Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11c17
(874 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC131563-1|AAI31564.1| 276|Homo sapiens AASA9217 protein. 34 0.77
AY358256-1|AAQ88623.1| 276|Homo sapiens AASA9217 protein. 34 0.77
Z15005-1|CAA78727.1| 2663|Homo sapiens CENP-E protein. 32 2.4
AB209996-1|BAE06078.1| 2585|Homo sapiens CENPE variant protein p... 32 2.4
BC104960-1|AAI04961.1| 1980|Homo sapiens minichromosome maintena... 30 9.5
BC104958-1|AAI04959.1| 1980|Homo sapiens minichromosome maintena... 30 9.5
BC013285-1|AAH13285.2| 778|Homo sapiens MCM3AP protein protein. 30 9.5
BC004497-1|AAH04497.2| 566|Homo sapiens MCM3AP protein protein. 30 9.5
AY590469-1|AAS89300.1| 1980|Homo sapiens MCM3 minichromosome mai... 30 9.5
AJ010089-1|CAB52687.1| 1980|Homo sapiens GANP protein protein. 30 9.5
AB011144-1|BAA25498.1| 1872|Homo sapiens KIAA0572 protein protein. 30 9.5
AB005543-1|BAA25170.1| 721|Homo sapiens MCM3 import factor prot... 30 9.5
>BC131563-1|AAI31564.1| 276|Homo sapiens AASA9217 protein.
Length = 276
Score = 33.9 bits (74), Expect = 0.77
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = -1
Query: 733 YHSEMNAKGFTHWFTKLLQSLEELSVIIMDNAPYHSQQINQAPTSANKKSEIQEWLRE 560
YH+ N K T+ K + E V++ + HSQ I P N + +QEWL E
Sbjct: 36 YHAA-NHKAQTNEALKSTAHMIEADVLLPSDGSEHSQPIMAHPPETNSDNTLQEWLTE 92
>AY358256-1|AAQ88623.1| 276|Homo sapiens AASA9217 protein.
Length = 276
Score = 33.9 bits (74), Expect = 0.77
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = -1
Query: 733 YHSEMNAKGFTHWFTKLLQSLEELSVIIMDNAPYHSQQINQAPTSANKKSEIQEWLRE 560
YH+ N K T+ K + E V++ + HSQ I P N + +QEWL E
Sbjct: 36 YHAA-NHKAQTNEALKSTAHMIEADVLLPSDGSEHSQPIMAHPPETNSDNTLQEWLTE 92
>Z15005-1|CAA78727.1| 2663|Homo sapiens CENP-E protein.
Length = 2663
Score = 32.3 bits (70), Expect = 2.4
Identities = 26/137 (18%), Positives = 59/137 (43%)
Frame = -1
Query: 622 QINQAPTSANKKSEIQEWLREHGIEFSESELKPELLQKVHRNRPEKIYELYQLALESGHE 443
+I NK+ E E LRE I SE + P ++++ + +K EL+ + E
Sbjct: 721 KITDLQKELNKEVEENEALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKL 780
Query: 442 VIRLPPYHCQYNPIELVWAQAKNEVASKNRTFKIADVEVLVHKAISNVSQKNWEDCVKHA 263
+ + + + K+++A+ +K D E K + ++ ++ ++
Sbjct: 781 FSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEEN 840
Query: 262 EKLQEVDLKKSHLAEEF 212
E++ + + S A++F
Sbjct: 841 ERMNQEIVNLSKEAQKF 857
>AB209996-1|BAE06078.1| 2585|Homo sapiens CENPE variant protein
protein.
Length = 2585
Score = 32.3 bits (70), Expect = 2.4
Identities = 26/137 (18%), Positives = 59/137 (43%)
Frame = -1
Query: 622 QINQAPTSANKKSEIQEWLREHGIEFSESELKPELLQKVHRNRPEKIYELYQLALESGHE 443
+I NK+ E E LRE I SE + P ++++ + +K EL+ + E
Sbjct: 701 KITDLQKELNKEVEENEALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKL 760
Query: 442 VIRLPPYHCQYNPIELVWAQAKNEVASKNRTFKIADVEVLVHKAISNVSQKNWEDCVKHA 263
+ + + + K+++A+ +K D E K + ++ ++ ++
Sbjct: 761 FSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEEN 820
Query: 262 EKLQEVDLKKSHLAEEF 212
E++ + + S A++F
Sbjct: 821 ERMNQEIVNLSKEAQKF 837
>BC104960-1|AAI04961.1| 1980|Homo sapiens minichromosome maintenance
complex component 3 associated protein protein.
Length = 1980
Score = 30.3 bits (65), Expect = 9.5
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = -1
Query: 550 EFSESELKPELLQKVHRNRPEKIYELYQLALESGHEVIRLPPYHCQYNPIELVWAQAKNE 371
EF+E+ LL +H N PE + L Q L + LPP + P+ + Q ++
Sbjct: 1637 EFAEAG-GSRLLPHLHWNAPEHLAWLKQAVLGFQLPQMDLPPLGAPWLPVCSMVVQYASQ 1695
Query: 370 VASKNRTFKI--ADVEVLVHKAISNVSQKN 287
+ S +T + + VE L+H+ K+
Sbjct: 1696 IPSSRQTQPVLQSQVENLLHRTYCRWKSKS 1725
>BC104958-1|AAI04959.1| 1980|Homo sapiens minichromosome maintenance
complex component 3 associated protein protein.
Length = 1980
Score = 30.3 bits (65), Expect = 9.5
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = -1
Query: 550 EFSESELKPELLQKVHRNRPEKIYELYQLALESGHEVIRLPPYHCQYNPIELVWAQAKNE 371
EF+E+ LL +H N PE + L Q L + LPP + P+ + Q ++
Sbjct: 1637 EFAEAG-GSRLLPHLHWNAPEHLAWLKQAVLGFQLPQMDLPPLGAPWLPVCSMVVQYASQ 1695
Query: 370 VASKNRTFKI--ADVEVLVHKAISNVSQKN 287
+ S +T + + VE L+H+ K+
Sbjct: 1696 IPSSRQTQPVLQSQVENLLHRTYCRWKSKS 1725
>BC013285-1|AAH13285.2| 778|Homo sapiens MCM3AP protein protein.
Length = 778
Score = 30.3 bits (65), Expect = 9.5
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = -1
Query: 550 EFSESELKPELLQKVHRNRPEKIYELYQLALESGHEVIRLPPYHCQYNPIELVWAQAKNE 371
EF+E+ LL +H N PE + L Q L + LPP + P+ + Q ++
Sbjct: 435 EFAEAG-GSRLLPHLHWNAPEHLAWLKQAVLGFQLPQMDLPPLGAPWLPVCSMVVQYASQ 493
Query: 370 VASKNRTFKI--ADVEVLVHKAISNVSQKN 287
+ S +T + + VE L+H+ K+
Sbjct: 494 IPSSRQTQPVLQSQVENLLHRTYCRWKSKS 523
>BC004497-1|AAH04497.2| 566|Homo sapiens MCM3AP protein protein.
Length = 566
Score = 30.3 bits (65), Expect = 9.5
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = -1
Query: 550 EFSESELKPELLQKVHRNRPEKIYELYQLALESGHEVIRLPPYHCQYNPIELVWAQAKNE 371
EF+E+ LL +H N PE + L Q L + LPP + P+ + Q ++
Sbjct: 223 EFAEAG-GSRLLPHLHWNAPEHLAWLKQAVLGFQLPQMDLPPLGAPWLPVCSMVVQYASQ 281
Query: 370 VASKNRTFKI--ADVEVLVHKAISNVSQKN 287
+ S +T + + VE L+H+ K+
Sbjct: 282 IPSSRQTQPVLQSQVENLLHRTYCRWKSKS 311
>AY590469-1|AAS89300.1| 1980|Homo sapiens MCM3 minichromosome
maintenance deficient 3 (S. cerevisiae) associated
protein protein.
Length = 1980
Score = 30.3 bits (65), Expect = 9.5
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = -1
Query: 550 EFSESELKPELLQKVHRNRPEKIYELYQLALESGHEVIRLPPYHCQYNPIELVWAQAKNE 371
EF+E+ LL +H N PE + L Q L + LPP + P+ + Q ++
Sbjct: 1637 EFAEAG-GSRLLPHLHWNAPEHLAWLKQAVLGFQLPQMDLPPLGAPWLPVCSMVVQYASQ 1695
Query: 370 VASKNRTFKI--ADVEVLVHKAISNVSQKN 287
+ S +T + + VE L+H+ K+
Sbjct: 1696 IPSSRQTQPVLQSQVENLLHRTYCRWKSKS 1725
>AJ010089-1|CAB52687.1| 1980|Homo sapiens GANP protein protein.
Length = 1980
Score = 30.3 bits (65), Expect = 9.5
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = -1
Query: 550 EFSESELKPELLQKVHRNRPEKIYELYQLALESGHEVIRLPPYHCQYNPIELVWAQAKNE 371
EF+E+ LL +H N PE + L Q L + LPP + P+ + Q ++
Sbjct: 1637 EFAEAG-GSRLLPHLHWNAPEHLAWLKQAVLGFQLPQMDLPPLGAPWLPVCSMVVQYASQ 1695
Query: 370 VASKNRTFKI--ADVEVLVHKAISNVSQKN 287
+ S +T + + VE L+H+ K+
Sbjct: 1696 IPSSRQTQPVLQSQVENLLHRTYCRWKSKS 1725
>AB011144-1|BAA25498.1| 1872|Homo sapiens KIAA0572 protein protein.
Length = 1872
Score = 30.3 bits (65), Expect = 9.5
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = -1
Query: 550 EFSESELKPELLQKVHRNRPEKIYELYQLALESGHEVIRLPPYHCQYNPIELVWAQAKNE 371
EF+E+ LL +H N PE + L Q L + LPP + P+ + Q ++
Sbjct: 1529 EFAEAG-GSRLLPHLHWNAPEHLAWLKQAVLGFQLPQMDLPPLGAPWLPVCSMVVQYASQ 1587
Query: 370 VASKNRTFKI--ADVEVLVHKAISNVSQKN 287
+ S +T + + VE L+H+ K+
Sbjct: 1588 IPSSRQTQPVLQSQVENLLHRTYCRWKSKS 1617
>AB005543-1|BAA25170.1| 721|Homo sapiens MCM3 import factor
protein.
Length = 721
Score = 30.3 bits (65), Expect = 9.5
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = -1
Query: 550 EFSESELKPELLQKVHRNRPEKIYELYQLALESGHEVIRLPPYHCQYNPIELVWAQAKNE 371
EF+E+ LL +H N PE + L Q L + LPP + P+ + Q ++
Sbjct: 378 EFAEAG-GSRLLPHLHWNAPEHLAWLKQAVLGFQLPQMDLPPLGAPWLPVCSMVVQYASQ 436
Query: 370 VASKNRTFKI--ADVEVLVHKAISNVSQKN 287
+ S +T + + VE L+H+ K+
Sbjct: 437 IPSSRQTQPVLQSQVENLLHRTYCRWKSKS 466
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,187,025
Number of Sequences: 237096
Number of extensions: 2425635
Number of successful extensions: 5795
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5794
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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