Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11b14
(842 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003247-1|AAO25004.1| 194|Drosophila melanogaster LD34406p pro... 221 7e-58
AE014297-1289|AAF54630.1| 194|Drosophila melanogaster CG6719-PA... 221 7e-58
AY070815-1|AAL48437.1| 182|Drosophila melanogaster AT24358p pro... 82 8e-16
AE013599-3253|AAF46750.2| 182|Drosophila melanogaster CG15676-P... 82 8e-16
AY060374-1|AAL25413.1| 464|Drosophila melanogaster LD24627p pro... 35 0.16
AE014297-3468|AAN13983.1| 464|Drosophila melanogaster CG31133-P... 35 0.16
U35816-4|AAB09051.1| 1972|Drosophila melanogaster nonmuscle myos... 30 3.5
U35816-3|AAB09050.1| 2012|Drosophila melanogaster nonmuscle myos... 30 3.5
U35816-2|AAB09048.1| 2017|Drosophila melanogaster nonmuscle myos... 30 3.5
U35816-1|AAB09049.1| 2057|Drosophila melanogaster nonmuscle myos... 30 3.5
M35012-1|AAA28713.1| 1972|Drosophila melanogaster protein ( D.me... 30 3.5
AE013599-4011|AAM70805.1| 2011|Drosophila melanogaster CG15792-P... 30 3.5
AE013599-4010|AAX52688.1| 1971|Drosophila melanogaster CG15792-P... 30 3.5
AE013599-4009|AAF47311.1| 2056|Drosophila melanogaster CG15792-P... 30 3.5
AE013599-4008|AAX52687.1| 2016|Drosophila melanogaster CG15792-P... 30 3.5
BT029268-1|ABK30905.1| 461|Drosophila melanogaster IP07471p pro... 29 6.0
AY118638-1|AAM50007.1| 1775|Drosophila melanogaster SD02391p pro... 29 6.0
AF315343-1|AAG29564.1| 408|Drosophila melanogaster tumor suppre... 29 6.0
AF181654-1|AAD55439.1| 652|Drosophila melanogaster BcDNA.LD2383... 29 6.0
AE014298-586|AAF45910.1| 2779|Drosophila melanogaster CG6450-PC ... 29 6.0
AE014296-2808|AAF49406.2| 408|Drosophila melanogaster CG9712-PA... 29 6.0
AE013599-854|AAF58945.1| 652|Drosophila melanogaster CG8801-PA ... 29 6.0
AY058607-1|AAL13836.1| 999|Drosophila melanogaster LD30037p pro... 29 8.0
AF159852-1|AAD54965.1| 999|Drosophila melanogaster RNA-binding ... 29 8.0
AF132213-1|AAF61321.1| 999|Drosophila melanogaster smaug protei... 29 8.0
AE014296-1566|AAN11981.1| 999|Drosophila melanogaster CG5263-PC... 29 8.0
AE014296-1565|AAF50334.3| 999|Drosophila melanogaster CG5263-PB... 29 8.0
AE014296-1564|AAF50333.3| 999|Drosophila melanogaster CG5263-PA... 29 8.0
>BT003247-1|AAO25004.1| 194|Drosophila melanogaster LD34406p
protein.
Length = 194
Score = 221 bits (541), Expect = 7e-58
Identities = 106/179 (59%), Positives = 134/179 (74%)
Frame = -2
Query: 685 PSNPKSYSGIPEAEFVDNVDEFMKSPINAEGVDVVLKSLDEKHRKYKVMEYTLATKRRRL 506
P N K+++GIPEA F++ +D FM P N E + VL+ LDE+H KY+ M L +RR+L
Sbjct: 14 PENQKTFAGIPEAVFLEEIDTFMSQPEN-ENCEKVLQRLDEQHGKYRFMACNLEARRRKL 72
Query: 505 RQQIPDLARTIEVIEKLKEQKEEVETQFLLSDQVFVKANVPPTKSVCLWLGANVMLEYSL 326
+ QIPDL R++E++ L+++ EE ETQFLLSDQVF+K VPPTK+V LWLGA+VMLEY L
Sbjct: 73 KSQIPDLERSLEMVNVLRKEDEERETQFLLSDQVFIKTLVPPTKTVYLWLGASVMLEYPL 132
Query: 325 EDAEKLLTTNMETAQENLNQVEHDLDFLRDQCTTTEVNMARVYNWDVKKRQAASGRITT 149
++AE LL N+ +A NL VEHD DFLRDQ TTTEVNMARVYNW VKKRQAA+ T
Sbjct: 133 DEAEALLNQNITSAVGNLKSVEHDQDFLRDQITTTEVNMARVYNWGVKKRQAATKTTAT 191
>AE014297-1289|AAF54630.1| 194|Drosophila melanogaster CG6719-PA
protein.
Length = 194
Score = 221 bits (541), Expect = 7e-58
Identities = 106/179 (59%), Positives = 134/179 (74%)
Frame = -2
Query: 685 PSNPKSYSGIPEAEFVDNVDEFMKSPINAEGVDVVLKSLDEKHRKYKVMEYTLATKRRRL 506
P N K+++GIPEA F++ +D FM P N E + VL+ LDE+H KY+ M L +RR+L
Sbjct: 14 PENQKTFAGIPEAVFLEEIDTFMSQPEN-ENCEKVLQRLDEQHGKYRFMACNLEARRRKL 72
Query: 505 RQQIPDLARTIEVIEKLKEQKEEVETQFLLSDQVFVKANVPPTKSVCLWLGANVMLEYSL 326
+ QIPDL R++E++ L+++ EE ETQFLLSDQVF+K VPPTK+V LWLGA+VMLEY L
Sbjct: 73 KSQIPDLERSLEMVNVLRKEDEERETQFLLSDQVFIKTLVPPTKTVYLWLGASVMLEYPL 132
Query: 325 EDAEKLLTTNMETAQENLNQVEHDLDFLRDQCTTTEVNMARVYNWDVKKRQAASGRITT 149
++AE LL N+ +A NL VEHD DFLRDQ TTTEVNMARVYNW VKKRQAA+ T
Sbjct: 133 DEAEALLNQNITSAVGNLKSVEHDQDFLRDQITTTEVNMARVYNWGVKKRQAATKTTAT 191
>AY070815-1|AAL48437.1| 182|Drosophila melanogaster AT24358p
protein.
Length = 182
Score = 82.2 bits (194), Expect = 8e-16
Identities = 45/165 (27%), Positives = 88/165 (53%), Gaps = 1/165 (0%)
Frame = -2
Query: 673 KSYSGIPEAEFVDNVDEFMKSPINAEGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQI 494
KS+ IPEA+ VD+V ++ P V LK + +Y + L T + ++
Sbjct: 17 KSFMPIPEAKLVDDVVSYIAKPEFYSTVPAALKMQRLFYVQYSELAAKLETDLTAVLTRL 76
Query: 493 PDLARTIEVIEKLKEQKE-EVETQFLLSDQVFVKANVPPTKSVCLWLGANVMLEYSLEDA 317
+E++ + + + EV + ++ VF ++PP + V L +GA++ +E+ L +A
Sbjct: 77 EAAKNNLELVRRFIDNPDKEVHSLVQIAQGVFRWVSIPPVQKVTLQVGASLQMEFELSEA 136
Query: 316 EKLLTTNMETAQENLNQVEHDLDFLRDQCTTTEVNMARVYNWDVK 182
E+ + ++ + + Q EHD+D+L+DQ T E+N+A +Y +V+
Sbjct: 137 EEFIKKDITSLVKQQLQHEHDIDYLQDQVNTIEMNLAVLYKHEVE 181
>AE013599-3253|AAF46750.2| 182|Drosophila melanogaster CG15676-PA
protein.
Length = 182
Score = 82.2 bits (194), Expect = 8e-16
Identities = 45/165 (27%), Positives = 88/165 (53%), Gaps = 1/165 (0%)
Frame = -2
Query: 673 KSYSGIPEAEFVDNVDEFMKSPINAEGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQI 494
KS+ IPEA+ VD+V ++ P V LK + +Y + L T + ++
Sbjct: 17 KSFMPIPEAKLVDDVVSYIAKPEFYSTVPAALKMQRLFYVQYSELAAKLETDLTAVLTRL 76
Query: 493 PDLARTIEVIEKLKEQKE-EVETQFLLSDQVFVKANVPPTKSVCLWLGANVMLEYSLEDA 317
+E++ + + + EV + ++ VF ++PP + V L +GA++ +E+ L +A
Sbjct: 77 EAAKNNLELVRRFIDNPDKEVHSLVQIAQGVFRWVSIPPVQKVTLQVGASLQMEFELSEA 136
Query: 316 EKLLTTNMETAQENLNQVEHDLDFLRDQCTTTEVNMARVYNWDVK 182
E+ + ++ + + Q EHD+D+L+DQ T E+N+A +Y +V+
Sbjct: 137 EEFIKKDITSLVKQQLQHEHDIDYLQDQVNTIEMNLAVLYKHEVE 181
>AY060374-1|AAL25413.1| 464|Drosophila melanogaster LD24627p
protein.
Length = 464
Score = 34.7 bits (76), Expect = 0.16
Identities = 18/65 (27%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Frame = -2
Query: 625 EFMKSPINAEGVDVVLKSLDEKHRKYKVMEYTL---ATKRRRLRQQIPDLARTIEVIEKL 455
+F++ I++ G+D+ L+++ K+ KYK L A +R R+ +++ +L ++ +L
Sbjct: 53 QFLEQSISSRGLDIRLETVLSKYEKYKTHHAQLSKVAEERERVTKRLKELTKSGSSAVQL 112
Query: 454 KEQKE 440
+E KE
Sbjct: 113 EELKE 117
>AE014297-3468|AAN13983.1| 464|Drosophila melanogaster CG31133-PA
protein.
Length = 464
Score = 34.7 bits (76), Expect = 0.16
Identities = 18/65 (27%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Frame = -2
Query: 625 EFMKSPINAEGVDVVLKSLDEKHRKYKVMEYTL---ATKRRRLRQQIPDLARTIEVIEKL 455
+F++ I++ G+D+ L+++ K+ KYK L A +R R+ +++ +L ++ +L
Sbjct: 53 QFLEQSISSRGLDIRLETVLSKYEKYKTHHAQLSKVAEERERVTKRLKELTKSGSSAVQL 112
Query: 454 KEQKE 440
+E KE
Sbjct: 113 EELKE 117
>U35816-4|AAB09051.1| 1972|Drosophila melanogaster nonmuscle myosin-II
heavy chain protein.
Length = 1972
Score = 30.3 bits (65), Expect = 3.5
Identities = 28/117 (23%), Positives = 52/117 (44%)
Frame = -2
Query: 598 EGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFL 419
E +D + K+ E RKY+ T +L+ +I A E +L +K+E+E
Sbjct: 865 EKLDTLAKNTQEYERKYQQALVEKTTLAEQLQAEIELCAEAEESRSRLMARKQELED--- 921
Query: 418 LSDQVFVKANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMETAQENLNQVEHDLD 248
+ ++ + + + L G LE +++D E+ L E A++ L + LD
Sbjct: 922 MMQELETRIEEEEERVLALG-GEKKKLELNIQDLEEQLEEE-EAARQKLQLEKVQLD 976
>U35816-3|AAB09050.1| 2012|Drosophila melanogaster nonmuscle myosin-II
heavy chain protein.
Length = 2012
Score = 30.3 bits (65), Expect = 3.5
Identities = 28/117 (23%), Positives = 52/117 (44%)
Frame = -2
Query: 598 EGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFL 419
E +D + K+ E RKY+ T +L+ +I A E +L +K+E+E
Sbjct: 905 EKLDTLAKNTQEYERKYQQALVEKTTLAEQLQAEIELCAEAEESRSRLMARKQELED--- 961
Query: 418 LSDQVFVKANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMETAQENLNQVEHDLD 248
+ ++ + + + L G LE +++D E+ L E A++ L + LD
Sbjct: 962 MMQELETRIEEEEERVLALG-GEKKKLELNIQDLEEQLEEE-EAARQKLQLEKVQLD 1016
>U35816-2|AAB09048.1| 2017|Drosophila melanogaster nonmuscle myosin-II
heavy chain protein.
Length = 2017
Score = 30.3 bits (65), Expect = 3.5
Identities = 28/117 (23%), Positives = 52/117 (44%)
Frame = -2
Query: 598 EGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFL 419
E +D + K+ E RKY+ T +L+ +I A E +L +K+E+E
Sbjct: 910 EKLDTLAKNTQEYERKYQQALVEKTTLAEQLQAEIELCAEAEESRSRLMARKQELED--- 966
Query: 418 LSDQVFVKANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMETAQENLNQVEHDLD 248
+ ++ + + + L G LE +++D E+ L E A++ L + LD
Sbjct: 967 MMQELETRIEEEEERVLALG-GEKKKLELNIQDLEEQLEEE-EAARQKLQLEKVQLD 1021
>U35816-1|AAB09049.1| 2057|Drosophila melanogaster nonmuscle myosin-II
heavy chain protein.
Length = 2057
Score = 30.3 bits (65), Expect = 3.5
Identities = 28/117 (23%), Positives = 52/117 (44%)
Frame = -2
Query: 598 EGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFL 419
E +D + K+ E RKY+ T +L+ +I A E +L +K+E+E
Sbjct: 950 EKLDTLAKNTQEYERKYQQALVEKTTLAEQLQAEIELCAEAEESRSRLMARKQELED--- 1006
Query: 418 LSDQVFVKANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMETAQENLNQVEHDLD 248
+ ++ + + + L G LE +++D E+ L E A++ L + LD
Sbjct: 1007 MMQELETRIEEEEERVLALG-GEKKKLELNIQDLEEQLEEE-EAARQKLQLEKVQLD 1061
>M35012-1|AAA28713.1| 1972|Drosophila melanogaster protein (
D.melanogaster non-musclemyosin heavy chain mRNA. ).
Length = 1972
Score = 30.3 bits (65), Expect = 3.5
Identities = 28/117 (23%), Positives = 52/117 (44%)
Frame = -2
Query: 598 EGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFL 419
E +D + K+ E RKY+ T +L+ +I A E +L +K+E+E
Sbjct: 865 EKLDTLAKNTQEYERKYQQALVEKTTLAEQLQAEIELCAEAEESRSRLMARKQELED--- 921
Query: 418 LSDQVFVKANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMETAQENLNQVEHDLD 248
+ ++ + + + L G LE +++D E+ L E A++ L + LD
Sbjct: 922 MMQELETRIEEEEERVLALG-GEKKKLELNIQDLEEQLEEE-EAARQKLQLEKVQLD 976
>AE013599-4011|AAM70805.1| 2011|Drosophila melanogaster CG15792-PB,
isoform B protein.
Length = 2011
Score = 30.3 bits (65), Expect = 3.5
Identities = 28/117 (23%), Positives = 52/117 (44%)
Frame = -2
Query: 598 EGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFL 419
E +D + K+ E RKY+ T +L+ +I A E +L +K+E+E
Sbjct: 904 EKLDTLAKNTQEYERKYQQALVEKTTLAEQLQAEIELCAEAEESRSRLMARKQELED--- 960
Query: 418 LSDQVFVKANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMETAQENLNQVEHDLD 248
+ ++ + + + L G LE +++D E+ L E A++ L + LD
Sbjct: 961 MMQELETRIEEEEERVLALG-GEKKKLELNIQDLEEQLEEE-EAARQKLQLEKVQLD 1015
>AE013599-4010|AAX52688.1| 1971|Drosophila melanogaster CG15792-PC,
isoform C protein.
Length = 1971
Score = 30.3 bits (65), Expect = 3.5
Identities = 28/117 (23%), Positives = 52/117 (44%)
Frame = -2
Query: 598 EGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFL 419
E +D + K+ E RKY+ T +L+ +I A E +L +K+E+E
Sbjct: 864 EKLDTLAKNTQEYERKYQQALVEKTTLAEQLQAEIELCAEAEESRSRLMARKQELED--- 920
Query: 418 LSDQVFVKANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMETAQENLNQVEHDLD 248
+ ++ + + + L G LE +++D E+ L E A++ L + LD
Sbjct: 921 MMQELETRIEEEEERVLALG-GEKKKLELNIQDLEEQLEEE-EAARQKLQLEKVQLD 975
>AE013599-4009|AAF47311.1| 2056|Drosophila melanogaster CG15792-PA,
isoform A protein.
Length = 2056
Score = 30.3 bits (65), Expect = 3.5
Identities = 28/117 (23%), Positives = 52/117 (44%)
Frame = -2
Query: 598 EGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFL 419
E +D + K+ E RKY+ T +L+ +I A E +L +K+E+E
Sbjct: 949 EKLDTLAKNTQEYERKYQQALVEKTTLAEQLQAEIELCAEAEESRSRLMARKQELED--- 1005
Query: 418 LSDQVFVKANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMETAQENLNQVEHDLD 248
+ ++ + + + L G LE +++D E+ L E A++ L + LD
Sbjct: 1006 MMQELETRIEEEEERVLALG-GEKKKLELNIQDLEEQLEEE-EAARQKLQLEKVQLD 1060
>AE013599-4008|AAX52687.1| 2016|Drosophila melanogaster CG15792-PD,
isoform D protein.
Length = 2016
Score = 30.3 bits (65), Expect = 3.5
Identities = 28/117 (23%), Positives = 52/117 (44%)
Frame = -2
Query: 598 EGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFL 419
E +D + K+ E RKY+ T +L+ +I A E +L +K+E+E
Sbjct: 909 EKLDTLAKNTQEYERKYQQALVEKTTLAEQLQAEIELCAEAEESRSRLMARKQELED--- 965
Query: 418 LSDQVFVKANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMETAQENLNQVEHDLD 248
+ ++ + + + L G LE +++D E+ L E A++ L + LD
Sbjct: 966 MMQELETRIEEEEERVLALG-GEKKKLELNIQDLEEQLEEE-EAARQKLQLEKVQLD 1020
>BT029268-1|ABK30905.1| 461|Drosophila melanogaster IP07471p
protein.
Length = 461
Score = 29.5 bits (63), Expect = 6.0
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Frame = -2
Query: 700 GDGVEPSNPKSYSGIPEAEFVDNVDEFMKSPINAEGVDV-VLKSLDEKHRKYKVMEYTLA 524
GD K+YS IPE E D + EF + A+ +D + L+E R+ + E +
Sbjct: 217 GDDYTLDLKKNYSEIPEEERYDIIPEFWQGHNIADYIDADIFDKLEELEREEGLREESGV 276
Query: 523 TKRRRLRQQIPDLARTIEVIEKLKEQKEEVE-TQFLLSDQ 407
K +PD+ E +++++E +++ +F L D+
Sbjct: 277 YK-------VPDMTMD-ETLKEIREIAKQIRGKRFELRDE 308
>AY118638-1|AAM50007.1| 1775|Drosophila melanogaster SD02391p
protein.
Length = 1775
Score = 29.5 bits (63), Expect = 6.0
Identities = 31/125 (24%), Positives = 54/125 (43%)
Frame = -2
Query: 577 KSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFLLSDQVFV 398
+ L EK +KY + L Q++ +L ++ ++L +QKEEVE + ++ D V
Sbjct: 73 RELREKLKKYALNLKKRTQDNADLEQKVQELTSQLQEQQELVKQKEEVEREPIV-DNHRV 131
Query: 397 KANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMETAQENLNQVEHDLDFLRDQCTTTE 218
+ + L A + L DA + L ++ QE L Q E D + + E
Sbjct: 132 EQLQQQVSKLNEDLKAKIHLNLENRDALRQLKQQIQ-EQEQLIQ-ERDAELQDANLVSKE 189
Query: 217 VNMAR 203
+ R
Sbjct: 190 LRRER 194
>AF315343-1|AAG29564.1| 408|Drosophila melanogaster tumor
suppressor protein 101 protein.
Length = 408
Score = 29.5 bits (63), Expect = 6.0
Identities = 19/97 (19%), Positives = 43/97 (44%)
Frame = -2
Query: 574 SLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFLLSDQVFVK 395
++ E+H K ++ RRR+++++ IE + + K++ E + + +
Sbjct: 241 TITEEHIKASIISAIDDKLRRRVQEKVNQYQAEIETLNRTKQELLEGSAKIDAIIERLER 300
Query: 394 ANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMETA 284
++ K++ + LE +LED E N + A
Sbjct: 301 EHIDMQKNISILKDKEQELEKALEDLESAEAINPDEA 337
>AF181654-1|AAD55439.1| 652|Drosophila melanogaster BcDNA.LD23830
protein.
Length = 652
Score = 29.5 bits (63), Expect = 6.0
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Frame = -2
Query: 700 GDGVEPSNPKSYSGIPEAEFVDNVDEFMKSPINAEGVDV-VLKSLDEKHRKYKVMEYTLA 524
GD K+YS IPE E D + EF + A+ +D + L+E R+ + E +
Sbjct: 408 GDDYTLDLKKNYSEIPEEERYDIIPEFWQGHNIADYIDADIFDKLEELEREEGLREESGV 467
Query: 523 TKRRRLRQQIPDLARTIEVIEKLKEQKEEVE-TQFLLSDQ 407
K +PD+ E +++++E +++ +F L D+
Sbjct: 468 YK-------VPDMTMD-ETLKEIREIAKQIRGKRFELRDE 499
>AE014298-586|AAF45910.1| 2779|Drosophila melanogaster CG6450-PC
protein.
Length = 2779
Score = 29.5 bits (63), Expect = 6.0
Identities = 31/125 (24%), Positives = 54/125 (43%)
Frame = -2
Query: 577 KSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFLLSDQVFV 398
+ L EK +KY + L Q++ +L ++ ++L +QKEEVE + ++ D V
Sbjct: 1077 RELREKLKKYALNLKKRTQDNADLEQKVQELTSQLQEQQELVKQKEEVEREPIV-DNHRV 1135
Query: 397 KANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMETAQENLNQVEHDLDFLRDQCTTTE 218
+ + L A + L DA + L ++ QE L Q E D + + E
Sbjct: 1136 EQLQQQVSKLNEDLKAKIHLNLENRDALRQLKQQIQ-EQEQLIQ-ERDAELQDANLVSKE 1193
Query: 217 VNMAR 203
+ R
Sbjct: 1194 LRRER 1198
>AE014296-2808|AAF49406.2| 408|Drosophila melanogaster CG9712-PA
protein.
Length = 408
Score = 29.5 bits (63), Expect = 6.0
Identities = 19/97 (19%), Positives = 43/97 (44%)
Frame = -2
Query: 574 SLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFLLSDQVFVK 395
++ E+H K ++ RRR+++++ IE + + K++ E + + +
Sbjct: 241 TITEEHIKASIISAIDDKLRRRVQEKVNQYQAEIETLNRTKQELLEGSAKIDAIIERLER 300
Query: 394 ANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMETA 284
++ K++ + LE +LED E N + A
Sbjct: 301 EHIDMQKNISILKDKEQELEKALEDLESAEAINPDEA 337
>AE013599-854|AAF58945.1| 652|Drosophila melanogaster CG8801-PA
protein.
Length = 652
Score = 29.5 bits (63), Expect = 6.0
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Frame = -2
Query: 700 GDGVEPSNPKSYSGIPEAEFVDNVDEFMKSPINAEGVDV-VLKSLDEKHRKYKVMEYTLA 524
GD K+YS IPE E D + EF + A+ +D + L+E R+ + E +
Sbjct: 408 GDDYTLDLKKNYSEIPEEERYDIIPEFWQGHNIADYIDADIFDKLEELEREEGLREESGV 467
Query: 523 TKRRRLRQQIPDLARTIEVIEKLKEQKEEVE-TQFLLSDQ 407
K +PD+ E +++++E +++ +F L D+
Sbjct: 468 YK-------VPDMTMD-ETLKEIREIAKQIRGKRFELRDE 499
>AY058607-1|AAL13836.1| 999|Drosophila melanogaster LD30037p
protein.
Length = 999
Score = 29.1 bits (62), Expect = 8.0
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +3
Query: 564 SSRLFKTTSTPSALIGDFINSSTLSTNSASGIPEYDLGFEGSTPSPSIFIYCE 722
S+ + TTSTP+A + +++T + A+G P + S PS ++F CE
Sbjct: 26 SNEMQPTTSTPTAAHKEATSTATTTATYANGNPNSNANPSQSQPSNALF--CE 76
>AF159852-1|AAD54965.1| 999|Drosophila melanogaster RNA-binding
protein Smaug protein.
Length = 999
Score = 29.1 bits (62), Expect = 8.0
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +3
Query: 564 SSRLFKTTSTPSALIGDFINSSTLSTNSASGIPEYDLGFEGSTPSPSIFIYCE 722
S+ + TTSTP+A + +++T + A+G P + S PS ++F CE
Sbjct: 26 SNEMQPTTSTPTAAHKEATSTATTTATYANGNPNSNANPSQSQPSNALF--CE 76
>AF132213-1|AAF61321.1| 999|Drosophila melanogaster smaug protein
protein.
Length = 999
Score = 29.1 bits (62), Expect = 8.0
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +3
Query: 564 SSRLFKTTSTPSALIGDFINSSTLSTNSASGIPEYDLGFEGSTPSPSIFIYCE 722
S+ + TTSTP+A + +++T + A+G P + S PS ++F CE
Sbjct: 26 SNEMQPTTSTPTAAHKEATSTATTTATYANGNPNSNANPSQSQPSNALF--CE 76
>AE014296-1566|AAN11981.1| 999|Drosophila melanogaster CG5263-PC,
isoform C protein.
Length = 999
Score = 29.1 bits (62), Expect = 8.0
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +3
Query: 564 SSRLFKTTSTPSALIGDFINSSTLSTNSASGIPEYDLGFEGSTPSPSIFIYCE 722
S+ + TTSTP+A + +++T + A+G P + S PS ++F CE
Sbjct: 26 SNEMQPTTSTPTAAHKEATSTATTTATYANGNPNSNANPSQSQPSNALF--CE 76
>AE014296-1565|AAF50334.3| 999|Drosophila melanogaster CG5263-PB,
isoform B protein.
Length = 999
Score = 29.1 bits (62), Expect = 8.0
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +3
Query: 564 SSRLFKTTSTPSALIGDFINSSTLSTNSASGIPEYDLGFEGSTPSPSIFIYCE 722
S+ + TTSTP+A + +++T + A+G P + S PS ++F CE
Sbjct: 26 SNEMQPTTSTPTAAHKEATSTATTTATYANGNPNSNANPSQSQPSNALF--CE 76
>AE014296-1564|AAF50333.3| 999|Drosophila melanogaster CG5263-PA,
isoform A protein.
Length = 999
Score = 29.1 bits (62), Expect = 8.0
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +3
Query: 564 SSRLFKTTSTPSALIGDFINSSTLSTNSASGIPEYDLGFEGSTPSPSIFIYCE 722
S+ + TTSTP+A + +++T + A+G P + S PS ++F CE
Sbjct: 26 SNEMQPTTSTPTAAHKEATSTATTTATYANGNPNSNANPSQSQPSNALF--CE 76
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,923,002
Number of Sequences: 53049
Number of extensions: 594760
Number of successful extensions: 1916
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1912
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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