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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte11b18
         (817 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical pr...    31   1.3  
Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical pr...    31   1.3  
M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.ele...    31   1.3  
L15314-2|AAF99983.1|  322|Caenorhabditis elegans Hypothetical pr...    31   1.3  
U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein.       30   2.3  
U21732-1|AAA85853.1|  970|Caenorhabditis elegans UNC-44 protein.       30   2.3  
U21731-1|AAA85852.1|  985|Caenorhabditis elegans UNC-44 protein.       30   2.3  
U50071-8|AAV34806.1|  795|Caenorhabditis elegans Uncoordinated p...    29   3.0  
U50071-7|AAV34805.1|  905|Caenorhabditis elegans Uncoordinated p...    29   3.0  
U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated p...    29   3.0  
U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated p...    29   3.0  
U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated p...    29   3.0  
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p...    29   3.0  
U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin pr...    29   3.0  
U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin pr...    29   3.0  
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr...    29   3.0  
Z81521-1|CAB04226.1|  319|Caenorhabditis elegans Hypothetical pr...    29   4.0  
AY643539-1|AAT66915.1|  566|Caenorhabditis elegans ERM-1C protein.     28   7.0  
AB107270-2|BAC98357.1|  566|Caenorhabditis elegans ERM-1Asv prot...    28   7.0  
Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical pr...    28   9.2  

>Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical protein
            F02A9.6 protein.
          Length = 1295

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
 Frame = -2

Query: 579  PARSLQENKESSQIIFPFAQSVTKAIKQENVDHDKGMA---NFLHPIPETKSGAEDVPAG 409
            P RS +    ++ +  P  +S  +  ++   +H    +   N  +  P TK    D   G
Sbjct: 790  PERSRKRKMVNATVWMPPMESTNEKGRRNQSNHSSQCSLLDNSAYYHPNTKRHCSDYSTG 849

Query: 408  MRLHGTR-ARLYTSVLAGASTEQTEEIAVNDYDAT-VPEDLPDDEVPLN 268
               +G + +++Y   LA        E+  +    T  P DLP DE+PL+
Sbjct: 850  Y--NGEQYSQIYPQTLANGYPGDYNELNFDFQSETFAPADLPADEIPLH 896


>Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical protein
            F02A9.6 protein.
          Length = 1295

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
 Frame = -2

Query: 579  PARSLQENKESSQIIFPFAQSVTKAIKQENVDHDKGMA---NFLHPIPETKSGAEDVPAG 409
            P RS +    ++ +  P  +S  +  ++   +H    +   N  +  P TK    D   G
Sbjct: 790  PERSRKRKMVNATVWMPPMESTNEKGRRNQSNHSSQCSLLDNSAYYHPNTKRHCSDYSTG 849

Query: 408  MRLHGTR-ARLYTSVLAGASTEQTEEIAVNDYDAT-VPEDLPDDEVPLN 268
               +G + +++Y   LA        E+  +    T  P DLP DE+PL+
Sbjct: 850  Y--NGEQYSQIYPQTLANGYPGDYNELNFDFQSETFAPADLPADEIPLH 896


>M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.elegans
            glp-1 gene,complete cds. ).
          Length = 1295

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
 Frame = -2

Query: 579  PARSLQENKESSQIIFPFAQSVTKAIKQENVDHDKGMA---NFLHPIPETKSGAEDVPAG 409
            P RS +    ++ +  P  +S  +  ++   +H    +   N  +  P TK    D   G
Sbjct: 790  PERSRKRKMVNATVWMPPMESTNEKGRRNQSNHSSQCSLLDNSAYYHPNTKRHCSDYSTG 849

Query: 408  MRLHGTR-ARLYTSVLAGASTEQTEEIAVNDYDAT-VPEDLPDDEVPLN 268
               +G + +++Y   LA        E+  +    T  P DLP DE+PL+
Sbjct: 850  Y--NGEQYSQIYPQTLANGYPGDYNELNFDFQSETFAPADLPADEIPLH 896


>L15314-2|AAF99983.1|  322|Caenorhabditis elegans Hypothetical
           protein K06H7.7 protein.
          Length = 322

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 18/70 (25%), Positives = 34/70 (48%)
 Frame = -2

Query: 309 TVPEDLPDDEVPLNEELQIILPPRCDDVTAESSVTKTG*RKMNSKSIAIQHKLIDEVYT* 130
           TVP DL D  +P +E++QI +    DD+  E  ++    R  N   +    +  +++Y  
Sbjct: 198 TVPLDLSDIPIPCSEDIQIHVSFLADDL-LERHISSNVNRSSNRDDLDFSRRTCEKMYDL 256

Query: 129 HVEVKGAQES 100
           + ++   Q S
Sbjct: 257 YQKMMRGQSS 266


>U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein.
          Length = 1786

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
 Frame = -2

Query: 645  VPYLRRMKPDELELLFRGYADLPARSLQENK-ESSQIIFPFAQSVTKAIKQEN--VDHDK 475
            + Y +   P +     R + ++PA +L + +  +  ++       T  ++Q    V    
Sbjct: 1589 INYSQADSPSQKRDAIRHFEEVPAATLVKREVRTEDLVTREPVQPTHHVEQATTVVQEPS 1648

Query: 474  GMANFLH-PIPETKSGAEDVP-AGMR-LHGTRARLYTSVLAGASTEQTEEIAVNDYDATV 304
              A   H P+PE     E+ P A MR +  T   ++ S       E+T      D D  V
Sbjct: 1649 YSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTITTTYED-DVAV 1707

Query: 303  PEDLPDDEVPLNEELQ 256
             E++ D  VPLNE+ Q
Sbjct: 1708 NENIVDRTVPLNEDEQ 1723


>U21732-1|AAA85853.1|  970|Caenorhabditis elegans UNC-44 protein.
          Length = 970

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
 Frame = -2

Query: 645  VPYLRRMKPDELELLFRGYADLPARSLQENK-ESSQIIFPFAQSVTKAIKQEN--VDHDK 475
            + Y +   P +     R + ++PA +L + +  +  ++       T  ++Q    V    
Sbjct: 686  INYSQADSPSQKRDAIRHFEEVPAATLVKREVRTEDLVTREPVQPTHHVEQATTVVQEPS 745

Query: 474  GMANFLH-PIPETKSGAEDVP-AGMR-LHGTRARLYTSVLAGASTEQTEEIAVNDYDATV 304
              A   H P+PE     E+ P A MR +  T   ++ S       E+T      D D  V
Sbjct: 746  YSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTITTTYED-DVAV 804

Query: 303  PEDLPDDEVPLNEELQ 256
             E++ D  VPLNE+ Q
Sbjct: 805  NENIVDRTVPLNEDEQ 820


>U21731-1|AAA85852.1|  985|Caenorhabditis elegans UNC-44 protein.
          Length = 985

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
 Frame = -2

Query: 645  VPYLRRMKPDELELLFRGYADLPARSLQENK-ESSQIIFPFAQSVTKAIKQEN--VDHDK 475
            + Y +   P +     R + ++PA +L + +  +  ++       T  ++Q    V    
Sbjct: 759  INYSQADSPSQKRDAIRHFEEVPAATLVKREVRTEDLVTREPVQPTHHVEQATTVVQEPS 818

Query: 474  GMANFLH-PIPETKSGAEDVP-AGMR-LHGTRARLYTSVLAGASTEQTEEIAVNDYDATV 304
              A   H P+PE     E+ P A MR +  T   ++ S       E+T      D D  V
Sbjct: 819  YSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTITTTYED-DVAV 877

Query: 303  PEDLPDDEVPLNEELQ 256
             E++ D  VPLNE+ Q
Sbjct: 878  NENIVDRTVPLNEDEQ 893


>U50071-8|AAV34806.1|  795|Caenorhabditis elegans Uncoordinated
           protein 44, isoform d protein.
          Length = 795

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
 Frame = -2

Query: 645 VPYLRRMKPDELELLFRGYADLPARSLQENK-ESSQIIFPFAQSVTKAIKQEN--VDHDK 475
           + Y +   P +     R + ++PA +L + +  +  ++       T  ++Q    V    
Sbjct: 569 INYSQADSPSQKREPIRHFEEVPAATLVKREVRTEDLVTREPVQPTHHVEQATTVVQEPS 628

Query: 474 GMANFLH-PIPETKSGAEDVP-AGMR-LHGTRARLYTSVLAGASTEQTEEIAVNDYDATV 304
             A   H P+PE     E+ P A MR +  T   ++ S       E+T      D D  V
Sbjct: 629 YSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTITTTYED-DVAV 687

Query: 303 PEDLPDDEVPLNEELQ 256
            E++ D  VPLNE+ Q
Sbjct: 688 NENIVDRTVPLNEDEQ 703


>U50071-7|AAV34805.1|  905|Caenorhabditis elegans Uncoordinated
            protein 44, isoform b protein.
          Length = 905

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
 Frame = -2

Query: 645  VPYLRRMKPDELELLFRGYADLPARSLQENK-ESSQIIFPFAQSVTKAIKQEN--VDHDK 475
            + Y +   P +     R + ++PA +L + +  +  ++       T  ++Q    V    
Sbjct: 679  INYSQADSPSQKREPIRHFEEVPAATLVKREVRTEDLVTREPVQPTHHVEQATTVVQEPS 738

Query: 474  GMANFLH-PIPETKSGAEDVP-AGMR-LHGTRARLYTSVLAGASTEQTEEIAVNDYDATV 304
              A   H P+PE     E+ P A MR +  T   ++ S       E+T      D D  V
Sbjct: 739  YSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTITTTYED-DVAV 797

Query: 303  PEDLPDDEVPLNEELQ 256
             E++ D  VPLNE+ Q
Sbjct: 798  NENIVDRTVPLNEDEQ 813


>U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated
            protein 44, isoform a protein.
          Length = 2039

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
 Frame = -2

Query: 645  VPYLRRMKPDELELLFRGYADLPARSLQENK-ESSQIIFPFAQSVTKAIKQEN--VDHDK 475
            + Y +   P +     R + ++PA +L + +  +  ++       T  ++Q    V    
Sbjct: 1583 INYSQADSPSQKREPIRHFEEVPAATLVKREVRTEDLVTREPVQPTHHVEQATTVVQEPS 1642

Query: 474  GMANFLH-PIPETKSGAEDVP-AGMR-LHGTRARLYTSVLAGASTEQTEEIAVNDYDATV 304
              A   H P+PE     E+ P A MR +  T   ++ S       E+T      D D  V
Sbjct: 1643 YSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTITTTYED-DVAV 1701

Query: 303  PEDLPDDEVPLNEELQ 256
             E++ D  VPLNE+ Q
Sbjct: 1702 NENIVDRTVPLNEDEQ 1717


>U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated
            protein 44, isoform e protein.
          Length = 1841

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
 Frame = -2

Query: 645  VPYLRRMKPDELELLFRGYADLPARSLQENK-ESSQIIFPFAQSVTKAIKQEN--VDHDK 475
            + Y +   P +     R + ++PA +L + +  +  ++       T  ++Q    V    
Sbjct: 1583 INYSQADSPSQKREPIRHFEEVPAATLVKREVRTEDLVTREPVQPTHHVEQATTVVQEPS 1642

Query: 474  GMANFLH-PIPETKSGAEDVP-AGMR-LHGTRARLYTSVLAGASTEQTEEIAVNDYDATV 304
              A   H P+PE     E+ P A MR +  T   ++ S       E+T      D D  V
Sbjct: 1643 YSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTITTTYED-DVAV 1701

Query: 303  PEDLPDDEVPLNEELQ 256
             E++ D  VPLNE+ Q
Sbjct: 1702 NENIVDRTVPLNEDEQ 1717


>U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated
            protein 44, isoform c protein.
          Length = 1867

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
 Frame = -2

Query: 645  VPYLRRMKPDELELLFRGYADLPARSLQENK-ESSQIIFPFAQSVTKAIKQEN--VDHDK 475
            + Y +   P +     R + ++PA +L + +  +  ++       T  ++Q    V    
Sbjct: 1583 INYSQADSPSQKREPIRHFEEVPAATLVKREVRTEDLVTREPVQPTHHVEQATTVVQEPS 1642

Query: 474  GMANFLH-PIPETKSGAEDVP-AGMR-LHGTRARLYTSVLAGASTEQTEEIAVNDYDATV 304
              A   H P+PE     E+ P A MR +  T   ++ S       E+T      D D  V
Sbjct: 1643 YSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTITTTYED-DVAV 1701

Query: 303  PEDLPDDEVPLNEELQ 256
             E++ D  VPLNE+ Q
Sbjct: 1702 NENIVDRTVPLNEDEQ 1717


>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
            protein 44, isoform f protein.
          Length = 6994

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
 Frame = -2

Query: 645  VPYLRRMKPDELELLFRGYADLPARSLQENK-ESSQIIFPFAQSVTKAIKQEN--VDHDK 475
            + Y +   P +     R + ++PA +L + +  +  ++       T  ++Q    V    
Sbjct: 1589 INYSQADSPSQKREPIRHFEEVPAATLVKREVRTEDLVTREPVQPTHHVEQATTVVQEPS 1648

Query: 474  GMANFLH-PIPETKSGAEDVP-AGMR-LHGTRARLYTSVLAGASTEQTEEIAVNDYDATV 304
              A   H P+PE     E+ P A MR +  T   ++ S       E+T      D D  V
Sbjct: 1649 YSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTITTTYED-DVAV 1707

Query: 303  PEDLPDDEVPLNEELQ 256
             E++ D  VPLNE+ Q
Sbjct: 1708 NENIVDRTVPLNEDEQ 1723


>U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin
            protein.
          Length = 1815

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
 Frame = -2

Query: 645  VPYLRRMKPDELELLFRGYADLPARSLQENK-ESSQIIFPFAQSVTKAIKQEN--VDHDK 475
            + Y +   P +     R + ++PA +L + +  +  ++       T  ++Q    V    
Sbjct: 1589 INYSQADSPSQKREPIRHFEEVPAATLVKREVRTEDLVTREPVQPTHHVEQATTVVQEPS 1648

Query: 474  GMANFLH-PIPETKSGAEDVP-AGMR-LHGTRARLYTSVLAGASTEQTEEIAVNDYDATV 304
              A   H P+PE     E+ P A MR +  T   ++ S       E+T      D D  V
Sbjct: 1649 YSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTITTTYED-DVAV 1707

Query: 303  PEDLPDDEVPLNEELQ 256
             E++ D  VPLNE+ Q
Sbjct: 1708 NENIVDRTVPLNEDEQ 1723


>U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin
            protein.
          Length = 1867

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
 Frame = -2

Query: 645  VPYLRRMKPDELELLFRGYADLPARSLQENK-ESSQIIFPFAQSVTKAIKQEN--VDHDK 475
            + Y +   P +     R + ++PA +L + +  +  ++       T  ++Q    V    
Sbjct: 1583 INYSQADSPSQKREPIRHFEEVPAATLVKREVRTEDLVTREPVQPTHHVEQATTVVQEPS 1642

Query: 474  GMANFLH-PIPETKSGAEDVP-AGMR-LHGTRARLYTSVLAGASTEQTEEIAVNDYDATV 304
              A   H P+PE     E+ P A MR +  T   ++ S       E+T      D D  V
Sbjct: 1643 YSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTITTTYED-DVAV 1701

Query: 303  PEDLPDDEVPLNEELQ 256
             E++ D  VPLNE+ Q
Sbjct: 1702 NENIVDRTVPLNEDEQ 1717


>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
            protein.
          Length = 6994

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
 Frame = -2

Query: 645  VPYLRRMKPDELELLFRGYADLPARSLQENK-ESSQIIFPFAQSVTKAIKQEN--VDHDK 475
            + Y +   P +     R + ++PA +L + +  +  ++       T  ++Q    V    
Sbjct: 1589 INYSQADSPSQKREPIRHFEEVPAATLVKREVRTEDLVTREPVQPTHHVEQATTVVQEPS 1648

Query: 474  GMANFLH-PIPETKSGAEDVP-AGMR-LHGTRARLYTSVLAGASTEQTEEIAVNDYDATV 304
              A   H P+PE     E+ P A MR +  T   ++ S       E+T      D D  V
Sbjct: 1649 YSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTITTTYED-DVAV 1707

Query: 303  PEDLPDDEVPLNEELQ 256
             E++ D  VPLNE+ Q
Sbjct: 1708 NENIVDRTVPLNEDEQ 1723


>Z81521-1|CAB04226.1|  319|Caenorhabditis elegans Hypothetical
           protein F32A11.1 protein.
          Length = 319

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 14/48 (29%), Positives = 29/48 (60%)
 Frame = -2

Query: 612 LELLFRGYADLPARSLQENKESSQIIFPFAQSVTKAIKQENVDHDKGM 469
           LE++ RGYA +PA    ++ +S Q I  +++ +++ +  E V   +G+
Sbjct: 181 LEVVRRGYARVPAPDQVKHLKSLQTIPAYSRLISRLLMSEKVADRRGV 228


>AY643539-1|AAT66915.1|  566|Caenorhabditis elegans ERM-1C protein.
          Length = 566

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 25/101 (24%), Positives = 40/101 (39%)
 Frame = -2

Query: 639 YLRRMKPDELELLFRGYADLPARSLQENKESSQIIFPFAQSVTKAIKQENVDHDKGMANF 460
           Y+RR KPD +E+          R+L+  ++          S  +  +Q   D +K MA  
Sbjct: 292 YMRRRKPDTIEVQQMKQQAREDRALKIAEQEKLTRIVQEMSAREEAEQRQRDAEKRMAQM 351

Query: 459 LHPIPETKSGAEDVPAGMRLHGTRARLYTSVLAGASTEQTE 337
              +   +   E   A   +H   A+L    LA  + EQ E
Sbjct: 352 QEDMERAR--LELAEAHNTIHSLEAQLKQLQLAKQALEQKE 390


>AB107270-2|BAC98357.1|  566|Caenorhabditis elegans ERM-1Asv
           protein.
          Length = 566

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 25/101 (24%), Positives = 40/101 (39%)
 Frame = -2

Query: 639 YLRRMKPDELELLFRGYADLPARSLQENKESSQIIFPFAQSVTKAIKQENVDHDKGMANF 460
           Y+RR KPD +E+          R+L+  ++          S  +  +Q   D +K MA  
Sbjct: 292 YMRRRKPDTIEVQQMKQQAREDRALKIAEQEKLTRIVQEMSAREEAEQRQRDAEKRMAQM 351

Query: 459 LHPIPETKSGAEDVPAGMRLHGTRARLYTSVLAGASTEQTE 337
              +   +   E   A   +H   A+L    LA  + EQ E
Sbjct: 352 QEDMERAR--LELAEAHNTIHSLEAQLKQLQLAKQALEQKE 390


>Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical
           protein W02B8.2 protein.
          Length = 1256

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -2

Query: 561 ENKESSQIIFPFAQSVTKAIKQENVDHDKGMANFLHPIPETK 436
           +NK+  QI+    Q+ +K + +ENV   KGMA  +  I E K
Sbjct: 550 DNKKLQQILEEVRQNQSKVL-EENVKLRKGMAEAIEKIEEFK 590


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,760,507
Number of Sequences: 27780
Number of extensions: 397654
Number of successful extensions: 1102
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1102
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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