Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte11b15
         (545 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022196-1|AAY51590.1|  101|Drosophila melanogaster IP01143p pro...    79   3e-15
AF173295-1|AAF89806.1|  101|Drosophila melanogaster enhancer of ...    79   3e-15
AF173294-1|AAF89805.1|  101|Drosophila melanogaster enhancer of ...    79   3e-15
AE014298-1642|AAF48062.1|  101|Drosophila melanogaster CG15191-P...    79   3e-15
BT023702-1|AAY85102.1|  123|Drosophila melanogaster IP03279p pro...    52   4e-07
AE014297-555|AAF54066.1|   95|Drosophila melanogaster CG14612-PA...    52   4e-07
AY071313-1|AAL48935.1|  663|Drosophila melanogaster RE33814p pro...    28   9.5  
AE014298-2597|AAF48752.2|  663|Drosophila melanogaster CG12990-P...    28   9.5  

>BT022196-1|AAY51590.1|  101|Drosophila melanogaster IP01143p
           protein.
          Length = 101

 Score = 79.4 bits (187), Expect = 3e-15
 Identities = 39/85 (45%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
 Frame = -3

Query: 351 QRLILSGDXXXXXXXXXXXXXECGWRDQVRMLCRDIVKENESGN-ITFDSLVTKVTPRAR 175
           Q  +L+GD             ECGWRD+VR++CR+I+ E  + N  T + L+ +VTP+AR
Sbjct: 9   QYTVLTGDRSKIKDLLCSRLTECGWRDEVRLMCRNILMEKGTNNSFTVEQLIAEVTPKAR 68

Query: 174 ALVPDSVKKELLQKIKTHLLTQKDQ 100
            LVPD+VKKELL KI+T +LT+ ++
Sbjct: 69  TLVPDAVKKELLMKIRT-ILTEIEE 92


>AF173295-1|AAF89806.1|  101|Drosophila melanogaster enhancer of
           yellow 2 transcriptionfactor protein.
          Length = 101

 Score = 79.4 bits (187), Expect = 3e-15
 Identities = 39/85 (45%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
 Frame = -3

Query: 351 QRLILSGDXXXXXXXXXXXXXECGWRDQVRMLCRDIVKENESGN-ITFDSLVTKVTPRAR 175
           Q  +L+GD             ECGWRD+VR++CR+I+ E  + N  T + L+ +VTP+AR
Sbjct: 9   QYTVLTGDRSKIKDLLCSRLTECGWRDEVRLMCRNILMEKGTNNSFTVEQLIAEVTPKAR 68

Query: 174 ALVPDSVKKELLQKIKTHLLTQKDQ 100
            LVPD+VKKELL KI+T +LT+ ++
Sbjct: 69  TLVPDAVKKELLMKIRT-ILTEIEE 92


>AF173294-1|AAF89805.1|  101|Drosophila melanogaster enhancer of
           yellow 2 transcriptionfactor protein.
          Length = 101

 Score = 79.4 bits (187), Expect = 3e-15
 Identities = 39/85 (45%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
 Frame = -3

Query: 351 QRLILSGDXXXXXXXXXXXXXECGWRDQVRMLCRDIVKENESGN-ITFDSLVTKVTPRAR 175
           Q  +L+GD             ECGWRD+VR++CR+I+ E  + N  T + L+ +VTP+AR
Sbjct: 9   QYTVLTGDRSKIKDLLCSRLTECGWRDEVRLMCRNILMEKGTNNSFTVEQLIAEVTPKAR 68

Query: 174 ALVPDSVKKELLQKIKTHLLTQKDQ 100
            LVPD+VKKELL KI+T +LT+ ++
Sbjct: 69  TLVPDAVKKELLMKIRT-ILTEIEE 92


>AE014298-1642|AAF48062.1|  101|Drosophila melanogaster CG15191-PA
           protein.
          Length = 101

 Score = 79.4 bits (187), Expect = 3e-15
 Identities = 39/85 (45%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
 Frame = -3

Query: 351 QRLILSGDXXXXXXXXXXXXXECGWRDQVRMLCRDIVKENESGN-ITFDSLVTKVTPRAR 175
           Q  +L+GD             ECGWRD+VR++CR+I+ E  + N  T + L+ +VTP+AR
Sbjct: 9   QYTVLTGDRSKIKDLLCSRLTECGWRDEVRLMCRNILMEKGTNNSFTVEQLIAEVTPKAR 68

Query: 174 ALVPDSVKKELLQKIKTHLLTQKDQ 100
            LVPD+VKKELL KI+T +LT+ ++
Sbjct: 69  TLVPDAVKKELLMKIRT-ILTEIEE 92


>BT023702-1|AAY85102.1|  123|Drosophila melanogaster IP03279p
           protein.
          Length = 123

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 21/56 (37%), Positives = 34/56 (60%)
 Frame = -3

Query: 285 CGWRDQVRMLCRDIVKENESGNITFDSLVTKVTPRARALVPDSVKKELLQKIKTHL 118
           CGW   ++ + R+I+ E    NI  D L  ++ P+ARALVP+ VK E++ ++   L
Sbjct: 66  CGWHKDIKEMIRNIIMERGVDNINRDQLAAQIVPQARALVPEVVKNEMMLRVHAAL 121


>AE014297-555|AAF54066.1|   95|Drosophila melanogaster CG14612-PA
           protein.
          Length = 95

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 21/56 (37%), Positives = 34/56 (60%)
 Frame = -3

Query: 285 CGWRDQVRMLCRDIVKENESGNITFDSLVTKVTPRARALVPDSVKKELLQKIKTHL 118
           CGW   ++ + R+I+ E    NI  D L  ++ P+ARALVP+ VK E++ ++   L
Sbjct: 38  CGWHKDIKEMIRNIIMERGVDNINRDQLAAQIVPQARALVPEVVKNEMMLRVHAAL 93


>AY071313-1|AAL48935.1|  663|Drosophila melanogaster RE33814p
           protein.
          Length = 663

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
 Frame = -2

Query: 115 HTERPIKIK---SLLNLCCAIFNIIFRLKSGLGINFEQL 8
           HT+ P  +K    LL +  A+F+I+F   + +G NFE++
Sbjct: 426 HTKHPNMVKWIVRLLVVISALFSIVFMEVNEVGANFEEM 464


>AE014298-2597|AAF48752.2|  663|Drosophila melanogaster CG12990-PA
           protein.
          Length = 663

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
 Frame = -2

Query: 115 HTERPIKIK---SLLNLCCAIFNIIFRLKSGLGINFEQL 8
           HT+ P  +K    LL +  A+F+I+F   + +G NFE++
Sbjct: 426 HTKHPNMVKWIVRLLVVISALFSIVFMEVNEVGANFEEM 464


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,264,922
Number of Sequences: 53049
Number of extensions: 385523
Number of successful extensions: 740
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2069139900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)