Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11c12
(513 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y08968-1|CAA70165.1| 111|Drosophila melanogaster Tctex protein ... 189 2e-48
AY069608-1|AAL39753.1| 111|Drosophila melanogaster LD36705p pro... 189 2e-48
AF123058-1|AAD30033.1| 111|Drosophila melanogaster dynein light... 189 2e-48
AE014297-2495|AAF55532.1| 111|Drosophila melanogaster CG12363-P... 189 2e-48
AY113461-1|AAM29466.1| 173|Drosophila melanogaster RE37471p pro... 56 4e-08
AJ863565-1|CAI10732.1| 173|Drosophila melanogaster dynein light... 56 4e-08
AE014297-1064|AAF54474.1| 173|Drosophila melanogaster CG5359-PA... 56 4e-08
BT024239-1|ABC86301.1| 179|Drosophila melanogaster IP16258p pro... 46 4e-05
AE014296-2507|AAF49639.1| 142|Drosophila melanogaster CG7276-PA... 46 4e-05
AE014296-2506|AAS64993.1| 171|Drosophila melanogaster CG7276-PB... 46 4e-05
BT025003-1|ABE01233.1| 97|Drosophila melanogaster IP05158p pro... 45 5e-05
AY070813-1|AAL48435.1| 189|Drosophila melanogaster AT23443p pro... 33 0.30
AE013599-556|AAF59159.1| 189|Drosophila melanogaster CG14763-PA... 33 0.30
AY051638-1|AAK93062.1| 400|Drosophila melanogaster GH28857p pro... 28 6.5
AE014297-3354|AAF56160.2| 400|Drosophila melanogaster CG16705-P... 28 6.5
AY069646-1|AAL39791.1| 299|Drosophila melanogaster LD41227p pro... 28 8.5
AE014134-1939|AAF52998.1| 299|Drosophila melanogaster CG6443-PA... 28 8.5
>Y08968-1|CAA70165.1| 111|Drosophila melanogaster Tctex protein
protein.
Length = 111
Score = 189 bits (461), Expect = 2e-48
Identities = 84/110 (76%), Positives = 94/110 (85%)
Frame = -2
Query: 377 NDLDEENQFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQLTKLQKPYKY 198
+D EE+QFIVDDVSK IKEAIE +IGG AYQH+ VN WT VVE+CL LTK QKPYKY
Sbjct: 2 DDSREESQFIVDDVSKTIKEAIETTIGGNAYQHDKVNNWTGQVVENCLTVLTKEQKPYKY 61
Query: 197 VVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSVFGLGI 48
+VT I+QKNGAGLHT+SSCYW+N TDGSCTVRWENKTMYCIVSVFGL +
Sbjct: 62 IVTAMIMQKNGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSVFGLAV 111
>AY069608-1|AAL39753.1| 111|Drosophila melanogaster LD36705p
protein.
Length = 111
Score = 189 bits (461), Expect = 2e-48
Identities = 84/110 (76%), Positives = 94/110 (85%)
Frame = -2
Query: 377 NDLDEENQFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQLTKLQKPYKY 198
+D EE+QFIVDDVSK IKEAIE +IGG AYQH+ VN WT VVE+CL LTK QKPYKY
Sbjct: 2 DDSREESQFIVDDVSKTIKEAIETTIGGNAYQHDKVNNWTGQVVENCLTVLTKEQKPYKY 61
Query: 197 VVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSVFGLGI 48
+VT I+QKNGAGLHT+SSCYW+N TDGSCTVRWENKTMYCIVSVFGL +
Sbjct: 62 IVTAMIMQKNGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSVFGLAV 111
>AF123058-1|AAD30033.1| 111|Drosophila melanogaster dynein light
chain subunit protein.
Length = 111
Score = 189 bits (461), Expect = 2e-48
Identities = 84/110 (76%), Positives = 94/110 (85%)
Frame = -2
Query: 377 NDLDEENQFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQLTKLQKPYKY 198
+D EE+QFIVDDVSK IKEAIE +IGG AYQH+ VN WT VVE+CL LTK QKPYKY
Sbjct: 2 DDSREESQFIVDDVSKTIKEAIETTIGGNAYQHDKVNNWTGQVVENCLTVLTKEQKPYKY 61
Query: 197 VVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSVFGLGI 48
+VT I+QKNGAGLHT+SSCYW+N TDGSCTVRWENKTMYCIVSVFGL +
Sbjct: 62 IVTAMIMQKNGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSVFGLAV 111
>AE014297-2495|AAF55532.1| 111|Drosophila melanogaster CG12363-PA
protein.
Length = 111
Score = 189 bits (461), Expect = 2e-48
Identities = 84/110 (76%), Positives = 94/110 (85%)
Frame = -2
Query: 377 NDLDEENQFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQLTKLQKPYKY 198
+D EE+QFIVDDVSK IKEAIE +IGG AYQH+ VN WT VVE+CL LTK QKPYKY
Sbjct: 2 DDSREESQFIVDDVSKTIKEAIETTIGGNAYQHDKVNNWTGQVVENCLTVLTKEQKPYKY 61
Query: 197 VVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSVFGLGI 48
+VT I+QKNGAGLHT+SSCYW+N TDGSCTVRWENKTMYCIVSVFGL +
Sbjct: 62 IVTAMIMQKNGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSVFGLAV 111
>AY113461-1|AAM29466.1| 173|Drosophila melanogaster RE37471p
protein.
Length = 173
Score = 55.6 bits (128), Expect = 4e-08
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = -2
Query: 353 FIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQL--TKLQKPYKYVVTCTI 180
F + + I+ + + Y + +WTS + + Q+ + L K YK+VV +
Sbjct: 69 FPLPTIKSIMNNVMAEKLKDKTYDKDVAKKWTSEIADEVNQQIASSSLVKRYKHVVQVML 128
Query: 179 LQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSVFG 57
Q+ GAG +S C WD D S + + N +++C+ +VFG
Sbjct: 129 GQELGAGATYNSRCCWDCDCDTSVSEVFSNTSLFCVCTVFG 169
>AJ863565-1|CAI10732.1| 173|Drosophila melanogaster dynein light
chain protein.
Length = 173
Score = 55.6 bits (128), Expect = 4e-08
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = -2
Query: 353 FIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQL--TKLQKPYKYVVTCTI 180
F + + I+ + + Y + +WTS + + Q+ + L K YK+VV +
Sbjct: 69 FPLPTIKSIMNNVMAEKLKDKTYDKDVAKKWTSEIADEVNQQIASSSLVKRYKHVVQVML 128
Query: 179 LQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSVFG 57
Q+ GAG +S C WD D S + + N +++C+ +VFG
Sbjct: 129 GQELGAGATYNSRCCWDCDCDTSVSEVFSNTSLFCVCTVFG 169
>AE014297-1064|AAF54474.1| 173|Drosophila melanogaster CG5359-PA
protein.
Length = 173
Score = 55.6 bits (128), Expect = 4e-08
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = -2
Query: 353 FIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQL--TKLQKPYKYVVTCTI 180
F + + I+ + + Y + +WTS + + Q+ + L K YK+VV +
Sbjct: 69 FPLPTIKSIMNNVMAEKLKDKTYDKDVAKKWTSEIADEVNQQIASSSLVKRYKHVVQVML 128
Query: 179 LQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSVFG 57
Q+ GAG +S C WD D S + + N +++C+ +VFG
Sbjct: 129 GQELGAGATYNSRCCWDCDCDTSVSEVFSNTSLFCVCTVFG 169
>BT024239-1|ABC86301.1| 179|Drosophila melanogaster IP16258p
protein.
Length = 179
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/102 (22%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = -2
Query: 356 QFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESC-LGQLTKLQKP-YKYVVTCT 183
+F + + +I + ++ + Y + +WT V + + + P +K+VV
Sbjct: 74 KFPLPYIRLMIAQVVKEKLANKTYNQSEALKWTREVADDINIKMKGRGSSPRFKHVVNVM 133
Query: 182 ILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSVFG 57
+ Q+ GAG + WD +D T ++ + CI +VFG
Sbjct: 134 LYQQTGAGCFYGARAIWDELSDDYITFTFDGGSFICIAAVFG 175
>AE014296-2507|AAF49639.1| 142|Drosophila melanogaster CG7276-PA,
isoform A protein.
Length = 142
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/102 (22%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = -2
Query: 356 QFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESC-LGQLTKLQKP-YKYVVTCT 183
+F + + +I + ++ + Y + +WT V + + + P +K+VV
Sbjct: 37 KFPLPYIRLMIAQVVKEKLANKTYNQSEALKWTREVADDINIKMKGRGSSPRFKHVVNVM 96
Query: 182 ILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSVFG 57
+ Q+ GAG + WD +D T ++ + CI +VFG
Sbjct: 97 LYQQTGAGCFYGARAIWDELSDDYITFTFDGGSFICIAAVFG 138
>AE014296-2506|AAS64993.1| 171|Drosophila melanogaster CG7276-PB,
isoform B protein.
Length = 171
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/102 (22%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = -2
Query: 356 QFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESC-LGQLTKLQKP-YKYVVTCT 183
+F + + +I + ++ + Y + +WT V + + + P +K+VV
Sbjct: 66 KFPLPYIRLMIAQVVKEKLANKTYNQSEALKWTREVADDINIKMKGRGSSPRFKHVVNVM 125
Query: 182 ILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSVFG 57
+ Q+ GAG + WD +D T ++ + CI +VFG
Sbjct: 126 LYQQTGAGCFYGARAIWDELSDDYITFTFDGGSFICIAAVFG 167
>BT025003-1|ABE01233.1| 97|Drosophila melanogaster IP05158p
protein.
Length = 97
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = -2
Query: 329 IIKEAIENSIGGTAYQHNNVNQWTSAVVESC-LGQLTKLQKP-YKYVVTCTILQKNGAGL 156
+I + ++ + Y + +WT V + + + P +K+VV + Q+ GAG
Sbjct: 1 MIAQVVKEKLANKTYNQSEALKWTREVADDINIKMKGRGSSPRFKHVVNVMLYQQTGAGC 60
Query: 155 HTSSSCYWDNTTDGSCTVRWENKTMYCIVSVFG 57
+ WD +D T ++ + CI +VFG
Sbjct: 61 FYGARAIWDELSDDYITFTFDGGSFICIAAVFG 93
>AY070813-1|AAL48435.1| 189|Drosophila melanogaster AT23443p
protein.
Length = 189
Score = 32.7 bits (71), Expect = 0.30
Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 2/108 (1%)
Frame = -2
Query: 371 LDEENQFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQLTKLQK--PYKY 198
L+ +N + V IIK + H + +A V + KL Y+Y
Sbjct: 79 LESKNPLNKERVENIIKAVMNRHYNDEYMFHPKHSLHMAAQVSEEIKNRIKLDNYDRYRY 138
Query: 197 VVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSVFGL 54
+V T+ + GL++ + WD DG T E + + + + F L
Sbjct: 139 IVLVTVGEFLMQGLYSMVNFLWDAEKDGFVTYSVERPSYFAVCTTFYL 186
>AE013599-556|AAF59159.1| 189|Drosophila melanogaster CG14763-PA
protein.
Length = 189
Score = 32.7 bits (71), Expect = 0.30
Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 2/108 (1%)
Frame = -2
Query: 371 LDEENQFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQLTKLQK--PYKY 198
L+ +N + V IIK + H + +A V + KL Y+Y
Sbjct: 79 LESKNPLNKERVENIIKAVMNRHYNDEYMFHPKHSLHMAAQVSEEIKNRIKLDNYDRYRY 138
Query: 197 VVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSVFGL 54
+V T+ + GL++ + WD DG T E + + + + F L
Sbjct: 139 IVLVTVGEFLMQGLYSMVNFLWDAEKDGFVTYSVERPSYFAVCTTFYL 186
>AY051638-1|AAK93062.1| 400|Drosophila melanogaster GH28857p
protein.
Length = 400
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 179 LQKNGAGLHTSSSCYWDNTTDGSCTVR 99
L K+GA LH+ WD TD CT +
Sbjct: 188 LDKSGAVLHSVRLGEWDTRTDPDCTTQ 214
>AE014297-3354|AAF56160.2| 400|Drosophila melanogaster CG16705-PA
protein.
Length = 400
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 179 LQKNGAGLHTSSSCYWDNTTDGSCTVR 99
L K+GA LH+ WD TD CT +
Sbjct: 188 LDKSGAVLHSVRLGEWDTRTDPDCTTQ 214
>AY069646-1|AAL39791.1| 299|Drosophila melanogaster LD41227p
protein.
Length = 299
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -1
Query: 312 RKFNWRHCLSTQQCQPMDFSSC 247
R+F WRHC TQQ + C
Sbjct: 30 REFRWRHCTLTQQSLQEPIAMC 51
>AE014134-1939|AAF52998.1| 299|Drosophila melanogaster CG6443-PA
protein.
Length = 299
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -1
Query: 312 RKFNWRHCLSTQQCQPMDFSSC 247
R+F WRHC TQQ + C
Sbjct: 30 REFRWRHCTLTQQSLQEPIAMC 51
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,166,904
Number of Sequences: 53049
Number of extensions: 480023
Number of successful extensions: 1137
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -