Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte11b24
         (486 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside ...    25   1.0  
AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease pr...    25   1.8  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   4.2  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   5.6  
AY062203-1|AAL58564.1|  149|Anopheles gambiae cytochrome P450 CY...    23   7.3  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    22   9.7  
AJ439060-2|CAD27753.1|  135|Anopheles gambiae putative cytoskele...    22   9.7  
AJ438610-10|CAD27482.1|  135|Anopheles gambiae putative cytoskel...    22   9.7  

>AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside
           phosphorylase protein.
          Length = 353

 Score = 25.4 bits (53), Expect = 1.0
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = -1

Query: 156 HTSSSCYWDNTTDGSCTVRWENKTMYCIVSVFGLG 52
           H   +C+  +     CT+ +E +  +C  S+ G+G
Sbjct: 295 HCGMTCFAFSLITNMCTMSYEEEEEHCHDSIVGVG 329


>AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease
           protein.
          Length = 435

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +3

Query: 102 GPCMSHQ*CY-PNNKKNLYAVLHHSSAVLCRSLHIC 206
           G C  +Q C  P  K N+++VL H   V   S+ IC
Sbjct: 110 GHCTRYQSCKGPELKDNVWSVLQHLCIVEGISVGIC 145


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 470 NGSQRMQRFGRRSNNSHLCVLV 405
           N ++R   FGR +N    C++V
Sbjct: 549 NAARRAMSFGRTNNRDRRCLMV 570


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 291 AYQHNNVNQWTSAVVESCLGQ 229
           AY+HNN+NQ  +  + S  G+
Sbjct: 598 AYKHNNLNQSMACTIVSQGGE 618


>AY062203-1|AAL58564.1|  149|Anopheles gambiae cytochrome P450
           CYP4C25 protein.
          Length = 149

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 239 HDSTTAEVHWLTLL 280
           HD+T+A + W+ LL
Sbjct: 10  HDTTSAAISWILLL 23


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 425  YYYFFVQIVAFFDFHYFV 478
            YY  ++ I+AFF  + FV
Sbjct: 1101 YYIIYIIIIAFFMVNIFV 1118


>AJ439060-2|CAD27753.1|  135|Anopheles gambiae putative cytoskeletal
           regulator protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 48  ICQAQRLRQCST*FYSPNGPC 110
           +  +  L  C +  ++PNGPC
Sbjct: 112 VVNSYNLTTCPSWAHAPNGPC 132


>AJ438610-10|CAD27482.1|  135|Anopheles gambiae putative
           cytoskeletal regulator protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 48  ICQAQRLRQCST*FYSPNGPC 110
           +  +  L  C +  ++PNGPC
Sbjct: 112 VVNSYNLTTCPSWAHAPNGPC 132


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,610
Number of Sequences: 2352
Number of extensions: 10685
Number of successful extensions: 20
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42708759
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)