Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11c02
(356 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-3573|AAM68241.1| 122|Drosophila melanogaster CG30413-P... 33 0.081
AY070971-1|AAL48593.1| 141|Drosophila melanogaster RE06996p pro... 31 0.57
AE013599-3602|AAM68251.1| 141|Drosophila melanogaster CG30411-P... 31 0.57
AE014298-1339|ABC67180.1| 117|Drosophila melanogaster CG34026-P... 30 0.75
AY058545-1|AAL13774.1| 546|Drosophila melanogaster LD24495p pro... 28 3.0
AE013599-736|AAF59029.3| 546|Drosophila melanogaster CG8258-PA ... 28 3.0
AY113270-1|AAM29275.1| 268|Drosophila melanogaster AT16877p pro... 28 4.0
AE014297-582|AAN13348.2| 268|Drosophila melanogaster CG14605-PC... 28 4.0
AE014297-581|AAN13347.1| 432|Drosophila melanogaster CG14605-PB... 28 4.0
AE014297-580|AAF54046.3| 452|Drosophila melanogaster CG14605-PA... 28 4.0
BT003653-1|AAO39657.1| 626|Drosophila melanogaster AT01548p pro... 27 5.3
AY058477-1|AAL13706.1| 529|Drosophila melanogaster GH28335p pro... 27 5.3
AE014297-2865|AAN13835.1| 529|Drosophila melanogaster CG17838-P... 27 5.3
AE014297-2864|AAN13834.1| 529|Drosophila melanogaster CG17838-P... 27 5.3
AE014297-2863|AAN13833.1| 529|Drosophila melanogaster CG17838-P... 27 5.3
AE014297-2862|AAF55805.2| 707|Drosophila melanogaster CG17838-P... 27 5.3
AE014297-2861|AAN13831.1| 571|Drosophila melanogaster CG17838-P... 27 5.3
AE014297-2858|AAN13832.2| 563|Drosophila melanogaster CG17838-P... 27 5.3
AF172329-1|AAF02618.1| 3579|Drosophila melanogaster starry night... 27 7.0
AE013599-1158|AAF58763.4| 3574|Drosophila melanogaster CG11895-P... 27 7.0
AB028498-1|BAA84069.1| 3575|Drosophila melanogaster Flamingo pro... 27 7.0
AY118981-1|AAM50841.1| 283|Drosophila melanogaster LP01932p pro... 27 9.3
AE014134-2858|AAF53622.2| 283|Drosophila melanogaster CG5131-PA... 27 9.3
>AE013599-3573|AAM68241.1| 122|Drosophila melanogaster CG30413-PA
protein.
Length = 122
Score = 33.5 bits (73), Expect = 0.081
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = -1
Query: 173 KNYFYSSADN-KIITGIQALDSLNSK-ATVNITAGGVGYPYVNMRMKSERGSGLSYDI 6
K Y + A K IT I+ D + AT IT+GGVG V ++ S RG+G+ +
Sbjct: 59 KTYTLTQAGTAKTITYIKITDLKKMRGATAEITSGGVGSTTVTIKFTSARGAGIKSQV 116
>AY070971-1|AAL48593.1| 141|Drosophila melanogaster RE06996p
protein.
Length = 141
Score = 30.7 bits (66), Expect = 0.57
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 155 SADNKIITGIQALDSLNSKATVNITAGGVGYPYVNMRMKSERGS 24
++DN ITG+ D +A +T+GG+G +V +R + R S
Sbjct: 79 ASDNYRITGVHVEDLGADEAEAVLTSGGIGQQFVVLRCRRLRDS 122
>AE013599-3602|AAM68251.1| 141|Drosophila melanogaster CG30411-PA
protein.
Length = 141
Score = 30.7 bits (66), Expect = 0.57
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 155 SADNKIITGIQALDSLNSKATVNITAGGVGYPYVNMRMKSERGS 24
++DN ITG+ D +A +T+GG+G +V +R + R S
Sbjct: 79 ASDNYRITGVHVEDLGADEAEAVLTSGGIGQQFVVLRCRRLRDS 122
>AE014298-1339|ABC67180.1| 117|Drosophila melanogaster CG34026-PA
protein.
Length = 117
Score = 30.3 bits (65), Expect = 0.75
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = -1
Query: 179 RVKNYFYSSADNK---IITGIQALDSLNSK-ATVNITAGGVGYPYVNMRMKSERGSGL 18
+ K Y + +DN IT I+ D S AT + +GG G ++ SERG G+
Sbjct: 51 QTKKYVFKQSDNLNALTITAIKITDKKKSHGATAVLVSGGPGSKGATIKFTSERGYGI 108
>AY058545-1|AAL13774.1| 546|Drosophila melanogaster LD24495p
protein.
Length = 546
Score = 28.3 bits (60), Expect = 3.0
Identities = 23/76 (30%), Positives = 37/76 (48%)
Frame = -1
Query: 242 DISSSLVHHKLVQYNAIPFMKRVKNYFYSSADNKIITGIQALDSLNSKATVNITAGGVGY 63
+I +LV HK+ Y + ++VK +S +K L+ L SKA V+I +
Sbjct: 141 EILPNLVSHKIEDYRNV---EKVKEVLRTSIMSKQYGQEDFLNDLVSKACVSILPDEGTF 197
Query: 62 PYVNMRMKSERGSGLS 15
N+R+ GSGL+
Sbjct: 198 NVDNIRICKILGSGLT 213
>AE013599-736|AAF59029.3| 546|Drosophila melanogaster CG8258-PA
protein.
Length = 546
Score = 28.3 bits (60), Expect = 3.0
Identities = 23/76 (30%), Positives = 37/76 (48%)
Frame = -1
Query: 242 DISSSLVHHKLVQYNAIPFMKRVKNYFYSSADNKIITGIQALDSLNSKATVNITAGGVGY 63
+I +LV HK+ Y + ++VK +S +K L+ L SKA V+I +
Sbjct: 141 EILPNLVSHKIEDYRNV---EKVKEVLRTSIMSKQYGQEDFLNDLVSKACVSILPDEGTF 197
Query: 62 PYVNMRMKSERGSGLS 15
N+R+ GSGL+
Sbjct: 198 NVDNIRICKILGSGLT 213
>AY113270-1|AAM29275.1| 268|Drosophila melanogaster AT16877p
protein.
Length = 268
Score = 27.9 bits (59), Expect = 4.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 289 VCPCASVFNPIIFLSAIYPVP 227
V PC +F PI++L I P+P
Sbjct: 169 VLPCVVIFLPILYLCLIIPLP 189
>AE014297-582|AAN13348.2| 268|Drosophila melanogaster CG14605-PC,
isoform C protein.
Length = 268
Score = 27.9 bits (59), Expect = 4.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 289 VCPCASVFNPIIFLSAIYPVP 227
V PC +F PI++L I P+P
Sbjct: 169 VLPCVVIFLPILYLCLIIPLP 189
>AE014297-581|AAN13347.1| 432|Drosophila melanogaster CG14605-PB,
isoform B protein.
Length = 432
Score = 27.9 bits (59), Expect = 4.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 289 VCPCASVFNPIIFLSAIYPVP 227
V PC +F PI++L I P+P
Sbjct: 149 VLPCVVIFLPILYLCLIIPLP 169
>AE014297-580|AAF54046.3| 452|Drosophila melanogaster CG14605-PA,
isoform A protein.
Length = 452
Score = 27.9 bits (59), Expect = 4.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 289 VCPCASVFNPIIFLSAIYPVP 227
V PC +F PI++L I P+P
Sbjct: 169 VLPCVVIFLPILYLCLIIPLP 189
>BT003653-1|AAO39657.1| 626|Drosophila melanogaster AT01548p
protein.
Length = 626
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/51 (23%), Positives = 28/51 (54%)
Frame = -1
Query: 251 LVGDISSSLVHHKLVQYNAIPFMKRVKNYFYSSADNKIITGIQALDSLNSK 99
L D+S + + QY + +K++K+Y + +++ + ++A+ LN K
Sbjct: 308 LTQDVSEDKLKEQFEQYGKVERVKKIKDYAFIHFEDR-DSAVEAMRGLNGK 357
>AY058477-1|AAL13706.1| 529|Drosophila melanogaster GH28335p
protein.
Length = 529
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/51 (23%), Positives = 28/51 (54%)
Frame = -1
Query: 251 LVGDISSSLVHHKLVQYNAIPFMKRVKNYFYSSADNKIITGIQALDSLNSK 99
L D+S + + QY + +K++K+Y + +++ + ++A+ LN K
Sbjct: 347 LTQDVSEDKLKEQFEQYGKVERVKKIKDYAFIHFEDR-DSAVEAMRGLNGK 396
>AE014297-2865|AAN13835.1| 529|Drosophila melanogaster CG17838-PB,
isoform B protein.
Length = 529
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/51 (23%), Positives = 28/51 (54%)
Frame = -1
Query: 251 LVGDISSSLVHHKLVQYNAIPFMKRVKNYFYSSADNKIITGIQALDSLNSK 99
L D+S + + QY + +K++K+Y + +++ + ++A+ LN K
Sbjct: 347 LTQDVSEDKLKEQFEQYGKVERVKKIKDYAFIHFEDR-DSAVEAMRGLNGK 396
>AE014297-2864|AAN13834.1| 529|Drosophila melanogaster CG17838-PF,
isoform F protein.
Length = 529
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/51 (23%), Positives = 28/51 (54%)
Frame = -1
Query: 251 LVGDISSSLVHHKLVQYNAIPFMKRVKNYFYSSADNKIITGIQALDSLNSK 99
L D+S + + QY + +K++K+Y + +++ + ++A+ LN K
Sbjct: 347 LTQDVSEDKLKEQFEQYGKVERVKKIKDYAFIHFEDR-DSAVEAMRGLNGK 396
>AE014297-2863|AAN13833.1| 529|Drosophila melanogaster CG17838-PC,
isoform C protein.
Length = 529
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/51 (23%), Positives = 28/51 (54%)
Frame = -1
Query: 251 LVGDISSSLVHHKLVQYNAIPFMKRVKNYFYSSADNKIITGIQALDSLNSK 99
L D+S + + QY + +K++K+Y + +++ + ++A+ LN K
Sbjct: 347 LTQDVSEDKLKEQFEQYGKVERVKKIKDYAFIHFEDR-DSAVEAMRGLNGK 396
>AE014297-2862|AAF55805.2| 707|Drosophila melanogaster CG17838-PD,
isoform D protein.
Length = 707
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/51 (23%), Positives = 28/51 (54%)
Frame = -1
Query: 251 LVGDISSSLVHHKLVQYNAIPFMKRVKNYFYSSADNKIITGIQALDSLNSK 99
L D+S + + QY + +K++K+Y + +++ + ++A+ LN K
Sbjct: 389 LTQDVSEDKLKEQFEQYGKVERVKKIKDYAFIHFEDR-DSAVEAMRGLNGK 438
>AE014297-2861|AAN13831.1| 571|Drosophila melanogaster CG17838-PE,
isoform E protein.
Length = 571
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/51 (23%), Positives = 28/51 (54%)
Frame = -1
Query: 251 LVGDISSSLVHHKLVQYNAIPFMKRVKNYFYSSADNKIITGIQALDSLNSK 99
L D+S + + QY + +K++K+Y + +++ + ++A+ LN K
Sbjct: 389 LTQDVSEDKLKEQFEQYGKVERVKKIKDYAFIHFEDR-DSAVEAMRGLNGK 438
>AE014297-2858|AAN13832.2| 563|Drosophila melanogaster CG17838-PA,
isoform A protein.
Length = 563
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/51 (23%), Positives = 28/51 (54%)
Frame = -1
Query: 251 LVGDISSSLVHHKLVQYNAIPFMKRVKNYFYSSADNKIITGIQALDSLNSK 99
L D+S + + QY + +K++K+Y + +++ + ++A+ LN K
Sbjct: 381 LTQDVSEDKLKEQFEQYGKVERVKKIKDYAFIHFEDR-DSAVEAMRGLNGK 430
>AF172329-1|AAF02618.1| 3579|Drosophila melanogaster starry night
protein protein.
Length = 3579
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 282 LVRLCSILSFSCRRYIQFLGTSQAGPIQRDTFH 184
L + CS+L+ +C R++ G Q G + R H
Sbjct: 1684 LDKRCSLLTETCHRFLDLTGPLQVGGLPRIPAH 1716
>AE013599-1158|AAF58763.4| 3574|Drosophila melanogaster CG11895-PA
protein.
Length = 3574
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 282 LVRLCSILSFSCRRYIQFLGTSQAGPIQRDTFH 184
L + CS+L+ +C R++ G Q G + R H
Sbjct: 1684 LDKRCSLLTETCHRFLDLTGPLQVGGLPRIPAH 1716
>AB028498-1|BAA84069.1| 3575|Drosophila melanogaster Flamingo protein.
Length = 3575
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 282 LVRLCSILSFSCRRYIQFLGTSQAGPIQRDTFH 184
L + CS+L+ +C R++ G Q G + R H
Sbjct: 1685 LDKRCSLLTETCHRFLDLTGPLQVGGLPRIPAH 1717
>AY118981-1|AAM50841.1| 283|Drosophila melanogaster LP01932p
protein.
Length = 283
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 78 RSNVHGRLTVERVQRLDTCNN 140
+S VHG LT E + D CNN
Sbjct: 153 KSMVHGVLTHEMIHMFDYCNN 173
>AE014134-2858|AAF53622.2| 283|Drosophila melanogaster CG5131-PA
protein.
Length = 283
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 78 RSNVHGRLTVERVQRLDTCNN 140
+S VHG LT E + D CNN
Sbjct: 153 KSMVHGVLTHEMIHMFDYCNN 173
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,117,282
Number of Sequences: 53049
Number of extensions: 304521
Number of successful extensions: 745
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 880179048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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