Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte11c09
         (858 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.    26   1.7  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    23   9.0  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    23   9.0  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    23   9.0  

>AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.
          Length = 115

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 8/27 (29%), Positives = 12/27 (44%)
 Frame = +2

Query: 539 HLCRCSHPHQSSNYVHCCP*KNPLRQS 619
           H C C    +   Y++ CP   P + S
Sbjct: 64  HFCECKETREPLPYMYACPGTEPCQSS 90


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 13/53 (24%), Positives = 25/53 (47%)
 Frame = +1

Query: 52  CIVKGEIFFLGVFEALLAFIGGFNSLRSSYISSPCIISRYLASFLGSIYDIPW 210
           C++   IF LGVF  +L     F +     +++  I +  L+  L  +  +P+
Sbjct: 99  CVLYSSIFVLGVFGNVLVCYVVFRNKAMQTVTNLFITNLALSDILLCVLAVPF 151


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +3

Query: 225 LTSSIFNSNVHNNWVLRLRYRIRN-TFPCFIFVIEI 329
           L+  +  +N+HN  VLR+ +R+   +  C  FV+ +
Sbjct: 120 LSPDVVQANIHNLCVLRVIWRVFGISSGCVAFVMAL 155


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 14/46 (30%), Positives = 19/46 (41%)
 Frame = +3

Query: 297 TFPCFIFVIEINFCRERFFTFSTDLWSYLWAFTLFIELTFLYQVRF 434
           TFP F+F I           F   +W  LW  TL      ++Q+ F
Sbjct: 393 TFP-FLFAIMFGDLGHGLILFLLGMWMVLWEKTLDKNKEEIWQLFF 437


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 935,984
Number of Sequences: 2352
Number of extensions: 19984
Number of successful extensions: 32
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91372671
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)