Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte11d04
         (777 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.    27   0.86 
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    25   2.0  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     25   2.6  
Z81291-1|CAB03592.1|  209|Anopheles gambiae GSTD1-5 protein prot...    25   3.5  
AF071160-3|AAC79993.1|  209|Anopheles gambiae glutathione S-tran...    25   3.5  
Z81292-1|CAB03593.1|  209|Anopheles gambiae GSTD1-6 protein prot...    24   6.0  
Z71481-1|CAA96105.1|  140|Anopheles gambiae GSTD2 protein protein.     24   6.0  
DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.       24   6.0  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   6.0  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   6.0  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   6.0  
AF071160-1|AAC79995.1|  209|Anopheles gambiae glutathione S-tran...    24   6.0  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    23   8.0  

>AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.
          Length = 115

 Score = 26.6 bits (56), Expect = 0.86
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 73  PSPMRYTCPCTQSCRETQRTKSLS 144
           P P  Y CP T+ C+ + R  S S
Sbjct: 74  PLPYMYACPGTEPCQSSDRLGSCS 97


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 7/39 (17%)
 Frame = -3

Query: 622 PFPKPIVGKPCEPPTPSGAPP-------AQRAPVAPYCH 527
           PF  P    P  PP P+ A P           PV PYC+
Sbjct: 794 PFTPPTDRTPTPPPLPATAEPMGDYMIQPSNIPVHPYCN 832


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +2

Query: 17  PTSGRRHWLFVPLHRPPAS 73
           P  GR  WL  P HRP  S
Sbjct: 101 PFGGRPWWLRPPFHRPTTS 119


>Z81291-1|CAB03592.1|  209|Anopheles gambiae GSTD1-5 protein
           protein.
          Length = 209

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 63  LQQAFADALYVSMYSVLPGNSENQ 134
           L Q FAD  Y  +++  P N EN+
Sbjct: 104 LYQRFADYYYPQIFAKQPANPENE 127


>AF071160-3|AAC79993.1|  209|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 209

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 63  LQQAFADALYVSMYSVLPGNSENQ 134
           L Q FAD  Y  +++  P N EN+
Sbjct: 104 LYQRFADYYYPQIFAKQPANPENE 127


>Z81292-1|CAB03593.1|  209|Anopheles gambiae GSTD1-6 protein
           protein.
          Length = 209

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 63  LQQAFADALYVSMYSVLPGNSENQ 134
           L Q FAD  Y  +++  P N EN+
Sbjct: 104 LYQRFADYHYPQIFAKQPANPENE 127


>Z71481-1|CAA96105.1|  140|Anopheles gambiae GSTD2 protein protein.
          Length = 140

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 63  LQQAFADALYVSMYSVLPGNSENQ 134
           L Q FAD  Y  +++  P N EN+
Sbjct: 104 LYQRFADYHYPQIFAKQPANPENE 127


>DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.
          Length = 409

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -3

Query: 445 EQLRKQMVSVTNDILDHPCDDLDSKMTTMYQATYKKRS 332
           +QLR  ++S++ +   H C+   +   TM  A   KRS
Sbjct: 134 KQLRSPLLSISRNRYRHECNSAATTYGTMQFAQGVKRS 171


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = -3

Query: 610 PIVGKP--CEPPTPSGAPPAQRAP 545
           P++G+P    PP P G P  Q +P
Sbjct: 258 PMMGQPPPIRPPNPMGGPRPQISP 281


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = -3

Query: 592 CEPPTPSGAPPAQRAPVAPYCHCDAHSYSPRVEQYKQL 479
           C    P    P +   + PYC  D+     R+E   Q+
Sbjct: 728 CPASHPYKRFPQEAGKIGPYCSADSMQSGLRIEPQTQV 765


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +1

Query: 313  CNRLPGMISSCTWLDTSLSSSSPGRRKDDLGCH 411
            C R+ G    CT   +  S+SS G   D  G H
Sbjct: 1331 CERIAGETFECTSTSSKFSTSSRGSGSDS-GSH 1362


>AF071160-1|AAC79995.1|  209|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 209

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 63  LQQAFADALYVSMYSVLPGNSENQ 134
           L Q FAD  Y  +++  P N EN+
Sbjct: 104 LYQRFADYHYPQIFAKQPANPENE 127


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 625 WPFPKPIVGKPCEPP 581
           WP P P + +P E P
Sbjct: 639 WPLPPPYITEPVEGP 653


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 740,791
Number of Sequences: 2352
Number of extensions: 15596
Number of successful extensions: 48
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)