Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte11a24
         (822 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC030141-1|AAH30141.1| 1163|Homo sapiens immunoglobulin superfam...    30   8.8  
AY358128-1|AAQ88495.1|  717|Homo sapiens IGSF9 protein.                30   8.8  
AL513485-5|CAI14606.1| 1163|Homo sapiens immunoglobulin superfam...    30   8.8  
AL513485-4|CAI14605.1| 1179|Homo sapiens immunoglobulin superfam...    30   8.8  
AB037776-1|BAA92593.1| 1189|Homo sapiens KIAA1355 protein protein.     30   8.8  

>BC030141-1|AAH30141.1| 1163|Homo sapiens immunoglobulin superfamily,
            member 9 protein.
          Length = 1163

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -3

Query: 700  WSRMNSLNDLGFERKTPKTMWKDWDIEFPGDLYSLWGTLHL 578
            W R   +  +   R T      +WD EFPGD+  L  TLHL
Sbjct: 1049 WPRREHVVTVSKRRNTSVDENYEWDSEFPGDM-ELLETLHL 1088


>AY358128-1|AAQ88495.1|  717|Homo sapiens IGSF9 protein.
          Length = 717

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -3

Query: 700 WSRMNSLNDLGFERKTPKTMWKDWDIEFPGDLYSLWGTLHL 578
           W R   +  +   R T      +WD EFPGD+  L  TLHL
Sbjct: 603 WPRREHVVTVSKRRNTSVDENYEWDSEFPGDM-ELLETLHL 642


>AL513485-5|CAI14606.1| 1163|Homo sapiens immunoglobulin superfamily,
            member 9 protein.
          Length = 1163

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -3

Query: 700  WSRMNSLNDLGFERKTPKTMWKDWDIEFPGDLYSLWGTLHL 578
            W R   +  +   R T      +WD EFPGD+  L  TLHL
Sbjct: 1049 WPRREHVVTVSKRRNTSVDENYEWDSEFPGDM-ELLETLHL 1088


>AL513485-4|CAI14605.1| 1179|Homo sapiens immunoglobulin superfamily,
            member 9 protein.
          Length = 1179

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -3

Query: 700  WSRMNSLNDLGFERKTPKTMWKDWDIEFPGDLYSLWGTLHL 578
            W R   +  +   R T      +WD EFPGD+  L  TLHL
Sbjct: 1065 WPRREHVVTVSKRRNTSVDENYEWDSEFPGDM-ELLETLHL 1104


>AB037776-1|BAA92593.1| 1189|Homo sapiens KIAA1355 protein protein.
          Length = 1189

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -3

Query: 700  WSRMNSLNDLGFERKTPKTMWKDWDIEFPGDLYSLWGTLHL 578
            W R   +  +   R T      +WD EFPGD+  L  TLHL
Sbjct: 1075 WPRREHVVTVSKRRNTSVDENYEWDSEFPGDM-ELLETLHL 1114


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,011,172
Number of Sequences: 237096
Number of extensions: 2614668
Number of successful extensions: 4529
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4524
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10259383312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)