 949

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 19/46 (41%), Positives = 26/46 (56%)
 Frame = -2

Query: 645 MDDQGKILLDESSLTKKSLPCAHRNLSFIERNQRCPSPTSSILSSK 508
           +DD G  LLD+SSL+  S   +  + S I  NQR  S  ++I S K
Sbjct: 431 LDDNGS-LLDQSSLSDLSATSSGLHGSVIPANQRAASVLAAIKSDK 475


>AY058362-1|AAL13591.1|  949|Drosophila melanogaster GH13170p
           protein.
          Length = 949

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 19/46 (41%), Positives = 26/46 (56%)
 Frame = -2

Query: 645 MDDQGKILLDESSLTKKSLPCAHRNLSFIERNQRCPSPTSSILSSK 508
           +DD G  LLD+SSL+  S   +  + S I  NQR  S  ++I S K
Sbjct: 431 LDDNGS-LLDQSSLSDLSATSSGLHGSVIPANQRAASVLAAIKSDK 475


>AE013599-3631|AAF47030.2|  949|Drosophila melanogaster CG5373-PA
           protein.
          Length = 949

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 19/46 (41%), Positives = 26/46 (56%)
 Frame = -2

Query: 645 MDDQGKILLDESSLTKKSLPCAHRNLSFIERNQRCPSPTSSILSSK 508
           +DD G  LLD+SSL+  S   +  + S I  NQR  S  ++I S K
Sbjct: 431 LDDNGS-LLDQSSLSDLSATSSGLHGSVIPANQRAASVLAAIKSDK 475


>AE014298-2762|AAF48879.2|  598|Drosophila melanogaster CG32540-PA
           protein.
          Length = 598

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 546 RCPSPTSSILSSKRSYQPIPYSHY 475
           RC +     +S  RS  PIPYSH+
Sbjct: 397 RCGTSQVGFVSDNRSANPIPYSHF 420


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,378,902
Number of Sequences: 53049
Number of extensions: 618389
Number of successful extensions: 1678
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1678
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)