Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11d02
(771 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B40A4 Cluster: PREDICTED: similar to tRNA-dihyd... 298 1e-79
UniRef50_Q9VY45 Cluster: CG1434-PA; n=6; Endopterygota|Rep: CG14... 269 6e-71
UniRef50_Q9NX74 Cluster: tRNA-dihydrouridine synthase 2-like; n=... 192 6e-48
UniRef50_UPI0000E472BC Cluster: PREDICTED: similar to tRNA-dihyd... 139 8e-32
UniRef50_Q9XWJ9 Cluster: Putative uncharacterized protein; n=2; ... 97 3e-19
UniRef50_A4RU69 Cluster: Predicted protein; n=2; Ostreococcus|Re... 91 4e-17
UniRef50_Q54QJ2 Cluster: Putative uncharacterized protein; n=1; ... 76 1e-12
UniRef50_Q00RI1 Cluster: OSIGBa0125M19.5 protein; n=9; Magnoliop... 75 3e-12
UniRef50_A3AVU4 Cluster: Putative uncharacterized protein; n=1; ... 71 4e-11
UniRef50_Q6C002 Cluster: Yarrowia lipolytica chromosome F of str... 70 6e-11
UniRef50_O74731 Cluster: tRNA dihydrouridine synthase Dus2; n=1;... 60 5e-08
UniRef50_A7EHJ6 Cluster: Putative uncharacterized protein; n=2; ... 60 5e-08
UniRef50_Q4PAE4 Cluster: Putative uncharacterized protein; n=1; ... 54 4e-06
UniRef50_A2QES0 Cluster: Contig An02c0390, complete genome; n=12... 48 2e-04
UniRef50_Q5BZE9 Cluster: SJCHGC08917 protein; n=1; Schistosoma j... 47 5e-04
UniRef50_Q54ES7 Cluster: Putative uncharacterized protein; n=1; ... 47 6e-04
UniRef50_Q6BX60 Cluster: Debaryomyces hansenii chromosome B of s... 46 0.001
UniRef50_A2EF32 Cluster: Dihydrouridine synthase, putative; n=1;... 45 0.002
UniRef50_A6R3V4 Cluster: Putative uncharacterized protein; n=1; ... 42 0.017
UniRef50_O95620 Cluster: tRNA-dihydrouridine synthase 4-like; n=... 42 0.022
UniRef50_Q09504 Cluster: Uncharacterized tRNA-dihydrouridine syn... 40 0.052
UniRef50_A7RMK5 Cluster: Predicted protein; n=1; Nematostella ve... 40 0.091
UniRef50_Q8PX79 Cluster: NifR3-like protein; n=5; Archaea|Rep: N... 39 0.16
UniRef50_Q10CV6 Cluster: Helicase associated domain family prote... 38 0.21
UniRef50_UPI0000D5693C Cluster: PREDICTED: similar to dihydrouri... 38 0.28
UniRef50_Q1Q3Q8 Cluster: Strongly similar to tRNA-dihydrouridine... 38 0.28
UniRef50_A4GK15 Cluster: Ribonuclease III; n=1; uncultured marin... 38 0.28
UniRef50_Q0IV63 Cluster: Os11g0109900 protein; n=13; Magnoliophy... 38 0.28
UniRef50_Q54XQ6 Cluster: Putative uncharacterized protein; n=1; ... 38 0.28
UniRef50_UPI0000D57665 Cluster: PREDICTED: similar to SON DNA-bi... 38 0.37
UniRef50_Q8IBP1 Cluster: Putative uncharacterized protein PF07_0... 38 0.37
UniRef50_A5K1E0 Cluster: tRNA-dihydrouridine synthase, putative;... 38 0.37
UniRef50_Q8SUV4 Cluster: Putative uncharacterized protein ECU07_... 38 0.37
UniRef50_A5K3N2 Cluster: Putative uncharacterized protein; n=1; ... 37 0.48
UniRef50_A2DYY3 Cluster: Putative uncharacterized protein; n=1; ... 37 0.48
UniRef50_A2FU21 Cluster: Putative uncharacterized protein; n=1; ... 37 0.64
UniRef50_A7NUL2 Cluster: Chromosome chr18 scaffold_1, whole geno... 36 0.84
UniRef50_Q4UGK9 Cluster: Putative uncharacterized protein; n=2; ... 36 0.84
UniRef50_Q8ZAX7 Cluster: tRNA-dihydrouridine synthase B; n=214; ... 36 1.1
UniRef50_O52532 Cluster: tRNA-dihydrouridine synthase B; n=6; Ga... 36 1.1
UniRef50_Q9CLW3 Cluster: tRNA-dihydrouridine synthase B; n=17; P... 36 1.1
UniRef50_A2EN54 Cluster: Putative uncharacterized protein; n=1; ... 36 1.5
UniRef50_Q66B88 Cluster: Putative uncharacterized protein; n=1; ... 35 1.9
UniRef50_A5C7X9 Cluster: Putative uncharacterized protein; n=1; ... 35 2.6
UniRef50_Q59YG4 Cluster: Potential tRNA dihydrouridine synthase;... 35 2.6
UniRef50_O74553 Cluster: tRNA dihydrouridine synthase Dus4; n=1;... 35 2.6
UniRef50_Q06063 Cluster: tRNA-dihydrouridine synthase 4; n=10; S... 35 2.6
UniRef50_Q30WR3 Cluster: Dihydrouridine synthase family protein;... 34 3.4
UniRef50_A5D5Q0 Cluster: TRNA-dihydrouridine synthase; n=5; Firm... 34 3.4
UniRef50_Q4V397 Cluster: At4g10720; n=7; Arabidopsis thaliana|Re... 34 3.4
UniRef50_A7AQM0 Cluster: Dihydrouridine synthase, putative; n=1;... 34 3.4
UniRef50_P37567 Cluster: Probable tRNA-dihydrouridine synthase 1... 34 3.4
UniRef50_Q6G9G6 Cluster: Dihydrodipicolinate synthase; n=16; Sta... 34 3.4
UniRef50_Q31II6 Cluster: Dihydrouridine synthase; n=1; Thiomicro... 34 4.5
UniRef50_A4XH30 Cluster: Putative TIM-barrel protein, nifR3 fami... 34 4.5
UniRef50_A5BT61 Cluster: Putative uncharacterized protein; n=1; ... 34 4.5
UniRef50_A1D8W3 Cluster: RNA exonuclease, putative; n=3; Trichoc... 34 4.5
UniRef50_Q74EF7 Cluster: Dihydrouridine synthase family protein;... 33 5.9
UniRef50_Q6SFW7 Cluster: NifR3/Smm1 family protein; n=1; uncultu... 33 5.9
UniRef50_Q251N6 Cluster: Putative uncharacterized protein; n=2; ... 33 5.9
UniRef50_Q11I59 Cluster: Putative uncharacterized protein precur... 33 5.9
UniRef50_A7SFT0 Cluster: Predicted protein; n=1; Nematostella ve... 33 5.9
UniRef50_Q5KGP0 Cluster: Putative uncharacterized protein; n=3; ... 33 5.9
UniRef50_Q4FPR0 Cluster: DNA primase; n=2; Candidatus Pelagibact... 33 7.9
UniRef50_Q489F6 Cluster: NifR3/Smm1 family protein; n=2; Proteob... 33 7.9
UniRef50_Q29KM3 Cluster: GA14905-PA; n=1; Drosophila pseudoobscu... 33 7.9
UniRef50_Q16FM5 Cluster: LL5 beta protein, putative; n=2; Aedes ... 33 7.9
UniRef50_O29352 Cluster: Dihydrodipicolinate synthase; n=2; Eury... 33 7.9
>UniRef50_UPI00015B40A4 Cluster: PREDICTED: similar to
tRNA-dihydrouridine synthase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to
tRNA-dihydrouridine synthase - Nasonia vitripennis
Length = 505
Score = 298 bits (731), Expect = 1e-79
Identities = 143/262 (54%), Positives = 190/262 (72%), Gaps = 5/262 (1%)
Frame = -1
Query: 771 RPQHAVHTDIIHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCS 592
RPQH ++ I VA++ IPVIANGGSKEIEK +D+ FK+ TG SSVM+ARAAEWNCS
Sbjct: 236 RPQHPNRSEFIKRVAEHAKIPVIANGGSKEIEKRADIFKFKKETGCSSVMIARAAEWNCS 295
Query: 591 IFRKEGLLPMDTVIKDYLKLAVDYDNSPSNTKYCIQNILRDLQETPRGRQFLESQTLEQI 412
IFR+ G+LPM+ VI+ YLKLAVDYDNSPSNTKYC+QNILR+LQE+P G++FL++QTLEQI
Sbjct: 296 IFREAGMLPMEDVIRSYLKLAVDYDNSPSNTKYCVQNILRELQESPLGKRFLDTQTLEQI 355
Query: 411 CSIWDLGGYCLEKQSQFQKMGIQGRWQVCPKQLEPPQKKA----KHYNEEDLCDAIQMKV 244
C +W L YC KQ + + G GR++V P++L + +EE+ D + M+
Sbjct: 356 CEVWGLDEYCRTKQKEHRDRGFGGRFEVVPERLSLIDGNGGAGKRKLDEEE--DVLLMRC 413
Query: 243 SFIRANF-NDLNLPKSRLHAWAGKNGYSLPKYNTQHIEKLFRTIVTFNEKKYTSTFWEKN 67
+F+R N+ +D +LPKSRL W N LP Y T H +KLFR++V + +KY S+FWEK+
Sbjct: 414 AFLRNNYADDTSLPKSRLAKWTRDNRKKLPIYVTHHEDKLFRSVVQVDGRKYGSSFWEKS 473
Query: 66 KKFAEQGAALVCLHHLGIVSED 1
KK+AEQGAAL CL LG++ +
Sbjct: 474 KKWAEQGAALACLCALGVIDTE 495
>UniRef50_Q9VY45 Cluster: CG1434-PA; n=6; Endopterygota|Rep:
CG1434-PA - Drosophila melanogaster (Fruit fly)
Length = 473
Score = 269 bits (659), Expect = 6e-71
Identities = 134/261 (51%), Positives = 180/261 (68%), Gaps = 9/261 (3%)
Frame = -1
Query: 771 RPQHAVHTDIIHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCS 592
RPQH H +++ VA + IP+IANGGSK + + D+ F+ G+ SVM+ARAA+ N S
Sbjct: 203 RPQHPAHPEVLRAVAQAVDIPIIANGGSKNMHCYDDLRKFQMECGADSVMVARAAQINVS 262
Query: 591 IFRKEGLLPMDTVIKDYLKLAVDYDNSPSNTKYCIQNILRDLQETPRGRQFLESQTLEQI 412
IFR EGLLPMD +I+ YL+L VDYDN+P N KYC+Q+ILR+LQETPRG++FL+ QTL+QI
Sbjct: 263 IFRPEGLLPMDELIEKYLRLCVDYDNAPHNAKYCVQSILRELQETPRGKRFLQCQTLQQI 322
Query: 411 CSIWDLGGYCLEKQSQFQKMGIQGRWQVCPKQLEPPQKKAKHYNEEDLCDAIQ------- 253
C IW+LG YC KQ + + MG GR +V EPP+ AK ED AI
Sbjct: 323 CEIWELGDYCRRKQRELKTMGNSGRAEV-----EPPEALAKRQKLEDAAIAITDEYDGII 377
Query: 252 -MKVSFIRANF-NDLNLPKSRLHAWAGKNGYSLPKYNTQHIEKLFRTIVTFNEKKYTSTF 79
+ F+R+ + +D +LPK++L+ A K G S P Y TQ +KLFR+I T++ ++++S+F
Sbjct: 378 CRHMPFLRSTYPSDNHLPKTQLYVHAVKTGKSPPAYETQQCDKLFRSICTYDGQRFSSSF 437
Query: 78 WEKNKKFAEQGAALVCLHHLG 16
WEKNKK AEQGAALV L HLG
Sbjct: 438 WEKNKKQAEQGAALVALLHLG 458
>UniRef50_Q9NX74 Cluster: tRNA-dihydrouridine synthase 2-like; n=27;
Eumetazoa|Rep: tRNA-dihydrouridine synthase 2-like -
Homo sapiens (Human)
Length = 493
Score = 192 bits (469), Expect = 6e-48
Identities = 107/256 (41%), Positives = 154/256 (60%), Gaps = 3/256 (1%)
Frame = -1
Query: 771 RPQHAVHTDIIHYVADNISIPVIANGGSKE-IEKHSDVAIFKEMTGSSSVMLARAAEWNC 595
RPQH V ++I +AD +SIPVIANGGS + I+++SD+ F++ T +SSVM+ARAA WN
Sbjct: 190 RPQHPVSCEVIKAIADTLSIPVIANGGSHDHIQQYSDIEDFRQATAASSVMVARAAMWNP 249
Query: 594 SIFRKEGLLPMDTVIKDYLKLAVDYDNSPSNTKYCIQNILRDLQETPRGRQFLESQTLEQ 415
SIF KEGL P++ V++ Y++ AV YDN +NTKYC+ +LR+ E+P+GR +Q+ +
Sbjct: 250 SIFLKEGLRPLEEVMQKYIRYAVQYDNHYTNTKYCLCQMLREQLESPQGRLLHAAQSSRE 309
Query: 414 ICSIWDLGGYCLEKQSQFQKMGIQGRWQVCPKQLEPPQKKAKHYNEEDLCDAIQMKVSFI 235
IC + LG + E + Q R + K E + A ED I+M V F
Sbjct: 310 ICEAFGLGAFYEETTQELDAQ--QAR--LSAKTSEQTGEPA-----EDTSGVIKMAVKFD 360
Query: 234 RANFNDLNLPKSRLHAWAGKNGYSLPKYNT--QHIEKLFRTIVTFNEKKYTSTFWEKNKK 61
R + PK L W + + P Y T + +++LF +IVT E+KY ST W+K+KK
Sbjct: 361 RRAYPAQITPKMCLLEWCRREKLAQPVYETVQRPLDRLFSSIVTVAEQKYQSTLWDKSKK 420
Query: 60 FAEQGAALVCLHHLGI 13
AEQ AA+VCL G+
Sbjct: 421 LAEQAAAIVCLRSQGL 436
>UniRef50_UPI0000E472BC Cluster: PREDICTED: similar to
tRNA-dihydrouridine synthase; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to
tRNA-dihydrouridine synthase - Strongylocentrotus
purpuratus
Length = 499
Score = 139 bits (336), Expect = 8e-32
Identities = 84/239 (35%), Positives = 134/239 (56%), Gaps = 4/239 (1%)
Frame = -1
Query: 717 SIPVIANGGSKEIEK-HSDVAIFKEMTGSSSVMLARAAEWNCSIFRKEGLLPMDTVIKDY 541
+I I +GGS++I K ++D+ F+EMTG+SSVM+AR A+WN SIFRKEG LP V + Y
Sbjct: 164 TIKEIPSGGSQDIIKSYADIERFREMTGASSVMIAREAQWNPSIFRKEGKLPSHDVAQRY 223
Query: 540 LKLAVDYDNSPSNTKYCIQNILRDLQETPRGRQFLESQTLEQICSIWDLGGYCLEKQSQF 361
++ +VDYDN +N KYCIQ ILRD +T +G++ S+++++ICS + + Y
Sbjct: 224 IQYSVDYDNVYTNMKYCIQQILRDEVQTEKGQKIQHSKSVQEICSAYGMLDY-------- 275
Query: 360 QKMGIQGRWQVCPK-QLEPPQKKAKHYNEEDLCDAIQMKVSFIRANFNDLNLPKSRLHAW 184
++GR + + Q K + N+ K++ + K L +
Sbjct: 276 HDKALEGRMRSIEELQCTEMAPKRRKLNDGSYIIEAPRKINKKEMRLSKKTF-KGVLIEY 334
Query: 183 AGKNGYSLPKYNTQH-IE-KLFRTIVTFNEKKYTSTFWEKNKKFAEQGAALVCLHHLGI 13
P Y + IE ++FR+ V ++++Y +T W +KK++EQGAA VC LG+
Sbjct: 335 CHAKKLHPPHYTLEEDIENRVFRSSVIVDDQEYATTLWCTSKKYSEQGAAAVCCQQLGL 393
>UniRef50_Q9XWJ9 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 436
Score = 97.5 bits (232), Expect = 3e-19
Identities = 76/249 (30%), Positives = 122/249 (48%), Gaps = 4/249 (1%)
Frame = -1
Query: 747 DIIHYVADNI-SIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCSIFRKEGL 571
D I VA + SIPVI+NG S EIE++SD ++ +T +SS M+AR A SIFR+EG
Sbjct: 192 DEIRDVAQAVQSIPVISNGLSDEIEQYSDFEKYQLLTETSSTMIARKALSTPSIFRREGC 251
Query: 570 LPMDTVIKDYLKLAVDYDNSPSNTKYCIQNIL-RDLQETPRGRQFLESQTLEQICSIWDL 394
L I+++L+LA YD S + TKY +Q IL D + PRG+ + + ++ QIC
Sbjct: 252 LDKYEDIRNFLELACQYDESYTMTKYVVQRILGADQEYDPRGKATVAAGSVLQIC----- 306
Query: 393 GGYCLEKQSQFQKMGIQGRWQVCPKQLEPPQKKAKHYNEEDLCD-AIQMKVSFIRANFND 217
F + +W+ ++ + KK +++ + + + + ++ +
Sbjct: 307 --------KAFGMEDVYDKWR--DERKKKQSKKRARVDDDGVYNIEVSFPLKRLKNSVGF 356
Query: 216 LNLPKSRLHAWAGKNGYSLPKYN-TQHIEKLFRTIVTFNEKKYTSTFWEKNKKFAEQGAA 40
PK LH + + Y + +K F +KKY S + N + AEQ AA
Sbjct: 357 SPTPKMVLHDYCVETKIPKATYEVVKRDDKRFVATACIGDKKYRSGIGQPNLRMAEQVAA 416
Query: 39 LVCLHHLGI 13
L LH + I
Sbjct: 417 LAALHGMNI 425
>UniRef50_A4RU69 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 345
Score = 90.6 bits (215), Expect = 4e-17
Identities = 46/145 (31%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Frame = -1
Query: 771 RPQHAVHTDIIHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCS 592
RP+ H ++I V + + PVIANG ++E + D A + TG++S M AR A+WN S
Sbjct: 193 RPREPAHWNLIKNVVEAVDCPVIANG---DVECYEDFARIRAQTGAASAMCARGAQWNLS 249
Query: 591 IFRKEGLLPMDTVIKDYLKLAVDYDNSPSNTKYCIQNIL--RDLQETPRGRQFLESQTLE 418
IFR EG+LP+D V K +++ A++YDN + TK+ ++ IL + G+ + +T +
Sbjct: 250 IFRPEGMLPIDVVKKHFVQRAIEYDNPWNFTKFQLREILVHNKRMASDEGQCLNKCKTWD 309
Query: 417 QICSIWDLGGYCLEKQSQFQKMGIQ 343
++ ++ L E + + ++ ++
Sbjct: 310 ELAELYSLEDVLKESREKRRRAALR 334
>UniRef50_Q54QJ2 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 402
Score = 75.8 bits (178), Expect = 1e-12
Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 8/140 (5%)
Frame = -1
Query: 771 RPQHAVHTDIIHYVADN--ISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWN 598
RP+ H D + + N S+P+IANG +I +H+D+ K+ T S+M+AR N
Sbjct: 210 RPRDPAHWDRLENILSNASFSVPIIANG---DIFEHADIEKIKKQTKVDSIMIARGVVKN 266
Query: 597 CSIFRKEGLLPMDTVIKDYLKLAVDYDNSPSNTKYCIQNILRD--LQETPRGRQFLESQT 424
SIF K + + +I++Y ++A +NSP NTKY I ++L + + + ++
Sbjct: 267 VSIFSKPSPIDLKQIIQEYTEIAYQTNNSPVNTKYVINSMLNENNITTNKEAKAMSSARD 326
Query: 423 LEQICSIWDLGG----YCLE 376
+ I IW + +CLE
Sbjct: 327 YDTITKIWGINDKFKQFCLE 346
>UniRef50_Q00RI1 Cluster: OSIGBa0125M19.5 protein; n=9;
Magnoliophyta|Rep: OSIGBa0125M19.5 protein - Oryza
sativa (Rice)
Length = 319
Score = 74.5 bits (175), Expect = 3e-12
Identities = 41/126 (32%), Positives = 70/126 (55%), Gaps = 2/126 (1%)
Frame = -1
Query: 771 RPQHAVHTDIIHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCS 592
RP+ D I V +SIPVIANG ++ ++ D K+ TG++SVM+AR A WN S
Sbjct: 184 RPRDPAKWDEIADVVSALSIPVIANG---DVFEYEDFKRIKDATGAASVMVARGAMWNAS 240
Query: 591 IFRKEGLLPMDTVIKDYLKLAVDYDNSPSNTKYCIQNILRDLQ--ETPRGRQFLESQTLE 418
IF +G P + V ++Y++ ++ +DN +TK I+ ++ E P G+ + T+
Sbjct: 241 IFCPKGKTPWEDVKREYVRKSILWDNDLKSTKQTIKEMIMHYSCLEFPEGKGVNKCDTIA 300
Query: 417 QICSIW 400
+ ++
Sbjct: 301 DLAKLY 306
>UniRef50_A3AVU4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 190
Score = 70.5 bits (165), Expect = 4e-11
Identities = 37/113 (32%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Frame = -1
Query: 732 VADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCSIFRKEGLLPMDTV 553
V +SIPVIANG ++ ++ D K+ TG++SVM+AR A WN SIF +G P + V
Sbjct: 68 VVSALSIPVIANG---DVFEYEDFKRIKDATGAASVMVARGAMWNASIFCPKGKTPWEDV 124
Query: 552 IKDYLKLAVDYDNSPSNTKYCIQNILRDLQ--ETPRGRQFLESQTLEQICSIW 400
++Y++ ++ +DN +TK I+ ++ E P G+ + T+ + ++
Sbjct: 125 KREYVRKSILWDNDLKSTKQTIKEMIMHYSCLEFPEGKGVNKCDTIADLAKLY 177
>UniRef50_Q6C002 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 394
Score = 70.1 bits (164), Expect = 6e-11
Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Frame = -1
Query: 771 RPQHAVHTDIIHYVAD---NISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEW 601
RP+ V D + VA+ I + NG ++E ++A +E G M+ARAAE
Sbjct: 196 RPREPVIRDTLAKVAEVCHKHGITCLVNG---DVEGRHELADLQEKYGIDGAMIARAAEA 252
Query: 600 NCSIFRKEGLLPMDTVIKDYLKLAVDYDNSPSNTKYCIQNIL 475
N S FR EG+LP V K+YL + +YDN NTKYC+ ++
Sbjct: 253 NASCFRAEGMLPWQQVTKEYLDICREYDNFYQNTKYCLTRMI 294
>UniRef50_O74731 Cluster: tRNA dihydrouridine synthase Dus2; n=1;
Schizosaccharomyces pombe|Rep: tRNA dihydrouridine
synthase Dus2 - Schizosaccharomyces pombe (Fission
yeast)
Length = 479
Score = 60.5 bits (140), Expect = 5e-08
Identities = 32/87 (36%), Positives = 51/87 (58%)
Frame = -1
Query: 732 VADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCSIFRKEGLLPMDTV 553
V N + ++ NG ++ ++D E G V++ARAAE N S FR EG L V
Sbjct: 210 VCRNKDVSILVNG---DVLSYNDGLDVIEKYGVDGVLIARAAERNVSCFRIEGPLSSFKV 266
Query: 552 IKDYLKLAVDYDNSPSNTKYCIQNILR 472
+++LK+A++ DN+ NTKYC+ I++
Sbjct: 267 AEEFLKMALEVDNNFGNTKYCLNQIMQ 293
>UniRef50_A7EHJ6 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Sclerotinia sclerotiorum 1980
Length = 513
Score = 60.5 bits (140), Expect = 5e-08
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 5/166 (3%)
Frame = -1
Query: 771 RPQHAVHTDIIHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCS 592
RP+ + +AD IA + ++E E G++ M+A AAE N S
Sbjct: 301 RPRERAIRGQLKMIADICRESGIACLMNGDVENRDQALKLAEEYGTNGAMIAVAAEANSS 360
Query: 591 IFRKE---GLLPMDTVIKDYLKLAVDYDNSPSNTKYCIQNILRDLQETPRGRQFLESQTL 421
FR E GL P + V+ Y+K ++D +N NTKY + +++ ++P R +S+
Sbjct: 361 CFRSEADGGLAPWEEVVLQYMKFSLDMENRFGNTKYLLNHLIPG--KSPIYRAIQQSKNY 418
Query: 420 EQICSIWDLGGYCLEKQS--QFQKMGIQGRWQVCPKQLEPPQKKAK 289
+Q+C LG L +Q+ +K+GI + QV +L+ Q KA+
Sbjct: 419 QQLCD--HLGHKSLLEQAIDVDEKIGISDK-QVEEHKLKQAQAKAE 461
>UniRef50_Q4PAE4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 766
Score = 54.0 bits (124), Expect = 4e-06
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = -1
Query: 717 SIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCSIFRKEGLLPMDTVIKD-Y 541
+IPV+ NG ++ + V KE+TG +S M+AR AE N S FR +G + + VI +
Sbjct: 285 TIPVVCNG---DVWDAATVPRIKELTGVTSTMIARGAEANPSCFRPQGNVSIPQVIAPKW 341
Query: 540 LKLAVDYDNSPSNTKYCIQNI 478
+K ++ +N NTKYC+ +
Sbjct: 342 VKYSIALNNPVGNTKYCMAQL 362
>UniRef50_A2QES0 Cluster: Contig An02c0390, complete genome; n=12;
Pezizomycotina|Rep: Contig An02c0390, complete genome -
Aspergillus niger
Length = 446
Score = 48.4 bits (110), Expect = 2e-04
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Frame = -1
Query: 771 RPQHAVHTDIIHYVAD---NISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEW 601
RP+ D + +AD + + NG K A+ KE G M+A AAE
Sbjct: 215 RPRERAIRDQVRMIADICHEAGVACVINGDVTS--KDEGHALMKEF-GVDGAMIATAAEA 271
Query: 600 NCSIFRKE---GLLPMDTVIKDYLKLAVDYDNSPSNTKYCIQNIL 475
N S FR E GLLP V+ +Y+K ++ +N N+KY + NIL
Sbjct: 272 NPSCFRTEAEGGLLPWKEVVHEYIKFCLESENRFGNSKYLL-NIL 315
>UniRef50_Q5BZE9 Cluster: SJCHGC08917 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08917 protein - Schistosoma
japonicum (Blood fluke)
Length = 256
Score = 47.2 bits (107), Expect = 5e-04
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = -1
Query: 564 MDTVIKDYLKLAVDYDNSPSNTKYCIQNILRDLQETPRGRQFLESQTLEQICSIWDL 394
++ +I YL LAV YD+ + KYC+ +L D TP L + L +C+IW++
Sbjct: 12 LEEIICRYLTLAVRYDHHIAGAKYCVLRMLHDFGGTPLYEDALAANELRDLCAIWNM 68
Score = 40.7 bits (91), Expect = 0.039
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = -1
Query: 159 PKYNT-QHIEKL-FRTIVTFNEKKYTSTFWEKNKKFAEQGAALVCLHHLGI 13
PKY T ++ EK F + V + ++Y +T K KK+AEQ AALVCL LG+
Sbjct: 193 PKYETVENREKRSFFSAVLVDGRRYRNTSSCKTKKYAEQAAALVCLQVLGL 243
>UniRef50_Q54ES7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 344
Score = 46.8 bits (106), Expect = 6e-04
Identities = 26/84 (30%), Positives = 46/84 (54%)
Frame = -1
Query: 771 RPQHAVHTDIIHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCS 592
+ H V D I V DN+++PV ANG + + +++ +E TG + VM AR N +
Sbjct: 218 KSSHPVDYDAIKLVKDNVTLPVFANGDVFTLSQSNEI---REKTGVNGVMSARGLLTNPA 274
Query: 591 IFRKEGLLPMDTVIKDYLKLAVDY 520
+F+ P++ IKD++ + +Y
Sbjct: 275 LFQGYDKTPIE-CIKDFINIYSEY 297
>UniRef50_Q6BX60 Cluster: Debaryomyces hansenii chromosome B of
strain CBS767 of Debaryomyces hansenii; n=1;
Debaryomyces hansenii|Rep: Debaryomyces hansenii
chromosome B of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 374
Score = 45.6 bits (103), Expect = 0.001
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = -1
Query: 747 DIIHYVADNISIPVIANGGSKEI-EKHSDVAIFKEMTGSSSVMLARAAEWNCSIFRKEGL 571
D +H A+N+S I NG + E H + E G M+A +AE N ++F E
Sbjct: 206 DTVH--ANNVSF--IINGSIRSRREFHLLQRKYGEKVGG---MIAESAESNPTVFA-ETP 257
Query: 570 LPMDTVIKDYLKLAVDYDNSPSNTKYCIQN 481
LP + V+ +++K+A D DN P NTKY + N
Sbjct: 258 LPWNQVVPEFIKIAQDMDNYPGNTKYIMLN 287
>UniRef50_A2EF32 Cluster: Dihydrouridine synthase, putative; n=1;
Trichomonas vaginalis G3|Rep: Dihydrouridine synthase,
putative - Trichomonas vaginalis G3
Length = 318
Score = 45.2 bits (102), Expect = 0.002
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Frame = -1
Query: 765 QHAVHTDIIHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCSIF 586
Q V+ +II ++ ++IPV+ANGG +E D F E TG++ V +A+A + + F
Sbjct: 194 QADVYNEIIKHIVQAVNIPVVANGGINTVE---DAHKFMEETGAAGVSVAQALLKDPTAF 250
Query: 585 RKEGLLPMDTVIKDYLKLA----VDYDNSPSNTKYCIQNILRDLQETPRGRQFLESQTLE 418
G P +YL L+ V + + + +R+ +E +Q +S T+E
Sbjct: 251 DPTGKKPRKDYALEYLNLSKEKGVRFFGPKKHIFIFYEKEIRENKEL--AKQIEQSTTIE 308
Query: 417 QI 412
Q+
Sbjct: 309 QL 310
>UniRef50_A6R3V4 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 461
Score = 41.9 bits (94), Expect = 0.017
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Frame = -1
Query: 714 IPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCSIFRKEG---LLPMDTVIKD 544
+ ++ NG E H +A+ E G M+A AE N S FR LLP +++D
Sbjct: 220 VAILVNG-DVESRDHG-LALMAEY-GVDGAMIATCAEANSSCFRSAADGSLLPWRAIVRD 276
Query: 543 YLKLAVDYDNSPSNTKYCIQNIL 475
Y+ L + +N NTKY + ++
Sbjct: 277 YMDLCLQCENKWGNTKYLLNMLI 299
>UniRef50_O95620 Cluster: tRNA-dihydrouridine synthase 4-like; n=28;
Eumetazoa|Rep: tRNA-dihydrouridine synthase 4-like -
Homo sapiens (Human)
Length = 317
Score = 41.5 bits (93), Expect = 0.022
Identities = 26/78 (33%), Positives = 45/78 (57%)
Frame = -1
Query: 756 VHTDIIHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCSIFRKE 577
VH D I + +N+SIPVIANG + +++ +V +TG+ VM+AR N ++F
Sbjct: 197 VHYDSIKIIKENMSIPVIANGDIRSLKEAENV---WRITGTDGVMVARGLLANPAMFAGY 253
Query: 576 GLLPMDTVIKDYLKLAVD 523
P+ I D++ +A++
Sbjct: 254 EETPL-KCIWDWVDIALE 270
>UniRef50_Q09504 Cluster: Uncharacterized tRNA-dihydrouridine
synthase-like protein C45G9.2; n=2; Caenorhabditis|Rep:
Uncharacterized tRNA-dihydrouridine synthase-like
protein C45G9.2 - Caenorhabditis elegans
Length = 284
Score = 40.3 bits (90), Expect = 0.052
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 2/113 (1%)
Frame = -1
Query: 765 QHAVHTDI--IHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCS 592
Q A DI + V D++S+P+IANGG I + E TG +M A N +
Sbjct: 159 QRAEPIDIQALRIVKDSVSVPIIANGG---ITTREEALFLAEQTGVDGIMAANGLLDNPA 215
Query: 591 IFRKEGLLPMDTVIKDYLKLAVDYDNSPSNTKYCIQNILRDLQETPRGRQFLE 433
+F P D V +++++L+ +Y +Q +LR + + R F E
Sbjct: 216 LFAGHEHTPSDCV-ENFMRLSREYGLDWLLYHQHLQYMLRPVFSAQQRRVFNE 267
>UniRef50_A7RMK5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 880
Score = 39.5 bits (88), Expect = 0.091
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = -1
Query: 204 KSRLHAWAGKNGYSLPKYNTQHIEKLFRTIVTFNEKKYTSTFWEKNKKFAEQGAA 40
KS+L+ + K ++P+Y TQ + + + +N+K Y ST KNKK AEQ A
Sbjct: 689 KSQLNEFCQKFHLAIPQYRTQREARGYVCTMLYNKKVYHSTVPLKNKKAAEQNVA 743
>UniRef50_Q8PX79 Cluster: NifR3-like protein; n=5; Archaea|Rep:
NifR3-like protein - Methanosarcina mazei
(Methanosarcina frisia)
Length = 323
Score = 38.7 bits (86), Expect = 0.16
Identities = 23/54 (42%), Positives = 34/54 (62%)
Frame = -1
Query: 741 IHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCSIFRK 580
I V + +SIPVIANG K+ E+ ++ + E+TG +M+ RAA N IF+K
Sbjct: 190 IRAVKNELSIPVIANGDVKD-EESAERTL--ELTGCDGLMIGRAAMGNPFIFKK 240
>UniRef50_Q10CV6 Cluster: Helicase associated domain family protein,
expressed; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Helicase associated domain family
protein, expressed - Oryza sativa subsp. japonica (Rice)
Length = 1138
Score = 38.3 bits (85), Expect = 0.21
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = -1
Query: 207 PKSRLHAWAGKNGYSLPKYNTQHIE-KLFRTIVTFNEKKYTSTFWEKNKKFAEQGAALVC 31
PKS L + G++ PKY T+H++ FR IV F ++ ++NK+ AE+ AA+
Sbjct: 1036 PKSLLQTLLMRAGHTPPKYKTKHLKTNEFRAIVEFKGMQFAGK-PKRNKQLAERDAAIEA 1094
Query: 30 L 28
L
Sbjct: 1095 L 1095
>UniRef50_UPI0000D5693C Cluster: PREDICTED: similar to
dihydrouridine synthase 4-like; n=3; Coelomata|Rep:
PREDICTED: similar to dihydrouridine synthase 4-like -
Tribolium castaneum
Length = 451
Score = 37.9 bits (84), Expect = 0.28
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = -1
Query: 756 VHTDIIHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCSIFRKE 577
V+ + ++ + ++++PV+ANGG K +E D +E T VM+A N ++F +
Sbjct: 193 VNKEALNLIVGSVNVPVVANGGVKSLE---DCLELQEKTNCKGVMVANGLLTNPTLFTES 249
Query: 576 GLLPMDTV 553
+ D +
Sbjct: 250 SVTTTDCI 257
>UniRef50_Q1Q3Q8 Cluster: Strongly similar to tRNA-dihydrouridine
synthase; n=1; Candidatus Kuenenia stuttgartiensis|Rep:
Strongly similar to tRNA-dihydrouridine synthase -
Candidatus Kuenenia stuttgartiensis
Length = 341
Score = 37.9 bits (84), Expect = 0.28
Identities = 23/59 (38%), Positives = 32/59 (54%)
Frame = -1
Query: 759 AVHTDIIHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCSIFR 583
A D I V ++ IPVIANG ++ +D+A K+ T VM+ RAA + IFR
Sbjct: 203 AADWDAIAEVKQSVKIPVIANG---DVRSVADIAEIKKRTACDGVMIGRAAIGHPWIFR 258
>UniRef50_A4GK15 Cluster: Ribonuclease III; n=1; uncultured marine
bacterium HF130_81H07|Rep: Ribonuclease III - uncultured
marine bacterium HF130_81H07
Length = 220
Score = 37.9 bits (84), Expect = 0.28
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = -1
Query: 219 DLNLPKSRLHAWAGKNGYSLPKYNT-QHIEKLFRTIVTFNEKKYTSTFWEKNKKFAEQGA 43
+L K+ L + KN +SLP YN + E ++ IVT +S + K+ K AEQ A
Sbjct: 148 NLKNSKTLLQEYCQKNKFSLPTYNQIEKKENIYPFIVTCKLDDSSSEGFGKSLKLAEQDA 207
Query: 42 ALVCLHHLGIVSE 4
A L +G+ E
Sbjct: 208 AARLLKKIGVKDE 220
>UniRef50_Q0IV63 Cluster: Os11g0109900 protein; n=13;
Magnoliophyta|Rep: Os11g0109900 protein - Oryza sativa
subsp. japonica (Rice)
Length = 473
Score = 37.9 bits (84), Expect = 0.28
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = -1
Query: 204 KSRLHAWAGKNGYSLPKYNT-----QHIEKLFRTIVTFNEKKYTSTFWEKNKKFAEQGAA 40
KSRL +A K G P+Y+T H E +F++ V N Y S N+K AEQ AA
Sbjct: 35 KSRLQEYAQKAGLQTPEYHTFKEGPSH-EPVFKSTVVINNTSYDSLPGFFNRKAAEQSAA 93
Query: 39 LVCL 28
V L
Sbjct: 94 EVAL 97
>UniRef50_Q54XQ6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 435
Score = 37.9 bits (84), Expect = 0.28
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = -1
Query: 741 IHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCSIFRKEGL-LP 565
I + + +SIPVIANG + ++ D+ E TG+ VM A N S F GL +P
Sbjct: 227 IRTIREQLSIPVIANG---SVVQYEDIDRCLEETGADGVMSAEGILANPSFF--SGLKVP 281
Query: 564 MDTVIKDYLKLAVDYDNSPSNTKYCIQNILRD 469
+ V ++Y+ Y S T+ I +L++
Sbjct: 282 IYQVAREYIDFTEIYKTSIHVTRSHIFKMLKE 313
>UniRef50_UPI0000D57665 Cluster: PREDICTED: similar to SON
DNA-binding protein isoform A; n=1; Tribolium
castaneum|Rep: PREDICTED: similar to SON DNA-binding
protein isoform A - Tribolium castaneum
Length = 626
Score = 37.5 bits (83), Expect = 0.37
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Frame = -1
Query: 207 PKSRLHAWAGKNGYSLPKYNT------QHIEKLFRTIVTFNEKKYTSTFWEKNKKFAEQG 46
P S L +A K P+Y+ H +K F VT N +Y NKK A+
Sbjct: 555 PVSLLGEYASKKKLGAPQYDLCFECGPDH-KKNFLFKVTLNGVEYKPNVASPNKKEAKAA 613
Query: 45 AALVCLHHLGIV 10
AA VCL HLG++
Sbjct: 614 AASVCLQHLGLI 625
>UniRef50_Q8IBP1 Cluster: Putative uncharacterized protein
PF07_0086; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PF07_0086 - Plasmodium
falciparum (isolate 3D7)
Length = 3429
Score = 37.5 bits (83), Expect = 0.37
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = -1
Query: 303 QKKAKHYNEEDLCDAIQMKVSFIRANFNDLNLPKSRLHAWAGKNGYSLPKYNTQHIEKLF 124
+KK H + + Q K F+ N + LN LHA KN Y L KYNT ++
Sbjct: 240 EKKKSHTPFDFYQEERQNKAYFL--NIHTLNFEAHMLHALLKKNKYRLTKYNTNMNNMIY 297
Query: 123 RTIVTFNEKK 94
+ + + +KK
Sbjct: 298 KYLYLYKKKK 307
>UniRef50_A5K1E0 Cluster: tRNA-dihydrouridine synthase, putative;
n=5; Plasmodium|Rep: tRNA-dihydrouridine synthase,
putative - Plasmodium vivax
Length = 340
Score = 37.5 bits (83), Expect = 0.37
Identities = 26/85 (30%), Positives = 42/85 (49%)
Frame = -1
Query: 747 DIIHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCSIFRKEGLL 568
+II + + ++IP+IANG IE D+ T + +VM A F + +
Sbjct: 200 EIIKIIKERLNIPIIANG---SIEHFEDIQKCLNYTKADAVMCAEILLEKPYFFSNQNVH 256
Query: 567 PMDTVIKDYLKLAVDYDNSPSNTKY 493
+D V+ +Y L + Y+ SNTKY
Sbjct: 257 TVD-VVNEYYDLFLQYE---SNTKY 277
>UniRef50_Q8SUV4 Cluster: Putative uncharacterized protein
ECU07_1610; n=1; Encephalitozoon cuniculi|Rep: Putative
uncharacterized protein ECU07_1610 - Encephalitozoon
cuniculi
Length = 341
Score = 37.5 bits (83), Expect = 0.37
Identities = 25/77 (32%), Positives = 39/77 (50%)
Frame = -1
Query: 741 IHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCSIFRKEGLLPM 562
I + +N+ IPV++NG I H DV E TG VM+ A N IF E +
Sbjct: 188 IRAIKENLRIPVLSNG---NIMTHHDVWRCLEYTGCDGVMVGEAHLHNPLIFTGEDRSCL 244
Query: 561 DTVIKDYLKLAVDYDNS 511
+ +I +YL + +++ S
Sbjct: 245 E-IIGEYLDICMEFPGS 260
>UniRef50_A5K3N2 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 3063
Score = 37.1 bits (82), Expect = 0.48
Identities = 25/87 (28%), Positives = 43/87 (49%)
Frame = -2
Query: 377 KNNHSSKRWGFKEGGKSVLNN*NLHKKRQNIIMKKICVMQYK*KYPLFEQISMT*IYLKA 198
K N K G EGG+ + HK QN ++ IC ++ K Y ++I M I +K+
Sbjct: 2049 KGNGKKKNHGEMEGGEKGTPQGDQHKTGQNKLL-HICAIENKKIYIYEKEIKMKNIKMKS 2107
Query: 197 DFMLGLERMGTVCQSITLNILRNCFVQ 117
F+ L ++ +C + + RNC ++
Sbjct: 2108 FFIFILNQLMKLCFDERIEV-RNCSIK 2133
>UniRef50_A2DYY3 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 313
Score = 37.1 bits (82), Expect = 0.48
Identities = 26/94 (27%), Positives = 46/94 (48%)
Frame = -1
Query: 732 VADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCSIFRKEGLLPMDTV 553
+ DNI+ I NGG I +D A + TG S+M+A AA N S+F + + +
Sbjct: 201 IFDNINCAKIGNGG---ICNKADAAEMRVKTGCDSIMIATAALKNPSVFSNTPVHAAEVL 257
Query: 552 IKDYLKLAVDYDNSPSNTKYCIQNILRDLQETPR 451
K Y ++ + + ++ I+NI+ ++ R
Sbjct: 258 NKVY-QIGTSHGEKYVDAEFNIKNIITGTKDPVR 290
>UniRef50_A2FU21 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 322
Score = 36.7 bits (81), Expect = 0.64
Identities = 23/79 (29%), Positives = 42/79 (53%)
Frame = -1
Query: 756 VHTDIIHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCSIFRKE 577
V + I +A+++SIPV+ANGG + K + +FKE + ++ VM+ + N F
Sbjct: 193 VDAEAIRKIAESVSIPVMANGGVR--TKEEAIEMFKE-SHAAGVMVGQGLLMNPKAFSDT 249
Query: 576 GLLPMDTVIKDYLKLAVDY 520
+ ++YL+L +Y
Sbjct: 250 PEHDPVAISREYLQLWKEY 268
>UniRef50_A7NUL2 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 394
Score = 36.3 bits (80), Expect = 0.84
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = -1
Query: 204 KSRLHAWAGKNGYSLPKYNT-----QHIEKLFRTIVTFNEKKYTSTFWEKNKKFAEQGAA 40
KSRL +A K G P Y+T H+ F++ V N+ +Y S N+K AEQ AA
Sbjct: 11 KSRLQEYAQKVGLPTPLYDTIKEGPPHVPS-FKSTVIVNDVRYDSLPGFSNRKAAEQSAA 69
Query: 39 LVCLHHL 19
V L L
Sbjct: 70 EVALVEL 76
>UniRef50_Q4UGK9 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 359
Score = 36.3 bits (80), Expect = 0.84
Identities = 28/88 (31%), Positives = 43/88 (48%)
Frame = -1
Query: 747 DIIHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCSIFRKEGLL 568
D I + ++IPVIANGG IE DV + TG+ +VM + A N +F +
Sbjct: 189 DSIKIIKSRVNIPVIANGG---IETFEDVKRCLDYTGADAVMSSEAILENPYLFSGKMYN 245
Query: 567 PMDTVIKDYLKLAVDYDNSPSNTKYCIQ 484
+D + ++YL + SP CI+
Sbjct: 246 NID-IFEEYLSI---LKGSPRQKISCIK 269
>UniRef50_Q8ZAX7 Cluster: tRNA-dihydrouridine synthase B; n=214;
Proteobacteria|Rep: tRNA-dihydrouridine synthase B -
Yersinia pestis
Length = 321
Score = 35.9 bits (79), Expect = 1.1
Identities = 22/56 (39%), Positives = 31/56 (55%)
Frame = -1
Query: 747 DIIHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCSIFRK 580
D I V +SIPVIANG + K V + TG+ ++M+ RAA+ IFR+
Sbjct: 184 DSIRAVKQTVSIPVIANGDITDPHKARAVL---DYTGADALMIGRAAQGRPWIFRE 236
>UniRef50_O52532 Cluster: tRNA-dihydrouridine synthase B; n=6;
Gammaproteobacteria|Rep: tRNA-dihydrouridine synthase B
- Serratia marcescens
Length = 334
Score = 35.9 bits (79), Expect = 1.1
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = -1
Query: 747 DIIHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCSIFRK 580
D I V ++SIP+IANG + K V + TG+ ++M+ RAA+ IFR+
Sbjct: 184 DSIRAVKQSVSIPIIANGDITDPHKARAVL---DYTGADALMIGRAAQGRPWIFRE 236
>UniRef50_Q9CLW3 Cluster: tRNA-dihydrouridine synthase B; n=17;
Pasteurellaceae|Rep: tRNA-dihydrouridine synthase B -
Pasteurella multocida
Length = 332
Score = 35.9 bits (79), Expect = 1.1
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = -1
Query: 747 DIIHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCSIFR-KEGL 571
D I V + +SIP+IANG EK V + T + ++M+ R + N +FR E L
Sbjct: 184 DNIKAVKEQLSIPIIANGDITSAEKAKYVL---DYTNADAIMIGRGSLGNPWLFRVMESL 240
Query: 570 LPMDTVI 550
+ D+++
Sbjct: 241 IEKDSIV 247
>UniRef50_A2EN54 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 321
Score = 35.5 bits (78), Expect = 1.5
Identities = 21/79 (26%), Positives = 38/79 (48%)
Frame = -1
Query: 756 VHTDIIHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCSIFRKE 577
++ +++ V +SIPVI NGG ++ D TG+ + M A++ + ++F K
Sbjct: 190 LNKELVKAVVQAVSIPVIVNGGINSLD---DARNMIRETGAIAAMSAQSLLMDPTLFDKN 246
Query: 576 GLLPMDTVIKDYLKLAVDY 520
G P +YL + Y
Sbjct: 247 GRQPNTVFALEYLDIFEKY 265
>UniRef50_Q66B88 Cluster: Putative uncharacterized protein; n=1;
Yersinia pseudotuberculosis|Rep: Putative
uncharacterized protein - Yersinia pseudotuberculosis
Length = 241
Score = 35.1 bits (77), Expect = 1.9
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = -1
Query: 315 LEPPQKKAKHYNEEDLCDAIQMKVSFIRANFNDLNLPKSRLHA---WAGKNGYS 163
+ PP++K N + LC + + + F + FND + + + W GKNGYS
Sbjct: 137 IRPPERKKFITNIKSLCSSSTLMLVFEKIIFNDAEINMKYIDSYLKWKGKNGYS 190
>UniRef50_A5C7X9 Cluster: Putative uncharacterized protein; n=1; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 1180
Score = 34.7 bits (76), Expect = 2.6
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -1
Query: 204 KSRLHAWAGKNGYSLPKYNTQHIE-KLFRTIVTFNEKKYTSTFWEKNKKFAEQGAALVCL 28
KS+L + GY+ P Y T+ ++ FR+ V FN + NKKFAE+ AA L
Sbjct: 1093 KSQLQTLLTRAGYAAPTYKTKQLKNNQFRSTVEFNGMQIMGQPC-NNKKFAEKDAAAEAL 1151
Query: 27 HHL 19
L
Sbjct: 1152 QLL 1154
>UniRef50_Q59YG4 Cluster: Potential tRNA dihydrouridine synthase;
n=2; Saccharomycetales|Rep: Potential tRNA
dihydrouridine synthase - Candida albicans (Yeast)
Length = 433
Score = 34.7 bits (76), Expect = 2.6
Identities = 33/174 (18%), Positives = 76/174 (43%), Gaps = 2/174 (1%)
Frame = -1
Query: 732 VADNISIPVIANGGSKEIE--KHSDVAIFKEMTGSSSVMLARAAEWNCSIFRKEGLLPMD 559
+ + ++ NG + + K+ A+ G S+M+A AAE N S+F P
Sbjct: 210 IIQTAGVNLVINGNMQNVADLKNLQSALNDNGGGKLSIMIAEAAEANPSVF-SHSPKPQC 268
Query: 558 TVIKDYLKLAVDYDNSPSNTKYCIQNILRDLQETPRGRQFLESQTLEQICSIWDLGGYCL 379
+I++ ++ Y + S TK+ + N++ ++ ++ ++++ +Q+ I
Sbjct: 269 LIIQELFEICQKYYQNFSATKFLMLNMIP--SKSKYFQKLSQTKSFDQMGVILKEISQEY 326
Query: 378 EKQSQFQKMGIQGRWQVCPKQLEPPQKKAKHYNEEDLCDAIQMKVSFIRANFND 217
EKQ Q G+ + + + + KA +N + I + ++ F++
Sbjct: 327 EKQKQMSTKGLDKIFTIMNRDCQ----KANFFNLDQFQKHIAQRGEYMTKFFHE 376
>UniRef50_O74553 Cluster: tRNA dihydrouridine synthase Dus4; n=1;
Schizosaccharomyces pombe|Rep: tRNA dihydrouridine
synthase Dus4 - Schizosaccharomyces pombe (Fission
yeast)
Length = 326
Score = 34.7 bits (76), Expect = 2.6
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = -1
Query: 771 RPQHAVHTDIIHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCS 592
R V+ D I V + IPV+ANG K + K ++A + E G +M AR N +
Sbjct: 184 RSSFPVNLDAIREVRPCVQIPVVANGDVKSLRKGLEIAKYTETQG---IMSARGLLENPA 240
Query: 591 IF 586
+F
Sbjct: 241 LF 242
>UniRef50_Q06063 Cluster: tRNA-dihydrouridine synthase 4; n=10;
Saccharomycetales|Rep: tRNA-dihydrouridine synthase 4 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 367
Score = 34.7 bits (76), Expect = 2.6
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Frame = -1
Query: 771 RPQHAVHTDIIHYVADNIS---IPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEW 601
R + D I Y+ +NIS +PVIANG + K SD+ + TG+ VM R
Sbjct: 204 RSSQPANLDAIKYIIENISDKNVPVIANG---DCFKLSDLERITKYTGAHGVMAVRGLLS 260
Query: 600 NCSIFRKEGLLPMDTVIKDYLKLAVDYDNSP 508
N ++F P + K + A+++ P
Sbjct: 261 NPALFAGYTTCPWGCIEK-FCYWALEFGGLP 290
>UniRef50_Q30WR3 Cluster: Dihydrouridine synthase family protein;
n=3; Desulfovibrio|Rep: Dihydrouridine synthase family
protein - Desulfovibrio desulfuricans (strain G20)
Length = 376
Score = 34.3 bits (75), Expect = 3.4
Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = -1
Query: 771 RPQHAVHTDIIHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCS 592
R H T I V D + IPVI NG ++ +D A E TG V L R A
Sbjct: 225 RRTHRPRTAHIGLVKDAVDIPVIGNG---DVFDAADCAAMLERTGCDGVSLGRLAIARPW 281
Query: 591 IFRK--EGLLPMDTVIKDYLKLAVD 523
IF + G +P +D L +D
Sbjct: 282 IFAQWTRGFVPEKQTYRDTLFALMD 306
>UniRef50_A5D5Q0 Cluster: TRNA-dihydrouridine synthase; n=5;
Firmicutes|Rep: TRNA-dihydrouridine synthase -
Pelotomaculum thermopropionicum SI
Length = 324
Score = 34.3 bits (75), Expect = 3.4
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = -1
Query: 747 DIIHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCSIFRK 580
+II V + +PVI NG ++ D E TG VM+ RAA N IFR+
Sbjct: 184 EIIAAVKRAVDVPVIGNG---DVWTPQDALAMLEQTGCDGVMIGRAALGNPWIFRR 236
>UniRef50_Q4V397 Cluster: At4g10720; n=7; Arabidopsis thaliana|Rep:
At4g10720 - Arabidopsis thaliana (Mouse-ear cress)
Length = 445
Score = 34.3 bits (75), Expect = 3.4
Identities = 18/63 (28%), Positives = 35/63 (55%)
Frame = -1
Query: 195 LHAWAGKNGYSLPKYNTQHIEKLFRTIVTFNEKKYTSTFWEKNKKFAEQGAALVCLHHLG 16
+ W GK+G SLPK ++ + ++ R+ ++F E +T T +N+ +AL+ + L
Sbjct: 242 IRKWGGKSGNSLPK--SKKVSEILRSPISFTEHLFTQTARYRNQTSEGTRSALLVIAALI 299
Query: 15 IVS 7
I +
Sbjct: 300 ITA 302
>UniRef50_A7AQM0 Cluster: Dihydrouridine synthase, putative; n=1;
Babesia bovis|Rep: Dihydrouridine synthase, putative -
Babesia bovis
Length = 355
Score = 34.3 bits (75), Expect = 3.4
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 3/122 (2%)
Frame = -1
Query: 759 AVHTDIIHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCSIFRK 580
A D I + + IPVIANGG IE +DV TG+ +VM + + +F
Sbjct: 183 AADWDAIRIIKSRLRIPVIANGG---IETFADVERCLSYTGADAVMSSESLLERPYLFSG 239
Query: 579 EGLLPMDTVIKDYLKLAVDY-DNSPSNTK-YCIQNILRDLQETPRGRQFL-ESQTLEQIC 409
+D ++ +YL + Y D SP + + + + + Q P R L ++ +L+
Sbjct: 240 ITYDHLD-IMDEYLGIVRRYPDQSPCCIRGHAFKILFQHCQRHPEIRNRLTDAMSLDDFS 298
Query: 408 SI 403
S+
Sbjct: 299 SV 300
>UniRef50_P37567 Cluster: Probable tRNA-dihydrouridine synthase 1;
n=31; Bacilli|Rep: Probable tRNA-dihydrouridine synthase
1 - Bacillus subtilis
Length = 333
Score = 34.3 bits (75), Expect = 3.4
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = -1
Query: 747 DIIHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWN 598
DII V ++SIPVI NG +++ D + TG VM+ RAA N
Sbjct: 186 DIIKEVKQSVSIPVIGNG---DVKTPQDAKRMLDETGVDGVMIGRAALGN 232
>UniRef50_Q6G9G6 Cluster: Dihydrodipicolinate synthase; n=16;
Staphylococcus|Rep: Dihydrodipicolinate synthase -
Staphylococcus aureus (strain MSSA476)
Length = 295
Score = 34.3 bits (75), Expect = 3.4
Identities = 24/77 (31%), Positives = 38/77 (49%)
Frame = -1
Query: 714 IPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCSIFRKEGLLPMDTVIKDYLK 535
+PVIA G+ + EK +I + G+ ++ML +N + + GL+ I D +K
Sbjct: 73 VPVIAGTGTNDTEKSIQASIQAKALGADAIMLI-TPYYNKT--NQRGLVKHFEAIADAVK 129
Query: 534 LAVDYDNSPSNTKYCIQ 484
L V N PS T I+
Sbjct: 130 LPVVLYNVPSRTNMTIE 146
>UniRef50_Q31II6 Cluster: Dihydrouridine synthase; n=1;
Thiomicrospira crunogena XCL-2|Rep: Dihydrouridine
synthase - Thiomicrospira crunogena (strain XCL-2)
Length = 320
Score = 33.9 bits (74), Expect = 4.5
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = -1
Query: 747 DIIHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCSIFRK 580
D I V + IPVIANG +I + + TGS +M+ RAA+ IFR+
Sbjct: 184 DTIKAVKQAVDIPVIANG---DICSPKEAQFVLKYTGSDGIMIGRAAQGYPWIFRE 236
>UniRef50_A4XH30 Cluster: Putative TIM-barrel protein, nifR3 family;
n=1; Caldicellulosiruptor saccharolyticus DSM 8903|Rep:
Putative TIM-barrel protein, nifR3 family -
Caldicellulosiruptor saccharolyticus (strain ATCC 43494
/ DSM 8903)
Length = 328
Score = 33.9 bits (74), Expect = 4.5
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = -1
Query: 747 DIIHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCSIFR--KEG 574
+II V + + IPV+ANG + E E+T + S+M+ RAA N +F KEG
Sbjct: 181 EIIKMVKEKVKIPVVANGDIVDFESAKKA---YEITEADSIMIGRAALGNPWVFLQIKEG 237
>UniRef50_A5BT61 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 90
Score = 33.9 bits (74), Expect = 4.5
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = -1
Query: 417 QICSIWDLGGYCLEKQSQFQKMGIQG 340
Q +IW++GG C+EKQ +F K+ +G
Sbjct: 47 QATNIWEVGGACVEKQRKFGKLSSEG 72
>UniRef50_A1D8W3 Cluster: RNA exonuclease, putative; n=3;
Trichocomaceae|Rep: RNA exonuclease, putative -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 426
Score = 33.9 bits (74), Expect = 4.5
Identities = 23/101 (22%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Frame = -1
Query: 630 SVMLARAAEWNCSIFRKEGLLPMDTVIKDYLKLAVDYDNSPSNTKYCIQNILRDLQETPR 451
++++ ++ + + I R L +DT I +A D + + C Q + RD+Q++ R
Sbjct: 299 TILVGQSLQHDLDIMRMVHLNIIDTAILSREAVAKDCKQNWGLKRLCKQMLDRDIQQSRR 358
Query: 450 GRQFLESQTLEQICSIWDLGGYCLEKQSQFQKMGI-QGRWQ 331
G LE + +W C+ +FQ+ + Q W+
Sbjct: 359 GHNCLEDTMATREVVLW-----CVRHPGKFQEWAVSQREWK 394
>UniRef50_Q74EF7 Cluster: Dihydrouridine synthase family protein;
n=2; Deltaproteobacteria|Rep: Dihydrouridine synthase
family protein - Geobacter sulfurreducens
Length = 325
Score = 33.5 bits (73), Expect = 5.9
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = -1
Query: 720 ISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCSIFRK 580
++IPVI GS ++ +DVA + TG VM+AR A N IFR+
Sbjct: 196 VAIPVI---GSGDLFSAADVAAMLDRTGCDGVMIARGALGNPWIFRQ 239
>UniRef50_Q6SFW7 Cluster: NifR3/Smm1 family protein; n=1; uncultured
bacterium 578|Rep: NifR3/Smm1 family protein -
uncultured bacterium 578
Length = 322
Score = 33.5 bits (73), Expect = 5.9
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -1
Query: 747 DIIHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWN 598
D + + +SIPV+ANG +K V + TG+ +VML RA + N
Sbjct: 184 DTVKKIKGIVSIPVVANGDITSAQKAKKVL---DYTGADAVMLGRATQGN 230
>UniRef50_Q251N6 Cluster: Putative uncharacterized protein; n=2;
Desulfitobacterium hafniense|Rep: Putative
uncharacterized protein - Desulfitobacterium hafniense
(strain Y51)
Length = 326
Score = 33.5 bits (73), Expect = 5.9
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Frame = -1
Query: 747 DIIHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAA---EW---NCSIF 586
D I V +SIPVIANG +I + E TG VM+ R + W ++F
Sbjct: 189 DGIKKVKGGVSIPVIANG---DIFSPQEAKTVLEATGCDGVMVGRGSLGNPWLIPQINVF 245
Query: 585 RKEGLLPMDTVIKDYLKLAVDYDNSPSNTK 496
+G+L + ++ LK+A ++ N K
Sbjct: 246 LNKGVLLEEPSLEQKLKVATEHFERVLNYK 275
>UniRef50_Q11I59 Cluster: Putative uncharacterized protein
precursor; n=1; Mesorhizobium sp. BNC1|Rep: Putative
uncharacterized protein precursor - Mesorhizobium sp.
(strain BNC1)
Length = 1538
Score = 33.5 bits (73), Expect = 5.9
Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +2
Query: 509 GELS*STASLR*SFITVSIGNNPSFLNIEQFHSA--ARANITLLEPVISLNIATSLCFSI 682
GE S TASL F N + LNIE H+ A N+TL I+ ++AT I
Sbjct: 357 GETSLRTASLAARFGAAGGENWNASLNIENLHTGTFAAENVTLTIEGIAADLATPANRRI 416
Query: 683 SLDPPFAMTGI 715
+ D A+TGI
Sbjct: 417 TYDGQGAVTGI 427
>UniRef50_A7SFT0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 949
Score = 33.5 bits (73), Expect = 5.9
Identities = 22/67 (32%), Positives = 28/67 (41%)
Frame = -1
Query: 204 KSRLHAWAGKNGYSLPKYNTQHIEKLFRTIVTFNEKKYTSTFWEKNKKFAEQGAALVCLH 25
K+ L +A + LP Y F V F +Y S KK AEQ AA L
Sbjct: 142 KNILQEFAQGSAKLLPSYTVDTTNSGFIAEVNFEGVRYKSKIAHSTKKAAEQNAAESALQ 201
Query: 24 HLGIVSE 4
LG+V +
Sbjct: 202 ALGLVRD 208
>UniRef50_Q5KGP0 Cluster: Putative uncharacterized protein; n=3;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 496
Score = 33.5 bits (73), Expect = 5.9
Identities = 29/79 (36%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = -1
Query: 714 IPVIANGGSKEIEKHSDVAIFKEMTGS--SSVMLARAAEWNCSIFRKEGLLPMDTVIKDY 541
I VI NG + + M S SVMLAR+AE N S+F G L T I
Sbjct: 307 ISVICNGDGEGWSNWDRIRNETGMCASCADSVMLARSAERNPSVFLPSGPLNTVTDIIPK 366
Query: 540 LKLAVDYDNSP-SNTKYCI 487
L DY +P NTK+ +
Sbjct: 367 LLALSDYLKNPWGNTKFLL 385
>UniRef50_Q4FPR0 Cluster: DNA primase; n=2; Candidatus Pelagibacter
ubique|Rep: DNA primase - Pelagibacter ubique
Length = 591
Score = 33.1 bits (72), Expect = 7.9
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -1
Query: 387 YCLEKQSQFQKMGIQGRWQVCPKQLEPPQKKAKHYNEEDLCDAIQMK-VSFIRANFNDLN 211
+ LEK S G+ Q K+++ Q KH+NE L +++K S + N+L+
Sbjct: 412 FFLEKISSLTPHSNIGKKQFYTKKVKSLQSTQKHFNESKLLSGVELKEFSLLYLIMNNLD 471
Query: 210 LPKSRLHAWAGKNGYS 163
L + +H N +S
Sbjct: 472 LFQENIHMIENINLFS 487
>UniRef50_Q489F6 Cluster: NifR3/Smm1 family protein; n=2;
Proteobacteria|Rep: NifR3/Smm1 family protein -
Colwellia psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 338
Score = 33.1 bits (72), Expect = 7.9
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = -1
Query: 747 DIIHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCSIFRK 580
D I + ISIPV+ANG EK V + TG+ ++M+ R A+ IFR+
Sbjct: 184 DTIKAIKLAISIPVVANGDITSPEKALQVL---DHTGADAIMVGRGAQGRPWIFRE 236
>UniRef50_Q29KM3 Cluster: GA14905-PA; n=1; Drosophila
pseudoobscura|Rep: GA14905-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 992
Score = 33.1 bits (72), Expect = 7.9
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = -1
Query: 303 QKKAKHYNE-EDLCDAIQMKVSFIRANFNDLNLPKSRLHAWAGKNGYSLPKYNTQHIEKL 127
QK A H + + ++ K+ +R ++LN + LH+ NG + + T+H+ +L
Sbjct: 830 QKGADHIKQLRQERNILKDKIEALRMERDELNNSLTHLHSILPANGAPVTRQGTEHVRQL 889
Query: 126 FRTIVTFN 103
+ V +N
Sbjct: 890 YEIYVRYN 897
>UniRef50_Q16FM5 Cluster: LL5 beta protein, putative; n=2; Aedes
aegypti|Rep: LL5 beta protein, putative - Aedes aegypti
(Yellowfever mosquito)
Length = 2242
Score = 33.1 bits (72), Expect = 7.9
Identities = 33/141 (23%), Positives = 66/141 (46%), Gaps = 11/141 (7%)
Frame = -1
Query: 486 QNILRDLQETPRGRQFLESQTLEQICSIWDLGGYCLEKQSQFQ-------KMGIQ-GRWQ 331
+ + + ++E G + LE + + + DL +EK QF+ +M ++ R +
Sbjct: 1074 KELQKQIEEAAAGSEKLEQEIKQMNKAQSDLQAQLIEKLEQFKCVSNERDEMEVKCARLE 1133
Query: 330 VCPKQLEPPQKKAKHYNEEDLCD---AIQMKVSFIRANFNDLNLPKSRLHAWAGKNGYSL 160
V K+L+ ++ KH + C+ A++ ++ +R + L KSR+ KN +L
Sbjct: 1134 VDMKELQADLEEQKHMTTSN-CEAKAALEAQLLAVREELSQLEQDKSRVEETLEKNRATL 1192
Query: 159 PKYNTQHIEKLFRTIVTFNEK 97
+ T+ I +L R +EK
Sbjct: 1193 EE-RTETISRLSREKELLSEK 1212
>UniRef50_O29352 Cluster: Dihydrodipicolinate synthase; n=2;
Euryarchaeota|Rep: Dihydrodipicolinate synthase -
Archaeoglobus fulgidus
Length = 289
Score = 33.1 bits (72), Expect = 7.9
Identities = 23/85 (27%), Positives = 36/85 (42%)
Frame = -1
Query: 753 HTDIIHYVADNISIPVIANGGSKEIEKHSDVAIFKEMTGSSSVMLARAAEWNCSIFRKEG 574
H D++ YVA+ +PVI GS + +A E G+ + ML +N EG
Sbjct: 55 HIDVVRYVAETSKLPVIGGAGSNSTREAIWLAKEVEKAGAEAAMLV-TPYYNKP--NAEG 111
Query: 573 LLPMDTVIKDYLKLAVDYDNSPSNT 499
L + + + + N PS T
Sbjct: 112 LYQHYKAVASEVSIPIIVYNVPSRT 136
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 724,299,391
Number of Sequences: 1657284
Number of extensions: 14081166
Number of successful extensions: 36585
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 35188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36544
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64615845515
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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