Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte11d01
         (842 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341235-1|AAR13799.1|  196|Anopheles gambiae transferrin-like p...    29   0.23 
AY341234-1|AAR13798.1|  196|Anopheles gambiae transferrin-like p...    29   0.23 
AY341232-1|AAR13796.1|  196|Anopheles gambiae transferrin-like p...    29   0.23 
AY341233-1|AAR13797.1|  196|Anopheles gambiae transferrin-like p...    27   0.71 
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    27   0.71 
AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    24   5.0  
AY745213-1|AAU93480.1|  171|Anopheles gambiae cytochrome P450 pr...    24   6.7  

>AY341235-1|AAR13799.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 28.7 bits (61), Expect = 0.23
 Identities = 16/66 (24%), Positives = 27/66 (40%)
 Frame = -3

Query: 294 STICKTADKIGLQDECDNERHNMCVICQSILKPDEKAISALDATSISKIVSLRKHTDSAI 115
           S  C    +  L D       N+C +C+   KP  + +    AT    +     +TDS +
Sbjct: 105 SESCAPGSRDDLHDPTGEHAENLCALCRYAEKPTPRELGTYQATDDEGL-----NTDSPL 159

Query: 114 DVDMEK 97
           + D E+
Sbjct: 160 EDDAEE 165


>AY341234-1|AAR13798.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 28.7 bits (61), Expect = 0.23
 Identities = 16/66 (24%), Positives = 27/66 (40%)
 Frame = -3

Query: 294 STICKTADKIGLQDECDNERHNMCVICQSILKPDEKAISALDATSISKIVSLRKHTDSAI 115
           S  C    +  L D       N+C +C+   KP  + +    AT    +     +TDS +
Sbjct: 105 SESCAPGSRDDLHDPTGEHAENLCALCRYAEKPTPRELGTYQATDDEGL-----NTDSPL 159

Query: 114 DVDMEK 97
           + D E+
Sbjct: 160 EDDAEE 165


>AY341232-1|AAR13796.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 28.7 bits (61), Expect = 0.23
 Identities = 16/66 (24%), Positives = 27/66 (40%)
 Frame = -3

Query: 294 STICKTADKIGLQDECDNERHNMCVICQSILKPDEKAISALDATSISKIVSLRKHTDSAI 115
           S  C    +  L D       N+C +C+   KP  + +    AT    +     +TDS +
Sbjct: 105 SESCAPGSRDDLHDPTGEHAENLCALCRYAEKPTPRELGTYQATDDEGL-----NTDSPL 159

Query: 114 DVDMEK 97
           + D E+
Sbjct: 160 EDDAEE 165


>AY341233-1|AAR13797.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 27.1 bits (57), Expect = 0.71
 Identities = 15/66 (22%), Positives = 26/66 (39%)
 Frame = -3

Query: 294 STICKTADKIGLQDECDNERHNMCVICQSILKPDEKAISALDATSISKIVSLRKHTDSAI 115
           S  C    +  L D       N+C +C+   KP  + +    A     +     +TDS +
Sbjct: 105 SESCAPGSRDDLHDPTGEHAENLCALCRYAEKPTPRELGTYQAADDDGL-----YTDSPL 159

Query: 114 DVDMEK 97
           + D E+
Sbjct: 160 EDDAEE 165


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 27.1 bits (57), Expect = 0.71
 Identities = 22/111 (19%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
 Frame = -3

Query: 453 MKDISEEELKLYINSKNLKVNDKQTSKENEHTSLQTVIST-FVSSLQENFPSTISTICKT 277
           ++ ++E+E   +  +   +++   T++E + + L+ ++ST F      ++P++   + + 
Sbjct: 351 LRGLAEDETGQWYRNVLSRLSGSWTARERDSSVLEVIVSTLFPQHPPVDWPASPGQVLER 410

Query: 276 ADKIGLQDECDNERHNMCVICQSILKPDEKAISALDATSISKIVSLRKHTD 124
            ++  ++D   NE+  + +   S L P  KA       + +   ++RKHTD
Sbjct: 411 GEEEPVRDV--NEQELLDI--ASSLNP-RKAPGLDGVPNAALTAAIRKHTD 456


>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
 Frame = -3

Query: 480 DMEIKIIRPMKDISEEELKLYINSKNLKVNDKQTSKENEHTSLQTVISTFVSSLQENFPS 301
           D+EIKIIR   D  E E K       +       + +  H+  + V S  ++SL    P 
Sbjct: 158 DVEIKIIRRKGDPVEPEAKKATAEPPVANTAAAATPKARHSIPEVVKSVPITSLDPAVPE 217

Query: 300 TIST-ICK 280
             +  +CK
Sbjct: 218 LANLGLCK 225


>AY745213-1|AAU93480.1|  171|Anopheles gambiae cytochrome P450
           protein.
          Length = 171

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -1

Query: 686 CKIACYQQLKMIS*LILRELYILDMQSF*IANIFSLVKQQPLWPQN 549
           C +A     K I  + L E Y++      + N+F+L +Q+  W  N
Sbjct: 115 CPVAAVYGRKTIGTIQLDE-YVIPKGFILLLNVFALHRQKEFWGPN 159


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 819,876
Number of Sequences: 2352
Number of extensions: 16242
Number of successful extensions: 23
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89305416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)