Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11c19
(786 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118414-1|AAM48443.1| 364|Drosophila melanogaster RE67917p pro... 77 4e-14
AE014296-1064|AAF50699.1| 364|Drosophila melanogaster CG10467-P... 77 4e-14
AY122103-1|AAM52615.1| 367|Drosophila melanogaster GH10091p pro... 70 3e-12
AE014296-3594|AAN12184.1| 367|Drosophila melanogaster CG32445-P... 70 3e-12
BT022324-1|AAY54740.1| 334|Drosophila melanogaster IP11335p pro... 69 5e-12
AE014134-2089|AAF53115.1| 368|Drosophila melanogaster CG4988-PA... 69 5e-12
AY094690-1|AAM11043.1| 370|Drosophila melanogaster GH08902p pro... 62 1e-09
AE014296-3593|AAF51760.3| 370|Drosophila melanogaster CG32444-P... 62 1e-09
BT024330-1|ABC86392.1| 398|Drosophila melanogaster IP10617p pro... 60 3e-09
AE014298-1965|AAF48321.1| 392|Drosophila melanogaster CG10996-P... 60 3e-09
>AY118414-1|AAM48443.1| 364|Drosophila melanogaster RE67917p
protein.
Length = 364
Score = 76.6 bits (180), Expect = 4e-14
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = -3
Query: 319 GYVPLMGKQGTFYKKHGLFCLMPQNYPDAVNHTNFPNSVLNPGEVYVHRIQYKFGI 152
G P+ GK G Y KH FCL Q +PD+VNH+NFP+++L PGE Y H + YKFG+
Sbjct: 307 GESPIPGKDGAAYAKHCAFCLETQKFPDSVNHSNFPSTILRPGESYQHEVIYKFGV 362
Score = 76.2 bits (179), Expect = 5e-14
Identities = 43/106 (40%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Frame = -3
Query: 781 MYDHIFTINADKYTAADDDXXXXXXXXXXXXTIFDFRVPRVLRTMLPRVAMG-GYDINYC 605
+Y+H INA T D T FD RV L L + GYD N+C
Sbjct: 201 LYEHTIKINAYGITETDQSSIPTGRITPVEGTGFDLRVSSNLGERLKALQPARGYDDNFC 260
Query: 604 VTQGTAQDLTFHARALHPVTGRVMELYSNQPGLQFYTGNLLPDPDK 467
VT Q L ARA HP +GR +E+ SNQPG+QFYT N +PD ++
Sbjct: 261 VTFSPPQPLAKVARATHPPSGRWLEVVSNQPGVQFYTSNFMPDVER 306
>AE014296-1064|AAF50699.1| 364|Drosophila melanogaster CG10467-PA
protein.
Length = 364
Score = 76.6 bits (180), Expect = 4e-14
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = -3
Query: 319 GYVPLMGKQGTFYKKHGLFCLMPQNYPDAVNHTNFPNSVLNPGEVYVHRIQYKFGI 152
G P+ GK G Y KH FCL Q +PD+VNH+NFP+++L PGE Y H + YKFG+
Sbjct: 307 GESPIPGKDGAAYAKHCAFCLETQKFPDSVNHSNFPSTILRPGESYQHEVIYKFGV 362
Score = 76.2 bits (179), Expect = 5e-14
Identities = 43/106 (40%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Frame = -3
Query: 781 MYDHIFTINADKYTAADDDXXXXXXXXXXXXTIFDFRVPRVLRTMLPRVAMG-GYDINYC 605
+Y+H INA T D T FD RV L L + GYD N+C
Sbjct: 201 LYEHTIEINAYGITETDQSSIPTGRITPVEGTGFDLRVSSNLGERLKALQPARGYDDNFC 260
Query: 604 VTQGTAQDLTFHARALHPVTGRVMELYSNQPGLQFYTGNLLPDPDK 467
VT Q L ARA HP +GR +E+ SNQPG+QFYT N +PD ++
Sbjct: 261 VTFSPPQPLAKVARATHPPSGRWLEVVSNQPGVQFYTSNFMPDVER 306
>AY122103-1|AAM52615.1| 367|Drosophila melanogaster GH10091p
protein.
Length = 367
Score = 70.1 bits (164), Expect = 3e-12
Identities = 27/53 (50%), Positives = 38/53 (71%)
Frame = -3
Query: 313 VPLMGKQGTFYKKHGLFCLMPQNYPDAVNHTNFPNSVLNPGEVYVHRIQYKFG 155
+P+ GK G Y + G F L Q YPDA+NH +FP+ VLNPG++Y H++ Y+FG
Sbjct: 309 IPIAGKDGVNYVRQGAFTLETQKYPDAMNHCDFPSVVLNPGQLYDHQVVYRFG 361
Score = 62.9 bits (146), Expect = 5e-10
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Frame = -3
Query: 784 TMYDHIFTINADKYTAADDDXXXXXXXXXXXXTIFDFRVPRVLRTMLPRVA---MGGYDI 614
T+Y H+ I A K D + T +DF L L +V+ +GG+D
Sbjct: 199 TLYQHMLMIKAQKIVDVDQELLPTGKLMRVRTTPYDFSSLVSLGKRLNQVSTCPLGGFDN 258
Query: 613 NYCVTQGTAQDLTFHARALHPVTGRVMELYSNQPGLQFYTGNLLPDPD 470
++CV + + AR +HP +GR ME+++NQPGLQF T N LP D
Sbjct: 259 HFCVDIPPNR-VQLVARVVHPCSGRFMEVHTNQPGLQFSTANHLPSED 305
>AE014296-3594|AAN12184.1| 367|Drosophila melanogaster CG32445-PA
protein.
Length = 367
Score = 70.1 bits (164), Expect = 3e-12
Identities = 27/53 (50%), Positives = 38/53 (71%)
Frame = -3
Query: 313 VPLMGKQGTFYKKHGLFCLMPQNYPDAVNHTNFPNSVLNPGEVYVHRIQYKFG 155
+P+ GK G Y + G F L Q YPDA+NH +FP+ VLNPG++Y H++ Y+FG
Sbjct: 309 IPIAGKDGVNYVRQGAFTLETQKYPDAMNHCDFPSVVLNPGQLYDHQVVYRFG 361
Score = 62.9 bits (146), Expect = 5e-10
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Frame = -3
Query: 784 TMYDHIFTINADKYTAADDDXXXXXXXXXXXXTIFDFRVPRVLRTMLPRVA---MGGYDI 614
T+Y H+ I A K D + T +DF L L +V+ +GG+D
Sbjct: 199 TLYQHMLMIKAQKIVDVDQELLPTGKLMRVRTTPYDFSSLVSLGKRLNQVSTCPLGGFDN 258
Query: 613 NYCVTQGTAQDLTFHARALHPVTGRVMELYSNQPGLQFYTGNLLPDPD 470
++CV + + AR +HP +GR ME+++NQPGLQF T N LP D
Sbjct: 259 HFCVDIPPNR-VQLVARVVHPCSGRFMEVHTNQPGLQFSTANHLPSED 305
>BT022324-1|AAY54740.1| 334|Drosophila melanogaster IP11335p
protein.
Length = 334
Score = 69.3 bits (162), Expect = 5e-12
Identities = 30/76 (39%), Positives = 42/76 (55%)
Frame = -3
Query: 379 SSVAGEVMNEEESVEGKTSVGYVPLMGKQGTFYKKHGLFCLMPQNYPDAVNHTNFPNSVL 200
S A EV + ++ T+ + GK+G FY KHG C+ +PDA+NH NFP+ L
Sbjct: 249 SGRALEVWTNQPGIQFYTANNITKITGKKGLFYVKHGALCVQTVKFPDAINHQNFPSINL 308
Query: 199 NPGEVYVHRIQYKFGI 152
NP E Y H + Y F +
Sbjct: 309 NPNETYRHEVVYWFKV 324
Score = 50.4 bits (115), Expect = 3e-06
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Frame = -3
Query: 775 DHIFTINADKYTAADDDXXXXXXXXXXXXTIFDFRVPRVLRTMLPRVA---MGGYDINYC 605
+H I + + DD T +D R P VL L + + G+D Y
Sbjct: 169 EHTVEIASSEIVETDDRQIPTGELTLVDNTAYDLRSPVVLGDRLKQFENCPIQGFDNCYV 228
Query: 604 VTQGTAQDLTFH-ARALHPVTGRVMELYSNQPGLQFYTGN 488
V G T A+ +HP +GR +E+++NQPG+QFYT N
Sbjct: 229 VNGGQLLRSTVKVAKIVHPPSGRALEVWTNQPGIQFYTAN 268
>AE014134-2089|AAF53115.1| 368|Drosophila melanogaster CG4988-PA
protein.
Length = 368
Score = 69.3 bits (162), Expect = 5e-12
Identities = 30/76 (39%), Positives = 42/76 (55%)
Frame = -3
Query: 379 SSVAGEVMNEEESVEGKTSVGYVPLMGKQGTFYKKHGLFCLMPQNYPDAVNHTNFPNSVL 200
S A EV + ++ T+ + GK+G FY KHG C+ +PDA+NH NFP+ L
Sbjct: 283 SGRALEVWTNQPGIQFYTANNITKITGKKGLFYVKHGALCVQTVKFPDAINHQNFPSINL 342
Query: 199 NPGEVYVHRIQYKFGI 152
NP E Y H + Y F +
Sbjct: 343 NPNETYRHEVVYWFKV 358
Score = 50.4 bits (115), Expect = 3e-06
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Frame = -3
Query: 775 DHIFTINADKYTAADDDXXXXXXXXXXXXTIFDFRVPRVLRTMLPRVA---MGGYDINYC 605
+H I + + DD T +D R P VL L + + G+D Y
Sbjct: 203 EHTVEIASSEIVETDDRQIPTGELTLVDNTAYDLRSPVVLGDRLKQFENCPIQGFDNCYV 262
Query: 604 VTQGTAQDLTFH-ARALHPVTGRVMELYSNQPGLQFYTGN 488
V G T A+ +HP +GR +E+++NQPG+QFYT N
Sbjct: 263 VNGGQLLRSTVKVAKIVHPPSGRALEVWTNQPGIQFYTAN 302
>AY094690-1|AAM11043.1| 370|Drosophila melanogaster GH08902p
protein.
Length = 370
Score = 61.7 bits (143), Expect = 1e-09
Identities = 26/71 (36%), Positives = 41/71 (57%)
Frame = -3
Query: 364 EVMNEEESVEGKTSVGYVPLMGKQGTFYKKHGLFCLMPQNYPDAVNHTNFPNSVLNPGEV 185
EV ++ ++ T+ ++GK T Y+KHG FC+ + +PDA+NH FP+ L P E
Sbjct: 288 EVWTDQPGMQFYTANNLTSIVGKNCTKYEKHGSFCVETEKFPDAMNHPEFPSISLEPNEK 347
Query: 184 YVHRIQYKFGI 152
Y H + Y F +
Sbjct: 348 YRHDVLYWFKV 358
Score = 52.4 bits (120), Expect = 7e-07
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Frame = -3
Query: 775 DHIFTINADKYTAADDDXXXXXXXXXXXXTIFDFRVPRVLRTMLPRVA---MGGYDINYC 605
+H I +D+ D+ T+FD R+P ++R L + + GYD +
Sbjct: 203 EHTVEIASDQIVDTDELQIPTGKLVDVKDTVFDLRLPVLMRDRLMQFENRQIKGYDNCFV 262
Query: 604 VTQGTAQ-DLTFHARALHPVTGRVMELYSNQPGLQFYTGNLL 482
V G Q + A+ +HP + RV+E++++QPG+QFYT N L
Sbjct: 263 VNGGRVQKSVAKVAKIVHPPSCRVLEVWTDQPGMQFYTANNL 304
>AE014296-3593|AAF51760.3| 370|Drosophila melanogaster CG32444-PA
protein.
Length = 370
Score = 61.7 bits (143), Expect = 1e-09
Identities = 26/71 (36%), Positives = 41/71 (57%)
Frame = -3
Query: 364 EVMNEEESVEGKTSVGYVPLMGKQGTFYKKHGLFCLMPQNYPDAVNHTNFPNSVLNPGEV 185
EV ++ ++ T+ ++GK T Y+KHG FC+ + +PDA+NH FP+ L P E
Sbjct: 288 EVWTDQPGMQFYTANNLTSIVGKNCTKYEKHGSFCVETEKFPDAMNHPEFPSISLEPNEK 347
Query: 184 YVHRIQYKFGI 152
Y H + Y F +
Sbjct: 348 YRHDVLYWFKV 358
Score = 52.4 bits (120), Expect = 7e-07
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Frame = -3
Query: 775 DHIFTINADKYTAADDDXXXXXXXXXXXXTIFDFRVPRVLRTMLPRVA---MGGYDINYC 605
+H I +D+ D+ T+FD R+P ++R L + + GYD +
Sbjct: 203 EHTVEIASDQIVDTDELQIPTGKLVDVKDTVFDLRLPVLMRDRLMQFENRQIKGYDNCFV 262
Query: 604 VTQGTAQ-DLTFHARALHPVTGRVMELYSNQPGLQFYTGNLL 482
V G Q + A+ +HP + RV+E++++QPG+QFYT N L
Sbjct: 263 VNGGRVQKSVAKVAKIVHPPSCRVLEVWTDQPGMQFYTANNL 304
>BT024330-1|ABC86392.1| 398|Drosophila melanogaster IP10617p
protein.
Length = 398
Score = 60.1 bits (139), Expect = 3e-09
Identities = 27/57 (47%), Positives = 35/57 (61%)
Frame = -3
Query: 322 VGYVPLMGKQGTFYKKHGLFCLMPQNYPDAVNHTNFPNSVLNPGEVYVHRIQYKFGI 152
+G P++GK+ T Y +H F L NYPDAVN +FP +NPGE Y H Y FG+
Sbjct: 315 LGEPPILGKKCTRYWQHCGFSLQLLNYPDAVNQPDFPRIFINPGEHYFHETIYHFGV 371
Score = 46.8 bits (106), Expect = 3e-05
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 5/106 (4%)
Frame = -3
Query: 781 MYDHIFTINA-DKYTAADDDXXXXXXXXXXXXTIFDFRVPRVLRTML---PRVAMGGYDI 614
++DH I A + ++ D +++D R+P + + + + GYD+
Sbjct: 206 IFDHQINIEAIETMETSNGDGLPTGRFKNVNDSVYDIRLPVFMGDRVRQFEKKPVKGYDV 265
Query: 613 NYCVTQG-TAQDLTFHARALHPVTGRVMELYSNQPGLQFYTGNLLP 479
+ + + A + R LHP +GR ME++SNQP ++F TGN P
Sbjct: 266 CFALDKEFDAIRTRYVGRFLHPDSGRFMEIFSNQPCVKFTTGNCFP 311
>AE014298-1965|AAF48321.1| 392|Drosophila melanogaster CG10996-PA
protein.
Length = 392
Score = 60.1 bits (139), Expect = 3e-09
Identities = 27/57 (47%), Positives = 35/57 (61%)
Frame = -3
Query: 322 VGYVPLMGKQGTFYKKHGLFCLMPQNYPDAVNHTNFPNSVLNPGEVYVHRIQYKFGI 152
+G P++GK+ T Y +H F L NYPDAVN +FP +NPGE Y H Y FG+
Sbjct: 309 LGEPPILGKKCTRYWQHCGFSLQLLNYPDAVNQPDFPRIFINPGEHYFHETIYHFGV 365
Score = 46.8 bits (106), Expect = 3e-05
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 5/106 (4%)
Frame = -3
Query: 781 MYDHIFTINA-DKYTAADDDXXXXXXXXXXXXTIFDFRVPRVLRTML---PRVAMGGYDI 614
++DH I A + ++ D +++D R+P + + + + GYD+
Sbjct: 200 IFDHQINIEAIETMETSNGDGLPTGRFKNVNDSVYDIRLPVFMGDRVRQFEKKPVKGYDV 259
Query: 613 NYCVTQG-TAQDLTFHARALHPVTGRVMELYSNQPGLQFYTGNLLP 479
+ + + A + R LHP +GR ME++SNQP ++F TGN P
Sbjct: 260 CFALDKEFDAIRTRYVGRFLHPDSGRFMEIFSNQPCVKFTTGNCFP 305
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,866,842
Number of Sequences: 53049
Number of extensions: 666560
Number of successful extensions: 1576
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1576
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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