Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11a18
(816 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L54057-1|AAA88022.1| 142|Homo sapiens CLP protein. 116 8e-26
BT006968-1|AAP35614.1| 142|Homo sapiens coactosin-like 1 (Dicty... 116 8e-26
BC053682-1|AAH53682.1| 142|Homo sapiens coactosin-like 1 (Dicty... 116 8e-26
BC042970-1|AAH42970.1| 142|Homo sapiens coactosin-like 1 (Dicty... 116 8e-26
BC016702-1|AAH16702.1| 142|Homo sapiens coactosin-like 1 (Dicty... 116 8e-26
BC010884-1|AAH10884.1| 142|Homo sapiens coactosin-like 1 (Dicty... 116 8e-26
BC010039-1|AAH10039.1| 142|Homo sapiens coactosin-like 1 (Dicty... 116 8e-26
AF250287-1|AAF81273.1| 430|Homo sapiens cervical SH3P7 protein. 45 3e-04
AF151364-1|AAG13120.1| 430|Homo sapiens mucin-associated protei... 45 3e-04
CR457167-1|CAG33448.1| 430|Homo sapiens HIP-55 protein. 44 7e-04
BC031687-1|AAH31687.1| 430|Homo sapiens drebrin-like protein. 44 7e-04
BC011677-1|AAH11677.1| 431|Homo sapiens drebrin-like protein. 44 7e-04
AK027367-1|BAB55065.1| 439|Homo sapiens protein ( Homo sapiens ... 44 7e-04
AF218020-1|AAG17262.2| 430|Homo sapiens unknown protein. 44 7e-04
AF197060-1|AAF13701.1| 430|Homo sapiens src homology 3 domain-c... 44 7e-04
AF077353-1|AAF80228.1| 430|Homo sapiens drebrin F protein. 44 7e-04
>L54057-1|AAA88022.1| 142|Homo sapiens CLP protein.
Length = 142
Score = 116 bits (280), Expect = 8e-26
Identities = 49/112 (43%), Positives = 73/112 (65%)
Frame = -1
Query: 801 WAVFKFEGARIVCSARGSDFTEFRTQFSDDERAFGYLRLQMGDEMSKRKKFMFMTWVGPN 622
W FK++G+ IV +G+++ F Q +DD R F ++R GD MSKR KF +TW+G N
Sbjct: 26 WVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAFVRFTTGDAMSKRSKFALITWIGEN 85
Query: 621 VSVINRAKMSTDKAIIKDIISNFAVELQLENQSEIDIDQFKDALNRAGGANY 466
VS + RAK TDK ++K+++ NFA E + ++ E++ D K L +AGGANY
Sbjct: 86 VSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELEEDFIKSELKKAGGANY 137
>BT006968-1|AAP35614.1| 142|Homo sapiens coactosin-like 1
(Dictyostelium) protein.
Length = 142
Score = 116 bits (280), Expect = 8e-26
Identities = 49/112 (43%), Positives = 73/112 (65%)
Frame = -1
Query: 801 WAVFKFEGARIVCSARGSDFTEFRTQFSDDERAFGYLRLQMGDEMSKRKKFMFMTWVGPN 622
W FK++G+ IV +G+++ F Q +DD R F ++R GD MSKR KF +TW+G N
Sbjct: 26 WVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAFVRFTTGDAMSKRSKFALITWIGEN 85
Query: 621 VSVINRAKMSTDKAIIKDIISNFAVELQLENQSEIDIDQFKDALNRAGGANY 466
VS + RAK TDK ++K+++ NFA E + ++ E++ D K L +AGGANY
Sbjct: 86 VSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELEEDFIKSELKKAGGANY 137
>BC053682-1|AAH53682.1| 142|Homo sapiens coactosin-like 1
(Dictyostelium) protein.
Length = 142
Score = 116 bits (280), Expect = 8e-26
Identities = 49/112 (43%), Positives = 73/112 (65%)
Frame = -1
Query: 801 WAVFKFEGARIVCSARGSDFTEFRTQFSDDERAFGYLRLQMGDEMSKRKKFMFMTWVGPN 622
W FK++G+ IV +G+++ F Q +DD R F ++R GD MSKR KF +TW+G N
Sbjct: 26 WVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAFVRFTTGDAMSKRSKFALITWIGEN 85
Query: 621 VSVINRAKMSTDKAIIKDIISNFAVELQLENQSEIDIDQFKDALNRAGGANY 466
VS + RAK TDK ++K+++ NFA E + ++ E++ D K L +AGGANY
Sbjct: 86 VSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELEEDFIKSELKKAGGANY 137
>BC042970-1|AAH42970.1| 142|Homo sapiens coactosin-like 1
(Dictyostelium) protein.
Length = 142
Score = 116 bits (280), Expect = 8e-26
Identities = 49/112 (43%), Positives = 73/112 (65%)
Frame = -1
Query: 801 WAVFKFEGARIVCSARGSDFTEFRTQFSDDERAFGYLRLQMGDEMSKRKKFMFMTWVGPN 622
W FK++G+ IV +G+++ F Q +DD R F ++R GD MSKR KF +TW+G N
Sbjct: 26 WVTFKYDGSTIVHGEQGAEYQHFIQQCTDDVRLFAFVRFTTGDAMSKRSKFALITWIGEN 85
Query: 621 VSVINRAKMSTDKAIIKDIISNFAVELQLENQSEIDIDQFKDALNRAGGANY 466
VS + RAK TDK ++K+++ NFA E + ++ E++ D K L +AGGANY
Sbjct: 86 VSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELEEDFIKSELKKAGGANY 137
>BC016702-1|AAH16702.1| 142|Homo sapiens coactosin-like 1
(Dictyostelium) protein.
Length = 142
Score = 116 bits (280), Expect = 8e-26
Identities = 49/112 (43%), Positives = 73/112 (65%)
Frame = -1
Query: 801 WAVFKFEGARIVCSARGSDFTEFRTQFSDDERAFGYLRLQMGDEMSKRKKFMFMTWVGPN 622
W FK++G+ IV +G+++ F Q +DD R F ++R GD MSKR KF +TW+G N
Sbjct: 26 WVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAFVRFTTGDAMSKRSKFALITWIGEN 85
Query: 621 VSVINRAKMSTDKAIIKDIISNFAVELQLENQSEIDIDQFKDALNRAGGANY 466
VS + RAK TDK ++K+++ NFA E + ++ E++ D K L +AGGANY
Sbjct: 86 VSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELEEDFIKSELKKAGGANY 137
>BC010884-1|AAH10884.1| 142|Homo sapiens coactosin-like 1
(Dictyostelium) protein.
Length = 142
Score = 116 bits (280), Expect = 8e-26
Identities = 49/112 (43%), Positives = 73/112 (65%)
Frame = -1
Query: 801 WAVFKFEGARIVCSARGSDFTEFRTQFSDDERAFGYLRLQMGDEMSKRKKFMFMTWVGPN 622
W FK++G+ IV +G+++ F Q +DD R F ++R GD MSKR KF +TW+G N
Sbjct: 26 WVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAFVRFTTGDAMSKRSKFALITWIGEN 85
Query: 621 VSVINRAKMSTDKAIIKDIISNFAVELQLENQSEIDIDQFKDALNRAGGANY 466
VS + RAK TDK ++K+++ NFA E + ++ E++ D K L +AGGANY
Sbjct: 86 VSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELEEDFIKSELKKAGGANY 137
>BC010039-1|AAH10039.1| 142|Homo sapiens coactosin-like 1
(Dictyostelium) protein.
Length = 142
Score = 116 bits (280), Expect = 8e-26
Identities = 49/112 (43%), Positives = 73/112 (65%)
Frame = -1
Query: 801 WAVFKFEGARIVCSARGSDFTEFRTQFSDDERAFGYLRLQMGDEMSKRKKFMFMTWVGPN 622
W FK++G+ IV +G+++ F Q +DD R F ++R GD MSKR KF +TW+G N
Sbjct: 26 WVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAFVRFTTGDAMSKRSKFALITWIGEN 85
Query: 621 VSVINRAKMSTDKAIIKDIISNFAVELQLENQSEIDIDQFKDALNRAGGANY 466
VS + RAK TDK ++K+++ NFA E + ++ E++ D K L +AGGANY
Sbjct: 86 VSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELEEDFIKSELKKAGGANY 137
>AF250287-1|AAF81273.1| 430|Homo sapiens cervical SH3P7 protein.
Length = 430
Score = 45.2 bits (102), Expect = 3e-04
Identities = 25/120 (20%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Frame = -1
Query: 813 TPTEWAVFKFEG----ARIVCSARGSDFTEFRTQFSDDERAFGYLRLQMGDEMSKRKKFM 646
+PT+WA+F +EG R+ + G E + + + + + R++ D S KF+
Sbjct: 24 SPTDWALFTYEGNSNDIRVAGTGEGG-LEEMVEELNSGKVMYAFCRVK--DPNSGLPKFV 80
Query: 645 FMTWVGPNVSVINRAKMSTDKAIIKDIISNFAVELQLENQSEIDIDQFKDALNRAGGANY 466
+ W G V+ + + S+ + + + V + + +++ + + + +A GANY
Sbjct: 81 LINWTGEGVNDVRKGACSSHVSTMASFLKGAHVTINARAEEDVEPECIMEKVAKASGANY 140
>AF151364-1|AAG13120.1| 430|Homo sapiens mucin-associated protein
protein.
Length = 430
Score = 45.2 bits (102), Expect = 3e-04
Identities = 25/120 (20%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Frame = -1
Query: 813 TPTEWAVFKFEG----ARIVCSARGSDFTEFRTQFSDDERAFGYLRLQMGDEMSKRKKFM 646
+PT+WA+F +EG R+ + G E + + + + + R++ D S KF+
Sbjct: 24 SPTDWALFTYEGNSNDIRVAGTGEGG-LEEMVEELNSGKVMYAFCRVK--DPNSGLPKFV 80
Query: 645 FMTWVGPNVSVINRAKMSTDKAIIKDIISNFAVELQLENQSEIDIDQFKDALNRAGGANY 466
+ W G V+ + + S+ + + + V + + +++ + + + +A GANY
Sbjct: 81 LINWTGEGVNDVRKGACSSHVSTMASFLKGAHVTINARAEEDVEPECIMEKVAKASGANY 140
>CR457167-1|CAG33448.1| 430|Homo sapiens HIP-55 protein.
Length = 430
Score = 44.0 bits (99), Expect = 7e-04
Identities = 24/120 (20%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Frame = -1
Query: 813 TPTEWAVFKFEG----ARIVCSARGSDFTEFRTQFSDDERAFGYLRLQMGDEMSKRKKFM 646
+PT+WA+F +EG R+ + G E + + + + + R++ D S KF+
Sbjct: 24 SPTDWALFTYEGNSNDIRVAGTGEGG-LEEMVEELNSGKVMYAFCRVK--DPNSGLPKFV 80
Query: 645 FMTWVGPNVSVINRAKMSTDKAIIKDIISNFAVELQLENQSEIDIDQFKDALNRAGGANY 466
+ W G V+ + + ++ + + + V + + +++ + + + +A GANY
Sbjct: 81 LINWTGEGVNDVRKGACASHVSTMASFLKGAHVTINARAEEDVEPECIMEKVAKASGANY 140
>BC031687-1|AAH31687.1| 430|Homo sapiens drebrin-like protein.
Length = 430
Score = 44.0 bits (99), Expect = 7e-04
Identities = 24/120 (20%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Frame = -1
Query: 813 TPTEWAVFKFEG----ARIVCSARGSDFTEFRTQFSDDERAFGYLRLQMGDEMSKRKKFM 646
+PT+WA+F +EG R+ + G E + + + + + R++ D S KF+
Sbjct: 24 SPTDWALFTYEGNSNDIRVAGTGEGG-LEEMVEELNSGKVMYAFCRVK--DPNSGLPKFV 80
Query: 645 FMTWVGPNVSVINRAKMSTDKAIIKDIISNFAVELQLENQSEIDIDQFKDALNRAGGANY 466
+ W G V+ + + ++ + + + V + + +++ + + + +A GANY
Sbjct: 81 LINWTGEGVNDVRKGACASHVSTMASFLKGAHVTINARAEEDVEPECIMEKVAKASGANY 140
>BC011677-1|AAH11677.1| 431|Homo sapiens drebrin-like protein.
Length = 431
Score = 44.0 bits (99), Expect = 7e-04
Identities = 24/120 (20%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Frame = -1
Query: 813 TPTEWAVFKFEG----ARIVCSARGSDFTEFRTQFSDDERAFGYLRLQMGDEMSKRKKFM 646
+PT+WA+F +EG R+ + G E + + + + + R++ D S KF+
Sbjct: 24 SPTDWALFTYEGNSNDIRVAGTGEGG-LEEMVEELNSGKVMYAFCRVK--DPNSGLPKFV 80
Query: 645 FMTWVGPNVSVINRAKMSTDKAIIKDIISNFAVELQLENQSEIDIDQFKDALNRAGGANY 466
+ W G V+ + + ++ + + + V + + +++ + + + +A GANY
Sbjct: 81 LINWTGEGVNDVRKGACASHVSTMASFLKGAHVTINARAEEDVEPECIMEKVAKASGANY 140
>AK027367-1|BAB55065.1| 439|Homo sapiens protein ( Homo sapiens
cDNA FLJ14461 fis, clone MAMMA1000173, highly similar to
Homo sapiens src homology 3 domain-containing protein
HIP-55 ).
Length = 439
Score = 44.0 bits (99), Expect = 7e-04
Identities = 24/120 (20%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Frame = -1
Query: 813 TPTEWAVFKFEG----ARIVCSARGSDFTEFRTQFSDDERAFGYLRLQMGDEMSKRKKFM 646
+PT+WA+F +EG R+ + G E + + + + + R++ D S KF+
Sbjct: 24 SPTDWALFTYEGNSNDIRVAGTGEGG-LEEMVEELNSGKVMYAFCRVK--DPNSGLPKFV 80
Query: 645 FMTWVGPNVSVINRAKMSTDKAIIKDIISNFAVELQLENQSEIDIDQFKDALNRAGGANY 466
+ W G V+ + + ++ + + + V + + +++ + + + +A GANY
Sbjct: 81 LINWTGEGVNDVRKGACASHVSTMASFLKGAHVTINARAEEDVEPECIMEKVAKASGANY 140
>AF218020-1|AAG17262.2| 430|Homo sapiens unknown protein.
Length = 430
Score = 44.0 bits (99), Expect = 7e-04
Identities = 24/120 (20%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Frame = -1
Query: 813 TPTEWAVFKFEG----ARIVCSARGSDFTEFRTQFSDDERAFGYLRLQMGDEMSKRKKFM 646
+PT+WA+F +EG R+ + G E + + + + + R++ D S KF+
Sbjct: 24 SPTDWALFTYEGNSNDIRVAGTGEGG-LEEMVEELNSGKVMYAFCRVK--DPNSGLPKFV 80
Query: 645 FMTWVGPNVSVINRAKMSTDKAIIKDIISNFAVELQLENQSEIDIDQFKDALNRAGGANY 466
+ W G V+ + + ++ + + + V + + +++ + + + +A GANY
Sbjct: 81 LINWTGEGVNDVRKGACASHVSTMASFLKGAHVTINARAEEDVEPECIMEKVAKASGANY 140
>AF197060-1|AAF13701.1| 430|Homo sapiens src homology 3
domain-containing protein HIP-55 protein.
Length = 430
Score = 44.0 bits (99), Expect = 7e-04
Identities = 24/120 (20%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Frame = -1
Query: 813 TPTEWAVFKFEG----ARIVCSARGSDFTEFRTQFSDDERAFGYLRLQMGDEMSKRKKFM 646
+PT+WA+F +EG R+ + G E + + + + + R++ D S KF+
Sbjct: 24 SPTDWALFTYEGNSNDIRVAGTGEGG-LEEMVEELNSGKVMYAFCRVK--DPNSGLPKFV 80
Query: 645 FMTWVGPNVSVINRAKMSTDKAIIKDIISNFAVELQLENQSEIDIDQFKDALNRAGGANY 466
+ W G V+ + + ++ + + + V + + +++ + + + +A GANY
Sbjct: 81 LINWTGEGVNDVRKGACASHVSTMASFLKGAHVTINARAEEDVEPECIMEKVAKASGANY 140
>AF077353-1|AAF80228.1| 430|Homo sapiens drebrin F protein.
Length = 430
Score = 44.0 bits (99), Expect = 7e-04
Identities = 24/120 (20%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Frame = -1
Query: 813 TPTEWAVFKFEG----ARIVCSARGSDFTEFRTQFSDDERAFGYLRLQMGDEMSKRKKFM 646
+PT+WA+F +EG R+ + G E + + + + + R++ D S KF+
Sbjct: 24 SPTDWALFTYEGNSNDIRVAGTGEGG-LEEMVEELNSGKVMYAFCRVK--DPNSGLPKFV 80
Query: 645 FMTWVGPNVSVINRAKMSTDKAIIKDIISNFAVELQLENQSEIDIDQFKDALNRAGGANY 466
+ W G V+ + + ++ + + + V + + +++ + + + +A GANY
Sbjct: 81 LINWTGEGVNDVRKGACASHVSTMASFLKGAHVTINARAEEDVEPECIMEKVAKASGANY 140
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,982,560
Number of Sequences: 237096
Number of extensions: 2477370
Number of successful extensions: 8198
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 8088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8189
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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