Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11a23
(735 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY048675-1|AAL06601.1| 927|Drosophila melanogaster myosin phosp... 31 1.2
AE014296-3027|AAF49256.2| 435|Drosophila melanogaster CG4174-PA... 31 1.6
AL031028-1|CAA19845.2| 1795|Drosophila melanogaster EG:56G7.1 pr... 31 2.2
AE014298-231|AAF45644.1| 1795|Drosophila melanogaster CG14796-PA... 31 2.2
AE013599-3680|AAF47056.1| 157|Drosophila melanogaster CG12491-P... 31 2.2
AE013599-3679|ABI31112.1| 157|Drosophila melanogaster CG34105-P... 31 2.2
AF529180-1|AAO84908.1| 2898|Drosophila melanogaster extracellula... 30 2.8
AF529179-1|AAO84907.1| 2776|Drosophila melanogaster extracellula... 30 2.8
AF205357-1|AAG37995.1| 2174|Drosophila melanogaster extracellula... 30 2.8
AE014297-4238|AAF56795.3| 2894|Drosophila melanogaster CG33103-P... 30 3.8
AE014297-4237|AAF56794.3| 2772|Drosophila melanogaster CG33103-P... 30 3.8
AE013599-260|AAS64790.2| 1998|Drosophila melanogaster CG33558-PA... 29 5.0
BT029081-1|ABJ17014.1| 339|Drosophila melanogaster IP10546p pro... 29 6.6
AE014296-2627|AAF49545.1| 339|Drosophila melanogaster CG13075-P... 29 6.6
>AY048675-1|AAL06601.1| 927|Drosophila melanogaster myosin
phosphatase DMBS-L protein.
Length = 927
Score = 31.5 bits (68), Expect = 1.2
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Frame = -2
Query: 500 STPWSSETWDSAVFNSANSEKTLTPKSSTSYGATTPFFSVSSKNTLTLLESAVSL--NES 327
STP ++ T S++FN+ +S T +ST+ + S+ N L ++ + SL N
Sbjct: 476 STPTTTTTTTSSIFNNTHSN---TNNTSTTQQQPAAAAAASAANQLYSVQRSASLKDNSM 532
Query: 326 HVMKPTIR-ATQSMSSGT 276
+ KPT+ AT + ++ T
Sbjct: 533 YYRKPTVTIATPTSTAAT 550
>AE014296-3027|AAF49256.2| 435|Drosophila melanogaster CG4174-PA,
isoform A protein.
Length = 435
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +1
Query: 385 LKNGVVAP*DVEDFGVSVFSEFALLKTAESHVSLLQGVLIMLK 513
+K VV+ + DF +S S+ +LLK E+HV+ LQ +LK
Sbjct: 16 VKGEVVSAPESYDFAISSESQLSLLKLKETHVNNLQSYKKVLK 58
>AL031028-1|CAA19845.2| 1795|Drosophila melanogaster EG:56G7.1
protein.
Length = 1795
Score = 30.7 bits (66), Expect = 2.2
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Frame = -2
Query: 509 SMISTPWSSETWDSAVFNSANSEKTLTPKSSTSYGATTPFFSVSSK-NTLTLLESAVSLN 333
S +ST T S S+ + T TPK ST TT + +++ T T L S S
Sbjct: 684 STVSTTTKKSTESSPKPTSSTGKPTTTPKPSTRTTPTTTKVTTTTQITTTTPLRS--STE 741
Query: 332 ESHVMKPTIRATQSMSSGTLSSWTLESFTST 240
+ PT Q ++ TL+ S T+T
Sbjct: 742 TTSTQPPTTTTPQPTTTTTLTVTPKTSTTTT 772
>AE014298-231|AAF45644.1| 1795|Drosophila melanogaster CG14796-PA
protein.
Length = 1795
Score = 30.7 bits (66), Expect = 2.2
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Frame = -2
Query: 509 SMISTPWSSETWDSAVFNSANSEKTLTPKSSTSYGATTPFFSVSSK-NTLTLLESAVSLN 333
S +ST T S S+ + T TPK ST TT + +++ T T L S S
Sbjct: 684 STVSTTTKKSTESSPKPTSSTGKPTTTPKPSTRTTPTTTKVTTTTQITTTTPLRS--STE 741
Query: 332 ESHVMKPTIRATQSMSSGTLSSWTLESFTST 240
+ PT Q ++ TL+ S T+T
Sbjct: 742 TTSTQPPTTTTPQPTTTTTLTVTPKTSTTTT 772
>AE013599-3680|AAF47056.1| 157|Drosophila melanogaster CG12491-PA
protein.
Length = 157
Score = 30.7 bits (66), Expect = 2.2
Identities = 22/57 (38%), Positives = 27/57 (47%)
Frame = -2
Query: 509 SMISTPWSSETWDSAVFNSANSEKTLTPKSSTSYGATTPFFSVSSKNTLTLLESAVS 339
S STP SS + + NS S + TP SS+S T+P S SS T S S
Sbjct: 46 SSSSTPSSSSSTSTPSSNSTTSTSSSTPSSSSS---TSPTSSTSSTTATTTAPSTSS 99
>AE013599-3679|ABI31112.1| 157|Drosophila melanogaster CG34105-PA
protein.
Length = 157
Score = 30.7 bits (66), Expect = 2.2
Identities = 22/57 (38%), Positives = 27/57 (47%)
Frame = -2
Query: 509 SMISTPWSSETWDSAVFNSANSEKTLTPKSSTSYGATTPFFSVSSKNTLTLLESAVS 339
S STP SS + + NS S + TP SS+S T+P S SS T S S
Sbjct: 46 SSSSTPSSSSSTSTPSSNSTTSTSSSTPSSSSS---TSPTSSTSSTTATTTAPSTSS 99
>AF529180-1|AAO84908.1| 2898|Drosophila melanogaster extracellular
matrix protein papilin3 protein.
Length = 2898
Score = 30.3 bits (65), Expect = 2.8
Identities = 28/99 (28%), Positives = 43/99 (43%)
Frame = -2
Query: 431 TPKSSTSYGATTPFFSVSSKNTLTLLESAVSLNESHVMKPTIRATQSMSSGTLSSWTLES 252
TP+SST ++T + SS N+ + ES+ + S V + + S+ +SS T S
Sbjct: 894 TPESSTEASSSTDDSTDSSDNSSNVSESSTEASSSSVSDSS--DSSDGSTDGVSSTTENS 951
Query: 251 FTSTGLIDSDILKVEYPWSPCTDMSGTDVYPSSVDTFES 135
ST SD +D + SS D+ ES
Sbjct: 952 SDSTSDATSDSTASSDSTDSTSDQTTETTPESSTDSTES 990
>AF529179-1|AAO84907.1| 2776|Drosophila melanogaster extracellular
matrix protein papilin2 protein.
Length = 2776
Score = 30.3 bits (65), Expect = 2.8
Identities = 28/99 (28%), Positives = 43/99 (43%)
Frame = -2
Query: 431 TPKSSTSYGATTPFFSVSSKNTLTLLESAVSLNESHVMKPTIRATQSMSSGTLSSWTLES 252
TP+SST ++T + SS N+ + ES+ + S V + + S+ +SS T S
Sbjct: 894 TPESSTEASSSTDDSTDSSDNSSNVSESSTEASSSSVSDSS--DSSDGSTDGVSSTTENS 951
Query: 251 FTSTGLIDSDILKVEYPWSPCTDMSGTDVYPSSVDTFES 135
ST SD +D + SS D+ ES
Sbjct: 952 SDSTSDATSDSTASSDSTDSTSDQTTETTPESSTDSTES 990
>AF205357-1|AAG37995.1| 2174|Drosophila melanogaster extracellular
matrix protein papilinprotein.
Length = 2174
Score = 30.3 bits (65), Expect = 2.8
Identities = 28/99 (28%), Positives = 43/99 (43%)
Frame = -2
Query: 431 TPKSSTSYGATTPFFSVSSKNTLTLLESAVSLNESHVMKPTIRATQSMSSGTLSSWTLES 252
TP+SST ++T + SS N+ + ES+ + S V + + S+ +SS T S
Sbjct: 894 TPESSTEASSSTDDSTDSSDNSSNVSESSTEASSSSVSDSS--DSSDGSTDGVSSTTENS 951
Query: 251 FTSTGLIDSDILKVEYPWSPCTDMSGTDVYPSSVDTFES 135
ST SD +D + SS D+ ES
Sbjct: 952 SDSTSDATSDSTASSDSTDSTSDQTTETTPESSTDSTES 990
>AE014297-4238|AAF56795.3| 2894|Drosophila melanogaster CG33103-PA,
isoform A protein.
Length = 2894
Score = 29.9 bits (64), Expect = 3.8
Identities = 28/99 (28%), Positives = 42/99 (42%)
Frame = -2
Query: 431 TPKSSTSYGATTPFFSVSSKNTLTLLESAVSLNESHVMKPTIRATQSMSSGTLSSWTLES 252
TP+SST ++T + SS N+ + ES+ + S V + S+ +SS T S
Sbjct: 894 TPESSTEASSSTDDSTDSSDNSSNVSESSTEASSSSVSDS--NDSSDGSTDGVSSTTENS 951
Query: 251 FTSTGLIDSDILKVEYPWSPCTDMSGTDVYPSSVDTFES 135
ST SD +D + SS D+ ES
Sbjct: 952 SDSTSDATSDSTASSDSTDSTSDQTTETTPESSTDSTES 990
>AE014297-4237|AAF56794.3| 2772|Drosophila melanogaster CG33103-PB,
isoform B protein.
Length = 2772
Score = 29.9 bits (64), Expect = 3.8
Identities = 28/99 (28%), Positives = 42/99 (42%)
Frame = -2
Query: 431 TPKSSTSYGATTPFFSVSSKNTLTLLESAVSLNESHVMKPTIRATQSMSSGTLSSWTLES 252
TP+SST ++T + SS N+ + ES+ + S V + S+ +SS T S
Sbjct: 894 TPESSTEASSSTDDSTDSSDNSSNVSESSTEASSSSVSDS--NDSSDGSTDGVSSTTENS 951
Query: 251 FTSTGLIDSDILKVEYPWSPCTDMSGTDVYPSSVDTFES 135
ST SD +D + SS D+ ES
Sbjct: 952 SDSTSDATSDSTASSDSTDSTSDQTTETTPESSTDSTES 990
>AE013599-260|AAS64790.2| 1998|Drosophila melanogaster CG33558-PA
protein.
Length = 1998
Score = 29.5 bits (63), Expect = 5.0
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = -2
Query: 488 SSETWDSA-VFNSANSEKTLTPKSSTSYGATTPFFSVSSKNTLTLLESAVSLNESHVMKP 312
SS SA NS+ LTP +TS+ A P F +SS + L + + N S P
Sbjct: 1591 SSSAMSSAHAANSSTKPSILTP--TTSFNAL-PHFPLSSSTSSLLSKVSSFSNSSSASPP 1647
Query: 311 TIRATQSMSS 282
T AT +S
Sbjct: 1648 TTAATSGSAS 1657
>BT029081-1|ABJ17014.1| 339|Drosophila melanogaster IP10546p
protein.
Length = 339
Score = 29.1 bits (62), Expect = 6.6
Identities = 23/101 (22%), Positives = 43/101 (42%)
Frame = -2
Query: 407 GATTPFFSVSSKNTLTLLESAVSLNESHVMKPTIRATQSMSSGTLSSWTLESFTSTGLID 228
GA+TPFF ++ + +T ++ S + + S S + SS T S T++ +
Sbjct: 230 GASTPFFDSTTSSCVTTRPTSCSDTTTQSPSDSSSTASSTESSSESSSTTASSTASSSTE 289
Query: 227 SDILKVEYPWSPCTDMSGTDVYPSSVDTFESRKGSRAAMNT 105
S S T+ S T+ ++ T +S + +T
Sbjct: 290 STPTTASSSASSSTE-SSTESSSTTASTTQSSSTESSTQST 329
>AE014296-2627|AAF49545.1| 339|Drosophila melanogaster CG13075-PA
protein.
Length = 339
Score = 29.1 bits (62), Expect = 6.6
Identities = 23/101 (22%), Positives = 43/101 (42%)
Frame = -2
Query: 407 GATTPFFSVSSKNTLTLLESAVSLNESHVMKPTIRATQSMSSGTLSSWTLESFTSTGLID 228
GA+TPFF ++ + +T ++ S + + S S + SS T S T++ +
Sbjct: 230 GASTPFFDSTTSSCVTTRPTSCSDTTTQSPSDSSSTASSTESSSESSSTTASSTASSSTE 289
Query: 227 SDILKVEYPWSPCTDMSGTDVYPSSVDTFESRKGSRAAMNT 105
S S T+ S T+ ++ T +S + +T
Sbjct: 290 STPTTASSSASSSTE-SSTESSSTTASTTQSSSTESSTQST 329
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,258,195
Number of Sequences: 53049
Number of extensions: 588549
Number of successful extensions: 2017
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2013
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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