Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11b06
(809 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 26 1.6
AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 25 2.8
AJ276487-1|CAB90819.1| 375|Anopheles gambiae serine protease pr... 25 2.8
AY341165-1|AAR13729.1| 192|Anopheles gambiae cytochrome P450 CY... 24 4.8
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 24 4.8
Y17702-1|CAA76822.2| 260|Anopheles gambiae putative gVAG protei... 24 6.4
AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking p... 24 6.4
AY578807-1|AAT07312.1| 438|Anopheles gambiae punt protein. 24 6.4
AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein. 24 6.4
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 24 6.4
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 23 8.4
AJ439060-2|CAD27753.1| 135|Anopheles gambiae putative cytoskele... 23 8.4
AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical prot... 23 8.4
AJ438610-10|CAD27482.1| 135|Anopheles gambiae putative cytoskel... 23 8.4
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 25.8 bits (54), Expect = 1.6
Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = +2
Query: 227 WSSEWSCAAWVRRGKG--PQEAAWAARR 304
W SEW C+ R P AAW +R+
Sbjct: 848 WQSEWDCSTKGRTTHALIPNIAAWTSRK 875
>AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit
protein.
Length = 837
Score = 25.0 bits (52), Expect = 2.8
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -1
Query: 446 QNEASPELKQRIDRDRNKTTYRVDYCE 366
++ + PE ++R D N TY+ CE
Sbjct: 498 EHPSDPEYRERADECSNAGTYKCGICE 524
>AJ276487-1|CAB90819.1| 375|Anopheles gambiae serine protease
protein.
Length = 375
Score = 25.0 bits (52), Expect = 2.8
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +1
Query: 652 CGHRQSGG-LVCCMHAW*NANS*PDSFGV 735
CG R GG LVCC N P FGV
Sbjct: 71 CGTRPDGGALVCCPAFVNEPNCGPSVFGV 99
>AY341165-1|AAR13729.1| 192|Anopheles gambiae cytochrome P450
CYP9K1 protein.
Length = 192
Score = 24.2 bits (50), Expect = 4.8
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 487 ISFNRNTQCCTASSRTKRLQSSSKGSTEIETRPL 386
+ F T C + RT R + + G+TE+E + L
Sbjct: 34 LMFGLITSYCDGAVRTIRSELGADGTTELEMKEL 67
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 24.2 bits (50), Expect = 4.8
Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -1
Query: 551 VRVAASPETPTSRYDQPNAFLDKLQSKYPMLYSILQNEASPEL-KQRIDRD 402
+ AA ++ D ++K +K LY++++ E P+L K R +R+
Sbjct: 165 IEEAAGTSMYEAKRDSALKLIEKKDAKLNELYAVIREEIEPKLEKLRKERE 215
>Y17702-1|CAA76822.2| 260|Anopheles gambiae putative gVAG protein
precursor protein.
Length = 260
Score = 23.8 bits (49), Expect = 6.4
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -1
Query: 413 IDRDRNKTTYRVDYCETGPGAKFEGLQRAADDSGS 309
+DR ++ C+TG +KF GL A+++ S
Sbjct: 222 MDRSVYQSGPTASQCKTGRNSKFPGLCNASEEPRS 256
>AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking
protein.
Length = 932
Score = 23.8 bits (49), Expect = 6.4
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 189 RIATSPSAALLGHGPR-SGHARLGSDAARVP 278
RI S SA + H PR S H R GS+A+ P
Sbjct: 823 RIVVSKSANAM-HPPRGSRHTRQGSEASSPP 852
>AY578807-1|AAT07312.1| 438|Anopheles gambiae punt protein.
Length = 438
Score = 23.8 bits (49), Expect = 6.4
Identities = 10/35 (28%), Positives = 15/35 (42%)
Frame = -3
Query: 129 RSFQAWRYHNARQATQEIVPNFWSELSHCIYASKC 25
R F WR+H A E + + W + +S C
Sbjct: 369 RIFDPWRHHPGLVAICETMEDCWDHDAEARLSSSC 403
>AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein.
Length = 679
Score = 23.8 bits (49), Expect = 6.4
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2
Query: 572 GEDPLSHSDSSRPPSQAAVAASPLQSTAGIGSRAA 676
GE P S P Q +V SP+ AG AA
Sbjct: 269 GEQPASSVGDPANPQQPSVIFSPVPRLAGSSPAAA 303
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 23.8 bits (49), Expect = 6.4
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = -1
Query: 677 RPPDCRCPQYSGGEMPQLPPGKE--GGWSRNEIMGPLLDP 564
+PP R P GG PQ+ P G + ++GP P
Sbjct: 262 QPPPIRPPNPMGGPRPQISPQNSNLSGGMPSGMVGPPRPP 301
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 23.4 bits (48), Expect = 8.4
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +2
Query: 557 TVLDLGEDPLSHSDSSRPP----SQAAVAASPLQSTAGIGSRAASYAACMLGRTL 709
TVL G+ +S S S+ P + + STA G+ SY++ LG TL
Sbjct: 652 TVLAEGDKSVSASASNLPKIPERKSSLTKLNRSNSTASNGTLERSYSSSTLGSTL 706
>AJ439060-2|CAD27753.1| 135|Anopheles gambiae putative cytoskeletal
regulator protein.
Length = 135
Score = 23.4 bits (48), Expect = 8.4
Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Frame = -1
Query: 443 NEASPELKQRIDRDRNKTTYRVDYCETGPGAKFEGLQRA----ADDSGSGPCAQPMRLPG 276
NE S +KQRIDR + +VD C+ + R+ + C P
Sbjct: 74 NERSLGIKQRIDR----LSAKVDQCDPKQVTVVSSISRSRSTVVNSYNLTTCPSWAHAPN 129
Query: 275 DPCR 264
PCR
Sbjct: 130 GPCR 133
>AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical protein
protein.
Length = 765
Score = 23.4 bits (48), Expect = 8.4
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +2
Query: 557 TVLDLGEDPLSHSDSSRPP----SQAAVAASPLQSTAGIGSRAASYAACMLGRTL 709
TVL G+ +S S S+ P + + STA G+ SY++ LG TL
Sbjct: 653 TVLAEGDKSVSASASNLPKIPERKSSLTKLNRSNSTASNGTLERSYSSSTLGSTL 707
>AJ438610-10|CAD27482.1| 135|Anopheles gambiae putative
cytoskeletal regulator protein.
Length = 135
Score = 23.4 bits (48), Expect = 8.4
Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Frame = -1
Query: 443 NEASPELKQRIDRDRNKTTYRVDYCETGPGAKFEGLQRA----ADDSGSGPCAQPMRLPG 276
NE S +KQRIDR + +VD C+ + R+ + C P
Sbjct: 74 NERSLGIKQRIDR----LSAKVDQCDPKQVTVVSSISRSRSTVVNSYNLTTCPSWAHAPN 129
Query: 275 DPCR 264
PCR
Sbjct: 130 GPCR 133
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 975,068
Number of Sequences: 2352
Number of extensions: 22107
Number of successful extensions: 100
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 100
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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