Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11a21
(851 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50045-3|CAA90364.1| 210|Caenorhabditis elegans Hypothetical pr... 64 9e-11
AF304123-1|AAG50236.1| 210|Caenorhabditis elegans adenylate kin... 64 9e-11
Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical pr... 59 3e-09
Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical pr... 58 8e-09
Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical pr... 52 7e-07
AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical ... 52 7e-07
L23651-13|AAA27957.3| 251|Caenorhabditis elegans Hypothetical p... 46 5e-05
Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical pr... 35 0.064
AC024824-2|AAK85502.1| 740|Caenorhabditis elegans Hypothetical ... 34 0.15
AF016688-6|AAB66074.2| 274|Caenorhabditis elegans Hypothetical ... 33 0.34
Z75527-1|CAA99774.1| 441|Caenorhabditis elegans Hypothetical pr... 32 0.45
L16621-11|AAA28226.2| 192|Caenorhabditis elegans Hypothetical p... 31 0.79
AY255668-1|AAQ96605.1| 167|Caenorhabditis elegans MiRP5 protein. 31 1.0
AF098994-1|AAC67472.2| 167|Caenorhabditis elegans Hypothetical ... 31 1.0
Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z68882-15|CAE17744.1| 128|Caenorhabditis elegans Hypothetical p... 30 1.8
U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative transc... 30 1.8
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 30 1.8
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 30 1.8
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 30 1.8
U00055-2|AAA50721.1| 223|Caenorhabditis elegans Hypothetical pr... 30 2.4
AY741200-1|AAU89102.1| 596|Caenorhabditis elegans STE20-like se... 30 2.4
AL132898-15|CAC14417.2| 596|Caenorhabditis elegans Hypothetical... 30 2.4
AF078790-10|AAC26931.1| 197|Caenorhabditis elegans Hypothetical... 30 2.4
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical pr... 29 3.2
X70830-1|CAA50178.1| 534|Caenorhabditis elegans Cytoplasmic int... 29 3.2
U50309-6|AAG24134.1| 247|Caenorhabditis elegans Hypothetical pr... 29 3.2
U49831-7|AAA93408.1| 558|Caenorhabditis elegans Intermediate fi... 29 3.2
U49831-6|AAA93407.1| 589|Caenorhabditis elegans Intermediate fi... 29 3.2
AC024090-8|AAF35422.2| 649|Caenorhabditis elegans Hypothetical ... 29 3.2
Z81048-4|CAB02844.1| 219|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p... 29 4.2
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p... 29 4.2
Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical p... 29 4.2
Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical p... 29 4.2
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z70750-13|CAA94745.2| 679|Caenorhabditis elegans Hypothetical p... 29 5.5
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 29 5.5
U97552-5|AAQ01520.1| 605|Caenorhabditis elegans Hypothetical pr... 29 5.5
U97552-4|AAX55684.1| 666|Caenorhabditis elegans Hypothetical pr... 29 5.5
U97552-3|AAQ01521.1| 663|Caenorhabditis elegans Hypothetical pr... 29 5.5
U21308-15|AAB93316.2| 412|Caenorhabditis elegans Hypothetical p... 29 5.5
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 29 5.5
AF239998-1|AAF63494.1| 679|Caenorhabditis elegans MDF-1 protein. 29 5.5
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 29 5.5
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 28 7.3
U58735-4|AAC48144.1| 479|Caenorhabditis elegans Hypothetical pr... 28 7.3
U56963-8|AAB38121.1| 155|Caenorhabditis elegans Hypothetical pr... 28 7.3
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 28 7.3
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 28 7.3
AC084158-18|AAK68583.1| 300|Caenorhabditis elegans Hypothetical... 28 7.3
AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical... 28 7.3
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical... 28 7.3
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 9.7
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 28 9.7
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 28 9.7
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 28 9.7
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 28 9.7
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 28 9.7
AC024748-2|AAF60412.1| 236|Caenorhabditis elegans Hypothetical ... 28 9.7
>Z50045-3|CAA90364.1| 210|Caenorhabditis elegans Hypothetical
protein F38B2.4 protein.
Length = 210
Score = 64.5 bits (150), Expect = 9e-11
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 2/142 (1%)
Frame = -1
Query: 737 LPVIFVNGVPGAGNQTVAETISDITGYNMIRPGELERVEATRDTVRGRMVAEKIRTLEDL 558
+P+ F+ G PG+G T + I G + G+L R E + RG + + + +
Sbjct: 20 VPIFFIVGGPGSGKGTQCDKIVAKYGLTHLSSGDLLRDEVKSGSPRGAQLTAIMESGALV 79
Query: 557 PEQLTVDLIKEEMLSQPE--AKGFILVGFPRNSRMSDIFSRQVKWPEKVVALEVDNEVAA 384
P ++ +DL+KE ML E +KGF++ G+PR F +++ + V+ +V E
Sbjct: 80 PLEVVLDLVKEAMLKAIEKGSKGFLIDGYPREVAQGQQFESEIQEAKLVLFFDVAEETLV 139
Query: 383 ARLQNKLSELGRPESEINAARQ 318
RL ++ GR + + ++
Sbjct: 140 KRLLHRAQTSGRADDNADTIKK 161
>AF304123-1|AAG50236.1| 210|Caenorhabditis elegans adenylate kinase
1 protein.
Length = 210
Score = 64.5 bits (150), Expect = 9e-11
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 2/142 (1%)
Frame = -1
Query: 737 LPVIFVNGVPGAGNQTVAETISDITGYNMIRPGELERVEATRDTVRGRMVAEKIRTLEDL 558
+P+ F+ G PG+G T + I G + G+L R E + RG + + + +
Sbjct: 20 VPIFFIVGGPGSGKGTQCDKIVAKYGLTHLSSGDLLRDEVKSGSPRGAQLTAIMESGALV 79
Query: 557 PEQLTVDLIKEEMLSQPE--AKGFILVGFPRNSRMSDIFSRQVKWPEKVVALEVDNEVAA 384
P ++ +DL+KE ML E +KGF++ G+PR F +++ + V+ +V E
Sbjct: 80 PLEVVLDLVKEAMLKAIEKGSKGFLIDGYPREVAQGQQFESEIQEAKLVLFFDVAEETLV 139
Query: 383 ARLQNKLSELGRPESEINAARQ 318
RL ++ GR + + ++
Sbjct: 140 KRLLHRAQTSGRADDNADTIKK 161
>Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical
protein C29F7.3 protein.
Length = 191
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = -1
Query: 731 VIFVNGVPGAGNQTVAETISDITGYNMIRPGELERVEATR-DTVRGRMVAEKIRTLEDLP 555
V+FV G PG+G T+ I + GY + G+L R E R + G ++ I+ +P
Sbjct: 4 VVFVLGPPGSGKGTICTQIHENLGYVHLSAGDLLRAERERAGSEYGALIEGHIKNGSIVP 63
Query: 554 EQLTVDLIKEEMLSQPEAKGFILVGFPRN 468
++T L++ M++ +A GF++ GFPRN
Sbjct: 64 VEITCALLENAMIASKDANGFLIDGFPRN 92
>Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical
protein F40F8.1 protein.
Length = 191
Score = 58.0 bits (134), Expect = 8e-09
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = -1
Query: 731 VIFVNGVPGAGNQTVAETISDITGYNMIRPGELERVEATRDTVR-GRMVAEKIRTLEDLP 555
V+FV G PG+G T+ I + Y + G+L R E R+ G ++ I+ +P
Sbjct: 4 VVFVLGPPGSGKGTICAKIQENLNYVHLSAGDLLRAERQREGSEFGALIESHIKNGSIVP 63
Query: 554 EQLTVDLIKEEMLSQPEAKGFILVGFPRN 468
++T L++ M + +AKGF++ GFPRN
Sbjct: 64 VEITCSLLENAMKACGDAKGFLVDGFPRN 92
>Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 51.6 bits (118), Expect = 7e-07
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 6/137 (4%)
Frame = -1
Query: 758 DMSPVRRLPVIFVNGVPGAGNQT----VAETISDITGYNMIRPGELERVEAT-RDTV-RG 597
+++ + +P+I G PG G VA++++D ++ P + +D
Sbjct: 162 EVARIPDVPIILFMGGPGGGKTRHAARVADSLADNGLVHICMPDIIRTALGKYKDKYPEW 221
Query: 596 RMVAEKIRTLEDLPEQLTVDLIKEEMLSQPEAKGFILVGFPRNSRMSDIFSRQVKWPEKV 417
+ E E +P QL + L+K EM P+A GF L G+PR +R + F RQVK
Sbjct: 222 KEANEHYIRGELIPNQLALTLLKAEMGRHPDAMGFFLEGYPREARQVEDFERQVKSVNMA 281
Query: 416 VALEVDNEVAAARLQNK 366
+ L+ D ++ +
Sbjct: 282 LILDYDERTLREHMERR 298
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/142 (16%), Positives = 67/142 (47%), Gaps = 4/142 (2%)
Frame = -1
Query: 734 PVIFVNGVPGAGNQTVAETISD-ITGYNMIRPGEL--ERVEATRDTVRGRMVAEKIRTLE 564
PVI V G PG+ ++ I+ G+ M+ G++ +++ ++ V++K+ +
Sbjct: 514 PVILVLGAPGSQKNDISRRIAQKYDGFTMLSMGDILRKKINNEKNDEMWDKVSKKMNNGD 573
Query: 563 DLPEQLTVDLIKEEMLSQPEAK-GFILVGFPRNSRMSDIFSRQVKWPEKVVALEVDNEVA 387
+P ++ ++ EE+ S+ + G+++ G+P++ ++ + + ++ +
Sbjct: 574 PIPTKMCRTVLYEELHSRGTSNWGYVIEGYPKSPDQLVDLEHSLQRTDLAILIDCTEQFC 633
Query: 386 AARLQNKLSELGRPESEINAAR 321
+ + E R + + +A R
Sbjct: 634 LEVINKRNRENKRSDDDSDAVR 655
>AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 51.6 bits (118), Expect = 7e-07
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 6/137 (4%)
Frame = -1
Query: 758 DMSPVRRLPVIFVNGVPGAGNQT----VAETISDITGYNMIRPGELERVEAT-RDTV-RG 597
+++ + +P+I G PG G VA++++D ++ P + +D
Sbjct: 162 EVARIPDVPIILFMGGPGGGKTRHAARVADSLADNGLVHICMPDIIRTALGKYKDKYPEW 221
Query: 596 RMVAEKIRTLEDLPEQLTVDLIKEEMLSQPEAKGFILVGFPRNSRMSDIFSRQVKWPEKV 417
+ E E +P QL + L+K EM P+A GF L G+PR +R + F RQVK
Sbjct: 222 KEANEHYIRGELIPNQLALTLLKAEMGRHPDAMGFFLEGYPREARQVEDFERQVKSVNMA 281
Query: 416 VALEVDNEVAAARLQNK 366
+ L+ D ++ +
Sbjct: 282 LILDYDERTLREHMERR 298
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/142 (16%), Positives = 67/142 (47%), Gaps = 4/142 (2%)
Frame = -1
Query: 734 PVIFVNGVPGAGNQTVAETISD-ITGYNMIRPGEL--ERVEATRDTVRGRMVAEKIRTLE 564
PVI V G PG+ ++ I+ G+ M+ G++ +++ ++ V++K+ +
Sbjct: 514 PVILVLGAPGSQKNDISRRIAQKYDGFTMLSMGDILRKKINNEKNDEMWDKVSKKMNNGD 573
Query: 563 DLPEQLTVDLIKEEMLSQPEAK-GFILVGFPRNSRMSDIFSRQVKWPEKVVALEVDNEVA 387
+P ++ ++ EE+ S+ + G+++ G+P++ ++ + + ++ +
Sbjct: 574 PIPTKMCRTVLYEELHSRGTSNWGYVIEGYPKSPDQLVDLEHSLQRTDLAILIDCTEQFC 633
Query: 386 AARLQNKLSELGRPESEINAAR 321
+ + E R + + +A R
Sbjct: 634 LEVINKRNRENKRSDDDSDAVR 655
>L23651-13|AAA27957.3| 251|Caenorhabditis elegans Hypothetical
protein C29E4.8 protein.
Length = 251
Score = 45.6 bits (103), Expect = 5e-05
Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 5/140 (3%)
Frame = -1
Query: 743 RRLPVIFVNGVPGAGNQTVAETISDITGYNMIRPGELERVEATRDTVRGRMVAEKIRTLE 564
R + IF+ G PG+G T A + + G+L R E + G+ + + +
Sbjct: 25 RGIRAIFI-GPPGSGKGTQAPAFAQKYFSCHLATGDLLRAEVASGSEFGKELKATMDAGK 83
Query: 563 DLPEQLTVDLIKEEMLSQPEAK-GFILVGFPRNS----RMSDIFSRQVKWPEKVVALEVD 399
+ +++ LI E+ L +PE K GFIL GFPR S ++ +I R+ + VV +
Sbjct: 84 LVSDEVVCKLI-EQKLEKPECKYGFILDGFPRTSGQAEKLDEILERRKTPLDTVVEFNIA 142
Query: 398 NEVAAARLQNKLSELGRPES 339
+++ R+ +L + S
Sbjct: 143 DDLLVRRITGRLFHIASGRS 162
>Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical protein
C38D4.3 protein.
Length = 1784
Score = 35.1 bits (77), Expect = 0.064
Identities = 33/174 (18%), Positives = 71/174 (40%)
Frame = -1
Query: 626 VEATRDTVRGRMVAEKIRTLEDLPEQLTVDLIKEEMLSQPEAKGFILVGFPRNSRMSDIF 447
+E+ + V V E +D E + +EE +PE ++ P+N +
Sbjct: 1259 LESKSEEVNEEEVVESEEVQQDAKEPEKTEKRQEE--PEPEVMQPVIPEEPQNESLESSI 1316
Query: 446 SRQVKWPEKVVALEVDNEVAAARLQNKLSELGRPESEINAARQIIRDAAHKVKNVQKRFA 267
Q + E+ + +E A ++Q + E RP S + + + + V+ R
Sbjct: 1317 KLQEELQEEPDIVPTGDEDTADKVQEQAVEEDRPPSRNTRSSSVQKSTS----QVEDRDP 1372
Query: 266 RHVVTVDSTDNRTALASTLKEILSDTMEKNKRPVSPEPRPPSTVSAPAVLPPSA 105
+ +V + +R ++++++ + V+ E RPPS + A + S+
Sbjct: 1373 KELVEEERPPSRNTRSASVQKSSNQEKTSESGEVTEEDRPPSRNTRSASVQKSS 1426
>AC024824-2|AAK85502.1| 740|Caenorhabditis elegans Hypothetical
protein Y55B1BR.2 protein.
Length = 740
Score = 33.9 bits (74), Expect = 0.15
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Frame = -1
Query: 296 KVKNVQKRFARHVVTVDSTDNR-TALASTLKEILSDTMEKNKR----PVSPEPRPPSTVS 132
++K ++ + ++ + T + T + K+++ +EK ++ P+ P PRPPS +
Sbjct: 228 RIKALKPERVQKLIELAKTRGKLTDVVEVEKKVVEKVVEKQEKRVLEPLPPPPRPPSVPA 287
Query: 131 APAVLPPSAE 102
PAV PS +
Sbjct: 288 VPAVPTPSRD 297
>AF016688-6|AAB66074.2| 274|Caenorhabditis elegans Hypothetical
protein F18A12.2 protein.
Length = 274
Score = 32.7 bits (71), Expect = 0.34
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = -1
Query: 245 STDNRTALASTLKEILSDTMEKNKRPVSPEPRPPSTVSAPAVLPPSAEVQPT----PDTA 78
ST+ T+ +T +++ + M+K + + P PP + APA + PT P T
Sbjct: 207 STNATTSSQTTKPKLIYNEMKKPRTTLKPSTAPPESSKAPASTGTTLATNPTITGPPGTG 266
Query: 77 DEGNK*FF 54
N FF
Sbjct: 267 KRNNSRFF 274
>Z75527-1|CAA99774.1| 441|Caenorhabditis elegans Hypothetical
protein C15C8.1 protein.
Length = 441
Score = 32.3 bits (70), Expect = 0.45
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = -1
Query: 245 STDNRTALASTLKEILSDTMEKNKRPVSPEPRPPSTVSAPAVLPPSAEVQPTP 87
+T N+ +A+ + +L DT EK K P P P PP+ A+ P + QP P
Sbjct: 331 ATQNKVFIATQNQPLLMDTGEK-KSP--PPPTPPNPPVNHAIAPVAQHPQPMP 380
>L16621-11|AAA28226.2| 192|Caenorhabditis elegans Hypothetical
protein ZK688.1 protein.
Length = 192
Score = 31.5 bits (68), Expect = 0.79
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = -1
Query: 263 HVVTVDS--TDNRTALASTLK-EILSDTMEKNKRPVSPEPRPPSTVSAPAVLPPSAEVQP 93
H TV++ DNRT ++ E + +E+ + V PEP P+ P V PP + +QP
Sbjct: 38 HHQTVENFYLDNRTIYHKIIEIEKRIERIEEKENNVLPEPSKPNN---PVVNPPVSPIQP 94
Query: 92 TPDTADEGN 66
D N
Sbjct: 95 KTDPEQSEN 103
>AY255668-1|AAQ96605.1| 167|Caenorhabditis elegans MiRP5 protein.
Length = 167
Score = 31.1 bits (67), Expect = 1.0
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Frame = -1
Query: 317 IIRDAAHKVKNVQKRFARHVVTVDSTDNRTALASTLKEILSD-TMEKNKRPVSPEPRPPS 141
I+ AA VK ++ + + + + + + +LK S T +K P+ P+P PPS
Sbjct: 37 IVFAAASIVKYIKSKKQQKQPKKKTKKSTKSRSKSLKSKQSAVTPKKRASPIPPQPAPPS 96
Query: 140 T-------VSAPAVLPPSAEVQPT-PDTADEGNK 63
+ + + PS E PT PD D+G++
Sbjct: 97 SPKPTEESATPSSSFAPSTEPTPTVPDKVDDGSE 130
>AF098994-1|AAC67472.2| 167|Caenorhabditis elegans Hypothetical
protein T06A4.2 protein.
Length = 167
Score = 31.1 bits (67), Expect = 1.0
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Frame = -1
Query: 317 IIRDAAHKVKNVQKRFARHVVTVDSTDNRTALASTLKEILSD-TMEKNKRPVSPEPRPPS 141
I+ AA VK ++ + + + + + + +LK S T +K P+ P+P PPS
Sbjct: 37 IVFAAASIVKYIKSKKQQKQPKKKTKKSTKSRSKSLKSKQSAVTPKKRASPIPPQPAPPS 96
Query: 140 T-------VSAPAVLPPSAEVQPT-PDTADEGNK 63
+ + + PS E PT PD D+G++
Sbjct: 97 SPKPTEESATPSSSFAPSTEPTPTVPDKVDDGSE 130
>Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical
protein C40H5.5 protein.
Length = 409
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -1
Query: 167 VSPEPRPPSTVSAPAVLPPSAEVQPTPDTADE 72
V+P P PP+T +AP PP+A QP + + E
Sbjct: 247 VAPPPPPPTTTTAP---PPAAPEQPPREASTE 275
>Z68882-15|CAE17744.1| 128|Caenorhabditis elegans Hypothetical
protein C47E12.12 protein.
Length = 128
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 182 KNKRPVSPEPRPPSTVS-APAVLPPSAEVQPTPDTAD 75
K P +P P P T++ AP + P +A+V TP + D
Sbjct: 32 KTLTPTTPTPVTPMTMTPAPIMFPTAAKVPQTPQSTD 68
>U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative
transcription factor TTX-3 protein.
Length = 409
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -1
Query: 167 VSPEPRPPSTVSAPAVLPPSAEVQPTPDTADE 72
V+P P PP+T +AP PP+A QP + + E
Sbjct: 247 VAPPPPPPTTTTAP---PPAAPEQPPREASTE 275
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/70 (25%), Positives = 34/70 (48%)
Frame = -1
Query: 380 RLQNKLSELGRPESEINAARQIIRDAAHKVKNVQKRFARHVVTVDSTDNRTALASTLKEI 201
R++N L E R +SE+N + RD ++ + Q+R + +D+ + +++
Sbjct: 670 RVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDD---IRRNIQKD 726
Query: 200 LSDTMEKNKR 171
L D EK R
Sbjct: 727 LDDLREKYDR 736
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/70 (25%), Positives = 34/70 (48%)
Frame = -1
Query: 380 RLQNKLSELGRPESEINAARQIIRDAAHKVKNVQKRFARHVVTVDSTDNRTALASTLKEI 201
R++N L E R +SE+N + RD ++ + Q+R + +D+ + +++
Sbjct: 743 RVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDD---IRRNIQKD 799
Query: 200 LSDTMEKNKR 171
L D EK R
Sbjct: 800 LDDLREKYDR 809
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/70 (25%), Positives = 34/70 (48%)
Frame = -1
Query: 380 RLQNKLSELGRPESEINAARQIIRDAAHKVKNVQKRFARHVVTVDSTDNRTALASTLKEI 201
R++N L E R +SE+N + RD ++ + Q+R + +D+ + +++
Sbjct: 743 RVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDD---IRRNIQKD 799
Query: 200 LSDTMEKNKR 171
L D EK R
Sbjct: 800 LDDLREKYDR 809
>U00055-2|AAA50721.1| 223|Caenorhabditis elegans Hypothetical
protein R02F2.5 protein.
Length = 223
Score = 29.9 bits (64), Expect = 2.4
Identities = 31/136 (22%), Positives = 54/136 (39%), Gaps = 7/136 (5%)
Frame = -1
Query: 473 RNSRMSDIFSRQVKWPEKVVALEVDNEVAAARLQNKLSELGRPESEI-----NAARQIIR 309
RN++ SD +RQ P + E ++A R Q + G P + A +++
Sbjct: 14 RNNQRSDQMNRQHTQPSPNASTE---QMAYPRQQPQGIPQGPPPAYAPPAAPKAPEKVVE 70
Query: 308 DAAHKVKNVQ--KRFARHVVTVDSTDNRTALASTLKEILSDTMEKNKRPVSPEPRPPSTV 135
+V + +R A T + + T + T KE+ + ++ P +P P P
Sbjct: 71 PKNRRVTIAEPPERVAEPSPTPEDPELFTCIDQTEKEVEKEVEKRKSAPRAPVPAPTPAP 130
Query: 134 SAPAVLPPSAEVQPTP 87
A P+A Q P
Sbjct: 131 QAAPQATPAAPAQAYP 146
>AY741200-1|AAU89102.1| 596|Caenorhabditis elegans STE20-like
serine/threonine kinase protein.
Length = 596
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/67 (29%), Positives = 27/67 (40%)
Frame = -1
Query: 305 AAHKVKNVQKRFARHVVTVDSTDNRTALASTLKEILSDTMEKNKRPVSPEPRPPSTVSAP 126
AAH N + + T +T T TL I S + +P P P PP VS+P
Sbjct: 23 AAHSAANASTITSEYSTTQTTTG--TFNTDTLSSIGSTSTLHGSQPSQPPPPPPPQVSSP 80
Query: 125 AVLPPSA 105
+A
Sbjct: 81 IAAAAAA 87
>AL132898-15|CAC14417.2| 596|Caenorhabditis elegans Hypothetical
protein Y59A8B.23 protein.
Length = 596
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/67 (29%), Positives = 27/67 (40%)
Frame = -1
Query: 305 AAHKVKNVQKRFARHVVTVDSTDNRTALASTLKEILSDTMEKNKRPVSPEPRPPSTVSAP 126
AAH N + + T +T T TL I S + +P P P PP VS+P
Sbjct: 23 AAHSAANASTITSEYSTTQTTTG--TFNTDTLSSIGSTSTLHGSQPSQPPPPPPPQVSSP 80
Query: 125 AVLPPSA 105
+A
Sbjct: 81 IAAAAAA 87
>AF078790-10|AAC26931.1| 197|Caenorhabditis elegans Hypothetical
protein F36H12.5 protein.
Length = 197
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 6/46 (13%)
Frame = -1
Query: 182 KNKRPVSPEPRPPSTVSA------PAVLPPSAEVQPTPDTADEGNK 63
K K+P + P P S++S+ PA PP E + P+T +E K
Sbjct: 27 KAKKPKAAAPNPISSISSNSKVAPPASPPPPPEAEKKPETGEEPKK 72
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/62 (30%), Positives = 24/62 (38%)
Frame = -1
Query: 257 VTVDSTDNRTALASTLKEILSDTMEKNKRPVSPEPRPPSTVSAPAVLPPSAEVQPTPDTA 78
VT + T T A E K P + + PP T AP PP+ + P P T
Sbjct: 156 VTPEPTVKNTTAAEPTTEAPPPPTTKAPPPPTTKAPPPPTTKAPP--PPTTKAPPPPTTN 213
Query: 77 DE 72
E
Sbjct: 214 KE 215
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = -1
Query: 260 VVTVDSTDNRTALASTLKEILSDTMEKNKRPVS--PEPRPPSTVSAPAVLPPSAEVQPTP 87
VV VD + L++ + +T + + P + P P+PPS PPS E +P P
Sbjct: 547 VVIVDPATSEEPLSTASTALPDETTDAPEEPATEVPNPQPPS--------PPSPEPEPEP 598
Query: 86 DTADE 72
+ E
Sbjct: 599 KSTPE 603
>Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical
protein R09E10.9 protein.
Length = 443
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 167 VSPEPRPPSTVSAPAVLPPSAEVQPTP 87
VSP P P ST P+ +P ++V P P
Sbjct: 336 VSPSPVPVSTPPVPSTIPSPSKVVPNP 362
>X70830-1|CAA50178.1| 534|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 534
Score = 29.5 bits (63), Expect = 3.2
Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Frame = -1
Query: 518 LSQPEAKGFILVGFPRNSRMSDIFSRQVKWPEKVVALEVDNEVAAARLQNKLSELGRPES 339
LS AK F+ + + R + ++V LE N A L + G+ S
Sbjct: 35 LSANAAKSFLEATDKEKKTLQGLNDRLGNYIDRVKKLEEQNRKLVADLDELRGKWGKDTS 94
Query: 338 EI--------NAARQIIRDAAHKVKNVQKRFARH 261
EI + AR+ I DAA + V + ARH
Sbjct: 95 EIKIKYSESLSTARKDIDDAARRKAEVDVKVARH 128
>U50309-6|AAG24134.1| 247|Caenorhabditis elegans Hypothetical
protein F58G4.3 protein.
Length = 247
Score = 29.5 bits (63), Expect = 3.2
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = -1
Query: 428 PEKVVALEVDNEVAAARLQNKLSELGRPESEI-NAARQIIRDAAHKVKNVQKRFARHVVT 252
PE L NE+ L +KL+EL P+ +I N +++I + + +KN+ K+ + +
Sbjct: 116 PEVKSLLAKANEIEIDELISKLNELV-PQVKIGNLLKKLISEVSKLIKNLLKKVGKIIKK 174
Query: 251 VDSTDNRTALASTLKEILSDTMEKNK 174
V + + L +K EKN+
Sbjct: 175 VGAVFEK--LTKIIKNTTKTIEEKNE 198
>U49831-7|AAA93408.1| 558|Caenorhabditis elegans Intermediate
filament, b protein1, isoform a protein.
Length = 558
Score = 29.5 bits (63), Expect = 3.2
Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Frame = -1
Query: 518 LSQPEAKGFILVGFPRNSRMSDIFSRQVKWPEKVVALEVDNEVAAARLQNKLSELGRPES 339
LS AK F+ + + R + ++V LE N A L + G+ S
Sbjct: 35 LSANAAKSFLEATDKEKKTLQGLNDRLGNYIDRVKKLEEQNRKLVADLDELRGKWGKDTS 94
Query: 338 EI--------NAARQIIRDAAHKVKNVQKRFARH 261
EI + AR+ I DAA + V + ARH
Sbjct: 95 EIKIKYSESLSTARKDIDDAARRKAEVDVKVARH 128
>U49831-6|AAA93407.1| 589|Caenorhabditis elegans Intermediate
filament, b protein1, isoform b protein.
Length = 589
Score = 29.5 bits (63), Expect = 3.2
Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Frame = -1
Query: 518 LSQPEAKGFILVGFPRNSRMSDIFSRQVKWPEKVVALEVDNEVAAARLQNKLSELGRPES 339
LS AK F+ + + R + ++V LE N A L + G+ S
Sbjct: 66 LSANAAKSFLEATDKEKKTLQGLNDRLGNYIDRVKKLEEQNRKLVADLDELRGKWGKDTS 125
Query: 338 EI--------NAARQIIRDAAHKVKNVQKRFARH 261
EI + AR+ I DAA + V + ARH
Sbjct: 126 EIKIKYSESLSTARKDIDDAARRKAEVDVKVARH 159
>AC024090-8|AAF35422.2| 649|Caenorhabditis elegans Hypothetical
protein C52E2.8 protein.
Length = 649
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = -1
Query: 218 STLKEILSDTMEKNKRPVSPEPRPPSTVSAPAVLPPSAEVQPTPDTAD 75
S LK ++ P P PPSTV +LPP+ E P D D
Sbjct: 600 SLLKVVIFIAFTPRDAP-GPFELPPSTVLHLHILPPTKETPPAVDAVD 646
>Z81048-4|CAB02844.1| 219|Caenorhabditis elegans Hypothetical
protein C41G7.6 protein.
Length = 219
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -1
Query: 182 KNKRPVSPEPRPPSTVSAPAVLPPSAEVQPTPDTADEGNK 63
K P +P P PP+ AP V P +A P +G+K
Sbjct: 37 KMTAPTAPAPAPPAAPDAPPVAPDAA-AAPADGEKKDGDK 75
>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
protein F49E2.5j protein.
Length = 1100
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = -1
Query: 293 VKNVQKRFARHVVTVDSTDNRTALASTLKEILSDTMEKNKRPVSPEPRPPSTVSAPAVLP 114
V+NV + T +T+N+ K+ S++ + ++PV P PP P
Sbjct: 357 VENVVENVVEKSTTPPATENKKKNKKDKKK--SESEKVTEQPVESAPAPPQVEQVVETTP 414
Query: 113 PSAE 102
P++E
Sbjct: 415 PASE 418
>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5i protein.
Length = 1030
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = -1
Query: 293 VKNVQKRFARHVVTVDSTDNRTALASTLKEILSDTMEKNKRPVSPEPRPPSTVSAPAVLP 114
V+NV + T +T+N+ K+ S++ + ++PV P PP P
Sbjct: 357 VENVVENVVEKSTTPPATENKKKNKKDKKK--SESEKVTEQPVESAPAPPQVEQVVETTP 414
Query: 113 PSAE 102
P++E
Sbjct: 415 PASE 418
>Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical
protein F49E2.5f protein.
Length = 611
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = -1
Query: 293 VKNVQKRFARHVVTVDSTDNRTALASTLKEILSDTMEKNKRPVSPEPRPPSTVSAPAVLP 114
V+NV + T +T+N+ K+ S++ + ++PV P PP P
Sbjct: 357 VENVVENVVEKSTTPPATENKKKNKKDKKK--SESEKVTEQPVESAPAPPQVEQVVETTP 414
Query: 113 PSAE 102
P++E
Sbjct: 415 PASE 418
>Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical
protein F49E2.5e protein.
Length = 581
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = -1
Query: 293 VKNVQKRFARHVVTVDSTDNRTALASTLKEILSDTMEKNKRPVSPEPRPPSTVSAPAVLP 114
V+NV + T +T+N+ K+ S++ + ++PV P PP P
Sbjct: 357 VENVVENVVEKSTTPPATENKKKNKKDKKK--SESEKVTEQPVESAPAPPQVEQVVETTP 414
Query: 113 PSAE 102
P++E
Sbjct: 415 PASE 418
>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical
protein F49E2.5a protein.
Length = 1215
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = -1
Query: 293 VKNVQKRFARHVVTVDSTDNRTALASTLKEILSDTMEKNKRPVSPEPRPPSTVSAPAVLP 114
V+NV + T +T+N+ K+ S++ + ++PV P PP P
Sbjct: 357 VENVVENVVEKSTTPPATENKKKNKKDKKK--SESEKVTEQPVESAPAPPQVEQVVETTP 414
Query: 113 PSAE 102
P++E
Sbjct: 415 PASE 418
>Z70750-13|CAA94745.2| 679|Caenorhabditis elegans Hypothetical
protein C50F4.11 protein.
Length = 679
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/81 (20%), Positives = 34/81 (41%)
Frame = -1
Query: 308 DAAHKVKNVQKRFARHVVTVDSTDNRTALASTLKEILSDTMEKNKRPVSPEPRPPSTVSA 129
D A + + ++ F+ V +N + S E+ ++ +EK K+ + V +
Sbjct: 413 DCARRNERLEDAFSSERVRSQDLENEKSRLSEQLELSNNELEKVKKQLEESQSQLDEVLS 472
Query: 128 PAVLPPSAEVQPTPDTADEGN 66
+ P++E P D GN
Sbjct: 473 MTLTVPASEPASLPAPTDAGN 493
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -1
Query: 185 EKNKRPVSPEPRPPSTVSAPAVLPPSAEVQPTPDTADE 72
E+ + P P P PP +S+P P A VQPTP +E
Sbjct: 1223 ERLESPPLPPP-PPEVLSSPPK-SPVASVQPTPRDLEE 1258
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -1
Query: 185 EKNKRPVSPEPRPPSTVSAPAVLPPSAEVQPTPDTADE 72
E+ + P P P PP +S+P P A VQPTP +E
Sbjct: 1245 ERLESPPLPPP-PPEVLSSPPK-SPVASVQPTPRDLEE 1280
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -1
Query: 185 EKNKRPVSPEPRPPSTVSAPAVLPPSAEVQPTPDTADE 72
E+ + P P P PP +S+P P A VQPTP +E
Sbjct: 1036 ERLESPPLPPP-PPEVLSSPPK-SPVASVQPTPRDLEE 1071
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -1
Query: 185 EKNKRPVSPEPRPPSTVSAPAVLPPSAEVQPTPDTADE 72
E+ + P P P PP +S+P P A VQPTP +E
Sbjct: 1343 ERLESPPLPPP-PPEVLSSPPK-SPVASVQPTPRDLEE 1378
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -1
Query: 185 EKNKRPVSPEPRPPSTVSAPAVLPPSAEVQPTPDTADE 72
E+ + P P P PP +S+P P A VQPTP +E
Sbjct: 1223 ERLESPPLPPP-PPEVLSSPPK-SPVASVQPTPRDLEE 1258
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -1
Query: 185 EKNKRPVSPEPRPPSTVSAPAVLPPSAEVQPTPDTADE 72
E+ + P P P PP +S+P P A VQPTP +E
Sbjct: 1245 ERLESPPLPPP-PPEVLSSPPK-SPVASVQPTPRDLEE 1280
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -1
Query: 185 EKNKRPVSPEPRPPSTVSAPAVLPPSAEVQPTPDTADE 72
E+ + P P P PP +S+P P A VQPTP +E
Sbjct: 1036 ERLESPPLPPP-PPEVLSSPPK-SPVASVQPTPRDLEE 1071
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -1
Query: 185 EKNKRPVSPEPRPPSTVSAPAVLPPSAEVQPTPDTADE 72
E+ + P P P PP +S+P P A VQPTP +E
Sbjct: 1343 ERLESPPLPPP-PPEVLSSPPK-SPVASVQPTPRDLEE 1378
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical protein
C52A11.4c protein.
Length = 2202
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -1
Query: 185 EKNKRPVSPEPRPPSTVSAPAVLPPSAEVQPTPDTADE 72
E+ + P P P PP +S+P P A VQPTP +E
Sbjct: 1054 ERLESPPLPPP-PPEVLSSPPK-SPVASVQPTPRDLEE 1089
>U97552-5|AAQ01520.1| 605|Caenorhabditis elegans Hypothetical
protein W05H7.4a protein.
Length = 605
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = -1
Query: 236 NRTALASTLKEILSDTMEKNKRPVSPEPRPPSTVSAPAVLPPSAEVQPT 90
+R L S LKE+L+ K K VS + P T SAP + P A T
Sbjct: 308 SRFELPSNLKEMLNQL--KKKGFVSSDETPSPTTSAPPPVDPLAAAMQT 354
>U97552-4|AAX55684.1| 666|Caenorhabditis elegans Hypothetical
protein W05H7.4e protein.
Length = 666
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = -1
Query: 236 NRTALASTLKEILSDTMEKNKRPVSPEPRPPSTVSAPAVLPPSAEVQPT 90
+R L S LKE+L+ K K VS + P T SAP + P A T
Sbjct: 369 SRFELPSNLKEMLNQL--KKKGFVSSDETPSPTTSAPPPVDPLAAAMQT 415
>U97552-3|AAQ01521.1| 663|Caenorhabditis elegans Hypothetical
protein W05H7.4b protein.
Length = 663
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = -1
Query: 236 NRTALASTLKEILSDTMEKNKRPVSPEPRPPSTVSAPAVLPPSAEVQPT 90
+R L S LKE+L+ K K VS + P T SAP + P A T
Sbjct: 366 SRFELPSNLKEMLNQL--KKKGFVSSDETPSPTTSAPPPVDPLAAAMQT 412
>U21308-15|AAB93316.2| 412|Caenorhabditis elegans Hypothetical
protein ZK1290.10 protein.
Length = 412
Score = 28.7 bits (61), Expect = 5.5
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = -1
Query: 158 EPRPPSTVSAPAVLPPSAEVQP 93
EP+PP+++++ PPSA+V P
Sbjct: 83 EPQPPASLTSLPAAPPSAQVAP 104
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -1
Query: 185 EKNKRPVSPEPRPPSTVSAPAVLPPSAEVQPTPDTADE 72
E+ + P P P PP +S+P P A VQPTP +E
Sbjct: 1014 ERLESPPLPPP-PPEVLSSPPK-SPVASVQPTPRDLEE 1049
>AF239998-1|AAF63494.1| 679|Caenorhabditis elegans MDF-1 protein.
Length = 679
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/81 (20%), Positives = 34/81 (41%)
Frame = -1
Query: 308 DAAHKVKNVQKRFARHVVTVDSTDNRTALASTLKEILSDTMEKNKRPVSPEPRPPSTVSA 129
D A + + ++ F+ V +N + S E+ ++ +EK K+ + V +
Sbjct: 413 DCARRNERLEDAFSSERVRSQDLENEKSRLSEQLELSNNELEKVKKQLEESQSQLDEVLS 472
Query: 128 PAVLPPSAEVQPTPDTADEGN 66
+ P++E P D GN
Sbjct: 473 MTLTVPASEPASLPAPTDAGN 493
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1
Query: 179 NKRPVSPEPRPPSTVSAPAVLPPSAEVQPTP 87
N +P+S P PP PA PPS+ TP
Sbjct: 818 NSQPLSTLPPPPPPNPPPAPQPPSSAASLTP 848
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = -1
Query: 257 VTVDSTDNRTALASTLKEILSDTMEKNKRPVSPEPRPPSTVSAPAVLPPSAEVQP 93
VT ST+N ST L + + P P+ PP + AP +P A P
Sbjct: 945 VTPTSTNNHEIAQSTRSPALPPPVPPREAPPIPKRNPP-PLGAPPKVPEGARAPP 998
>U58735-4|AAC48144.1| 479|Caenorhabditis elegans Hypothetical
protein F20B4.3 protein.
Length = 479
Score = 28.3 bits (60), Expect = 7.3
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = -1
Query: 635 LERVEATRDTVRGRMVAEKIRTLE---DLPEQLTVDLIKEEMLSQ 510
LE V DT RG + E+ RTL+ PEQ+ +DLI ++L Q
Sbjct: 330 LESVFGKGDTQRGLL--EQFRTLKFNHSNPEQMKLDLISHQLLVQ 372
>U56963-8|AAB38121.1| 155|Caenorhabditis elegans Hypothetical
protein T13A10.1 protein.
Length = 155
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -1
Query: 182 KNKRPVSPEPRPPSTVSAPAVLPPSAEVQPTPDTADEGNK 63
K K+P + P+P S++S+ + + P A P P+ + K
Sbjct: 27 KAKKPKATAPKPISSISSNSKVAPPAPPPPPPEAEKKPEK 66
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = -1
Query: 257 VTVDSTDNRTALASTLKEILSDTMEKNKRPVSPEPRPPSTVSAPAVLPPSAEVQP 93
VT ST+N ST L + + P P+ PP + AP +P A P
Sbjct: 945 VTPTSTNNHEIAQSTRSPALPPPVPPREAPPIPKRNPP-PLGAPPKVPEGARAPP 998
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = -1
Query: 257 VTVDSTDNRTALASTLKEILSDTMEKNKRPVSPEPRPPSTVSAPAVLPPSAEVQP 93
VT ST+N ST L + + P P+ PP + AP +P A P
Sbjct: 945 VTPTSTNNHEIAQSTRSPALPPPVPPREAPPIPKRNPP-PLGAPPKVPEGARAPP 998
>AC084158-18|AAK68583.1| 300|Caenorhabditis elegans Hypothetical
protein Y69A2AR.9 protein.
Length = 300
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = -1
Query: 254 TVDSTDNRTALASTLKEILSDTMEKNKRPVSPEPRPPSTVSAPAVLPPSAEVQPTP 87
T ST+ T +T E S T + N P +P P P S+P+ +AE PTP
Sbjct: 111 TASSTEATTFSTTTSDEKTSTTEKTNPGP-APGPGPGPFASSPSPKDVTAEA-PTP 164
>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
protein C09E7.8b protein.
Length = 1080
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/64 (21%), Positives = 32/64 (50%)
Frame = -1
Query: 362 SELGRPESEINAARQIIRDAAHKVKNVQKRFARHVVTVDSTDNRTALASTLKEILSDTME 183
SE E+N + ++++ ++KN+Q+ + + ++DN+T ++ L D
Sbjct: 576 SECNDVRMEMNTVKDVLQNVQKQLKNMQQNSEQFETKLVASDNKT---KNFEKQLEDERR 632
Query: 182 KNKR 171
KN +
Sbjct: 633 KNNK 636
>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
protein C09E7.8a protein.
Length = 1114
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/64 (21%), Positives = 32/64 (50%)
Frame = -1
Query: 362 SELGRPESEINAARQIIRDAAHKVKNVQKRFARHVVTVDSTDNRTALASTLKEILSDTME 183
SE E+N + ++++ ++KN+Q+ + + ++DN+T ++ L D
Sbjct: 610 SECNDVRMEMNTVKDVLQNVQKQLKNMQQNSEQFETKLVASDNKT---KNFEKQLEDERR 666
Query: 182 KNKR 171
KN +
Sbjct: 667 KNNK 670
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 9/41 (21%)
Frame = -1
Query: 176 KRPVSPEPRPPSTVSAPA---------VLPPSAEVQPTPDT 81
K+P P PPS SAP V+ PS QPTP T
Sbjct: 848 KQPRYGTPAPPSRASAPTPQPLSSTMPVVAPSTSTQPTPTT 888
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = -1
Query: 467 SRMSDIFSRQVKWPEKVVALEVDNEVAAARLQNKLSELGRPESEINAARQIIRDAAHKVK 288
S +SDI + EK E+DN+ + L +L R E + + +RD+ + +
Sbjct: 1184 SAISDILDKYRSAEEKANKGELDNQRLRSDLATVTLKLERQELKAKDSDNRLRDSQKRFE 1243
Query: 287 NVQKRFA 267
VQ + A
Sbjct: 1244 EVQSKLA 1250
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = -1
Query: 467 SRMSDIFSRQVKWPEKVVALEVDNEVAAARLQNKLSELGRPESEINAARQIIRDAAHKVK 288
S +SDI + EK E+DN+ + L +L R E + + +RD+ + +
Sbjct: 1184 SAISDILDKYRSAEEKANKGELDNQRLRSDLATVTLKLERQELKAKDSDNRLRDSQKRFE 1243
Query: 287 NVQKRFA 267
VQ + A
Sbjct: 1244 EVQSKLA 1250
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = -1
Query: 467 SRMSDIFSRQVKWPEKVVALEVDNEVAAARLQNKLSELGRPESEINAARQIIRDAAHKVK 288
S +SDI + EK E+DN+ + L +L R E + + +RD+ + +
Sbjct: 944 SAISDILDKYRSAEEKANKGELDNQRLRSDLATVTLKLERQELKAKDSDNRLRDSQKRFE 1003
Query: 287 NVQKRFA 267
VQ + A
Sbjct: 1004 EVQSKLA 1010
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = -1
Query: 467 SRMSDIFSRQVKWPEKVVALEVDNEVAAARLQNKLSELGRPESEINAARQIIRDAAHKVK 288
S +SDI + EK E+DN+ + L +L R E + + +RD+ + +
Sbjct: 1184 SAISDILDKYRSAEEKANKGELDNQRLRSDLATVTLKLERQELKAKDSDNRLRDSQKRFE 1243
Query: 287 NVQKRFA 267
VQ + A
Sbjct: 1244 EVQSKLA 1250
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 185 EKNKRPVSPEPRPPSTVSAPAVLPPSAEVQPTPDTADE 72
E +K P P P PP ++ P+ +PP P P A E
Sbjct: 491 EVSKSPPPPPPLPP--IATPSSVPPPPPPPPPPPPALE 526
>AC024748-2|AAF60412.1| 236|Caenorhabditis elegans Hypothetical
protein Y110A2AR.3a protein.
Length = 236
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -1
Query: 191 TMEKNKRPVSPEPRPPSTVSAPAVLPPSAEVQPTPDTADEGN 66
+M +N RP + S++S+ PP A T TA GN
Sbjct: 191 SMIRNSRPSTTTTTASSSLSSAFAAPPPAPSSSTSTTATSGN 232
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,229,820
Number of Sequences: 27780
Number of extensions: 383201
Number of successful extensions: 2086
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 1677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2046
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -