Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11a14
(852 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M14645-1|AAA28987.1| 450|Drosophila melanogaster protein ( D.me... 124 1e-28
M14644-1|AAA28986.1| 449|Drosophila melanogaster protein ( D.me... 124 1e-28
M14643-1|AAA28985.1| 450|Drosophila melanogaster protein ( D.me... 124 1e-28
BT016118-1|AAV37003.1| 450|Drosophila melanogaster LD07757p pro... 124 1e-28
BT012506-1|AAS93777.1| 450|Drosophila melanogaster AT25469p pro... 124 1e-28
BT003630-1|AAO39634.1| 450|Drosophila melanogaster AT26363p pro... 124 1e-28
AY113631-1|AAM29636.1| 449|Drosophila melanogaster RH71862p pro... 124 1e-28
AY084208-1|AAL89946.1| 450|Drosophila melanogaster SD07763p pro... 124 1e-28
AE014297-1015|AAF54433.1| 449|Drosophila melanogaster CG9476-PA... 124 1e-28
AE014297-627|AAN13341.1| 450|Drosophila melanogaster CG2512-PB,... 124 1e-28
AE014297-626|AAF54007.1| 450|Drosophila melanogaster CG2512-PA,... 124 1e-28
AE014297-554|AAF54067.1| 450|Drosophila melanogaster CG1913-PA ... 124 1e-28
M14646-1|AAA28988.1| 462|Drosophila melanogaster protein ( D.me... 102 7e-22
AE014296-1707|AAF50226.2| 462|Drosophila melanogaster CG8308-PA... 102 7e-22
AY089253-1|AAL89991.1| 455|Drosophila melanogaster AT04270p pro... 71 2e-12
AE014297-2432|AAF55488.1| 455|Drosophila melanogaster CG7794-PA... 71 2e-12
AY118611-1|AAM49980.1| 457|Drosophila melanogaster LP10436p pro... 66 6e-11
AE014297-4213|AAF56770.2| 522|Drosophila melanogaster CG4869-PA... 66 6e-11
X16826-1|CAA34726.1| 435|Drosophila melanogaster 60C beta tubul... 64 2e-10
M22335-1|AAA28993.1| 454|Drosophila melanogaster protein ( D.me... 64 2e-10
BT015991-1|AAV36876.1| 454|Drosophila melanogaster RE53159p pro... 64 2e-10
AE013599-3851|AAF47193.2| 454|Drosophila melanogaster CG3401-PA... 64 2e-10
M20420-1|AAA28991.1| 446|Drosophila melanogaster protein ( D.me... 64 3e-10
AY118725-1|AAM50585.1| 446|Drosophila melanogaster GH02051p pro... 64 3e-10
AE014297-930|AAF54373.1| 446|Drosophila melanogaster CG9359-PA ... 64 3e-10
M20419-1|AAA28989.1| 447|Drosophila melanogaster protein ( D.me... 63 4e-10
BT003242-1|AAO24999.1| 447|Drosophila melanogaster LD43681p pro... 63 4e-10
AE013599-2894|AAN16132.2| 375|Drosophila melanogaster CG9277-PD... 63 4e-10
AE013599-2893|AAN16133.1| 375|Drosophila melanogaster CG9277-PC... 63 4e-10
AE013599-2892|AAF57556.1| 456|Drosophila melanogaster CG9277-PA... 63 4e-10
AE013599-2891|AAF57555.1| 447|Drosophila melanogaster CG9277-PB... 63 4e-10
AY089468-1|AAL90206.1| 462|Drosophila melanogaster AT27896p pro... 53 6e-07
AE014296-1121|AAF50659.1| 462|Drosophila melanogaster CG32396-P... 53 6e-07
AY060858-1|AAL28406.1| 607|Drosophila melanogaster GM03282p pro... 29 6.1
AE014134-533|AAF51166.1| 607|Drosophila melanogaster CG17265-PA... 29 6.1
>M14645-1|AAA28987.1| 450|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-3), complete
cds. ).
Length = 450
Score = 124 bits (300), Expect = 1e-28
Identities = 56/72 (77%), Positives = 66/72 (91%), Gaps = 1/72 (1%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
LSNTTAIAEAW +LDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DY+EV +
Sbjct: 378 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGM 437
Query: 670 ETSDMQ-PGADD 638
++ D + GA++
Sbjct: 438 DSGDGEGEGAEE 449
>M14644-1|AAA28986.1| 449|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-2), complete
cds. ).
Length = 449
Score = 124 bits (300), Expect = 1e-28
Identities = 57/72 (79%), Positives = 65/72 (90%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
LSNTTAIAEAW +LDHKFDLMY+KRAFVHWYVGEGMEEGEF+EAREDLAALE+DY+EV I
Sbjct: 378 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFAEAREDLAALEKDYEEVGI 437
Query: 670 ETSDMQPGADDE 635
+ S + G D+E
Sbjct: 438 D-STTELGEDEE 448
>M14643-1|AAA28985.1| 450|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-1), complete
cds. ).
Length = 450
Score = 124 bits (300), Expect = 1e-28
Identities = 56/72 (77%), Positives = 66/72 (91%), Gaps = 1/72 (1%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
LSNTTAIAEAW +LDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DY+EV +
Sbjct: 378 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGM 437
Query: 670 ETSDMQ-PGADD 638
++ D + GA++
Sbjct: 438 DSGDGEGEGAEE 449
>BT016118-1|AAV37003.1| 450|Drosophila melanogaster LD07757p
protein.
Length = 450
Score = 124 bits (300), Expect = 1e-28
Identities = 56/72 (77%), Positives = 66/72 (91%), Gaps = 1/72 (1%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
LSNTTAIAEAW +LDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DY+EV +
Sbjct: 378 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGM 437
Query: 670 ETSDMQ-PGADD 638
++ D + GA++
Sbjct: 438 DSGDGEGEGAEE 449
>BT012506-1|AAS93777.1| 450|Drosophila melanogaster AT25469p
protein.
Length = 450
Score = 124 bits (300), Expect = 1e-28
Identities = 56/72 (77%), Positives = 66/72 (91%), Gaps = 1/72 (1%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
LSNTTAIAEAW +LDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DY+EV +
Sbjct: 378 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGM 437
Query: 670 ETSDMQ-PGADD 638
++ D + GA++
Sbjct: 438 DSGDGEGEGAEE 449
>BT003630-1|AAO39634.1| 450|Drosophila melanogaster AT26363p
protein.
Length = 450
Score = 124 bits (300), Expect = 1e-28
Identities = 56/72 (77%), Positives = 66/72 (91%), Gaps = 1/72 (1%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
LSNTTAIAEAW +LDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DY+EV +
Sbjct: 378 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGM 437
Query: 670 ETSDMQ-PGADD 638
++ D + GA++
Sbjct: 438 DSGDGEGEGAEE 449
>AY113631-1|AAM29636.1| 449|Drosophila melanogaster RH71862p
protein.
Length = 449
Score = 124 bits (300), Expect = 1e-28
Identities = 57/72 (79%), Positives = 65/72 (90%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
LSNTTAIAEAW +LDHKFDLMY+KRAFVHWYVGEGMEEGEF+EAREDLAALE+DY+EV I
Sbjct: 378 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFAEAREDLAALEKDYEEVGI 437
Query: 670 ETSDMQPGADDE 635
+ S + G D+E
Sbjct: 438 D-STTELGEDEE 448
>AY084208-1|AAL89946.1| 450|Drosophila melanogaster SD07763p
protein.
Length = 450
Score = 124 bits (300), Expect = 1e-28
Identities = 56/72 (77%), Positives = 66/72 (91%), Gaps = 1/72 (1%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
LSNTTAIAEAW +LDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DY+EV +
Sbjct: 378 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGM 437
Query: 670 ETSDMQ-PGADD 638
++ D + GA++
Sbjct: 438 DSGDGEGEGAEE 449
>AE014297-1015|AAF54433.1| 449|Drosophila melanogaster CG9476-PA
protein.
Length = 449
Score = 124 bits (300), Expect = 1e-28
Identities = 57/72 (79%), Positives = 65/72 (90%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
LSNTTAIAEAW +LDHKFDLMY+KRAFVHWYVGEGMEEGEF+EAREDLAALE+DY+EV I
Sbjct: 378 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFAEAREDLAALEKDYEEVGI 437
Query: 670 ETSDMQPGADDE 635
+ S + G D+E
Sbjct: 438 D-STTELGEDEE 448
>AE014297-627|AAN13341.1| 450|Drosophila melanogaster CG2512-PB,
isoform B protein.
Length = 450
Score = 124 bits (300), Expect = 1e-28
Identities = 56/72 (77%), Positives = 66/72 (91%), Gaps = 1/72 (1%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
LSNTTAIAEAW +LDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DY+EV +
Sbjct: 378 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGM 437
Query: 670 ETSDMQ-PGADD 638
++ D + GA++
Sbjct: 438 DSGDGEGEGAEE 449
>AE014297-626|AAF54007.1| 450|Drosophila melanogaster CG2512-PA,
isoform A protein.
Length = 450
Score = 124 bits (300), Expect = 1e-28
Identities = 56/72 (77%), Positives = 66/72 (91%), Gaps = 1/72 (1%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
LSNTTAIAEAW +LDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DY+EV +
Sbjct: 378 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGM 437
Query: 670 ETSDMQ-PGADD 638
++ D + GA++
Sbjct: 438 DSGDGEGEGAEE 449
>AE014297-554|AAF54067.1| 450|Drosophila melanogaster CG1913-PA
protein.
Length = 450
Score = 124 bits (300), Expect = 1e-28
Identities = 56/72 (77%), Positives = 66/72 (91%), Gaps = 1/72 (1%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
LSNTTAIAEAW +LDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DY+EV +
Sbjct: 378 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGM 437
Query: 670 ETSDMQ-PGADD 638
++ D + GA++
Sbjct: 438 DSGDGEGEGAEE 449
>M14646-1|AAA28988.1| 462|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-4), complete
cds. ).
Length = 462
Score = 102 bits (244), Expect = 7e-22
Identities = 45/72 (62%), Positives = 60/72 (83%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
LSNTTAI+ A+ L +KFDLM+ KRAFVHWYVGEGMEEGEF+EARE++A LERD++EV +
Sbjct: 389 LSNTTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDFEEVGL 448
Query: 670 ETSDMQPGADDE 635
+ + + G D++
Sbjct: 449 DNA--EEGGDED 458
>AE014296-1707|AAF50226.2| 462|Drosophila melanogaster CG8308-PA
protein.
Length = 462
Score = 102 bits (244), Expect = 7e-22
Identities = 45/72 (62%), Positives = 60/72 (83%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
LSNTTAI+ A+ L +KFDLM+ KRAFVHWYVGEGMEEGEF+EARE++A LERD++EV +
Sbjct: 389 LSNTTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDFEEVGL 448
Query: 670 ETSDMQPGADDE 635
+ + + G D++
Sbjct: 449 DNA--EEGGDED 458
>AY089253-1|AAL89991.1| 455|Drosophila melanogaster AT04270p
protein.
Length = 455
Score = 71.3 bits (167), Expect = 2e-12
Identities = 34/72 (47%), Positives = 46/72 (63%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
+SN T I AW +L +KFD +Y +RAFV+ YVGEG+EEG F+EA E++ L DY EV
Sbjct: 379 ISNNTNIRIAWCRLVNKFDKLYQRRAFVYHYVGEGLEEGNFNEASENICQLVHDYLEVDA 438
Query: 670 ETSDMQPGADDE 635
+ +D E
Sbjct: 439 SAPTSRRDSDPE 450
>AE014297-2432|AAF55488.1| 455|Drosophila melanogaster CG7794-PA
protein.
Length = 455
Score = 71.3 bits (167), Expect = 2e-12
Identities = 34/72 (47%), Positives = 46/72 (63%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
+SN T I AW +L +KFD +Y +RAFV+ YVGEG+EEG F+EA E++ L DY EV
Sbjct: 379 ISNNTNIRIAWCRLVNKFDKLYQRRAFVYHYVGEGLEEGNFNEASENICQLVHDYLEVDA 438
Query: 670 ETSDMQPGADDE 635
+ +D E
Sbjct: 439 SAPTSRRDSDPE 450
>AY118611-1|AAM49980.1| 457|Drosophila melanogaster LP10436p
protein.
Length = 457
Score = 66.1 bits (154), Expect = 6e-11
Identities = 28/72 (38%), Positives = 46/72 (63%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
+ N+TAI E + ++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y +
Sbjct: 368 IGNSTAIQEIFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQE 427
Query: 670 ETSDMQPGADDE 635
T+D + DDE
Sbjct: 428 ATADDEVEFDDE 439
>AE014297-4213|AAF56770.2| 522|Drosophila melanogaster CG4869-PA
protein.
Length = 522
Score = 66.1 bits (154), Expect = 6e-11
Identities = 28/72 (38%), Positives = 46/72 (63%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
+ N+TAI E + ++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y +
Sbjct: 433 IGNSTAIQEIFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQE 492
Query: 670 ETSDMQPGADDE 635
T+D + DDE
Sbjct: 493 ATADDEVEFDDE 504
>X16826-1|CAA34726.1| 435|Drosophila melanogaster 60C beta tubulin
protein.
Length = 435
Score = 64.5 bits (150), Expect = 2e-10
Identities = 26/64 (40%), Positives = 42/64 (65%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
+ NTTAI E + ++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y +
Sbjct: 355 IGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE 414
Query: 670 ETSD 659
T+D
Sbjct: 415 ATAD 418
>M22335-1|AAA28993.1| 454|Drosophila melanogaster protein (
D.melanogaster beta-3 tubulin gene, exons 2, 3 and 4. ).
Length = 454
Score = 64.5 bits (150), Expect = 2e-10
Identities = 26/64 (40%), Positives = 42/64 (65%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
+ NTTAI E + ++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y +
Sbjct: 374 IGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE 433
Query: 670 ETSD 659
T+D
Sbjct: 434 ATAD 437
>BT015991-1|AAV36876.1| 454|Drosophila melanogaster RE53159p
protein.
Length = 454
Score = 64.5 bits (150), Expect = 2e-10
Identities = 26/64 (40%), Positives = 42/64 (65%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
+ NTTAI E + ++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y +
Sbjct: 374 IGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE 433
Query: 670 ETSD 659
T+D
Sbjct: 434 ATAD 437
>AE013599-3851|AAF47193.2| 454|Drosophila melanogaster CG3401-PA
protein.
Length = 454
Score = 64.5 bits (150), Expect = 2e-10
Identities = 26/64 (40%), Positives = 42/64 (65%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
+ NTTAI E + ++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y +
Sbjct: 374 IGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE 433
Query: 670 ETSD 659
T+D
Sbjct: 434 ATAD 437
>M20420-1|AAA28991.1| 446|Drosophila melanogaster protein (
D.melanogaster beta-2 tubulin mRNA, complete cds. ).
Length = 446
Score = 63.7 bits (148), Expect = 3e-10
Identities = 26/72 (36%), Positives = 46/72 (63%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
+ N+TAI E + ++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y +
Sbjct: 368 IGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE 427
Query: 670 ETSDMQPGADDE 635
T+D + D++
Sbjct: 428 ATADEEGEFDED 439
>AY118725-1|AAM50585.1| 446|Drosophila melanogaster GH02051p
protein.
Length = 446
Score = 63.7 bits (148), Expect = 3e-10
Identities = 26/72 (36%), Positives = 46/72 (63%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
+ N+TAI E + ++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y +
Sbjct: 368 IGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE 427
Query: 670 ETSDMQPGADDE 635
T+D + D++
Sbjct: 428 ATADEEGEFDED 439
>AE014297-930|AAF54373.1| 446|Drosophila melanogaster CG9359-PA
protein.
Length = 446
Score = 63.7 bits (148), Expect = 3e-10
Identities = 26/72 (36%), Positives = 46/72 (63%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
+ N+TAI E + ++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y +
Sbjct: 368 IGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE 427
Query: 670 ETSDMQPGADDE 635
T+D + D++
Sbjct: 428 ATADEEGEFDED 439
>M20419-1|AAA28989.1| 447|Drosophila melanogaster protein (
D.melanogaster beta-1 tubulin mRNA, complete cds. ).
Length = 447
Score = 63.3 bits (147), Expect = 4e-10
Identities = 26/72 (36%), Positives = 45/72 (62%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
+ N+TAI E + ++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y +
Sbjct: 368 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE 427
Query: 670 ETSDMQPGADDE 635
T+D ++E
Sbjct: 428 ATADEDAEFEEE 439
>BT003242-1|AAO24999.1| 447|Drosophila melanogaster LD43681p
protein.
Length = 447
Score = 63.3 bits (147), Expect = 4e-10
Identities = 26/72 (36%), Positives = 45/72 (62%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
+ N+TAI E + ++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y +
Sbjct: 368 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE 427
Query: 670 ETSDMQPGADDE 635
T+D ++E
Sbjct: 428 ATADEDAEFEEE 439
>AE013599-2894|AAN16132.2| 375|Drosophila melanogaster CG9277-PD,
isoform D protein.
Length = 375
Score = 63.3 bits (147), Expect = 4e-10
Identities = 26/72 (36%), Positives = 45/72 (62%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
+ N+TAI E + ++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y +
Sbjct: 296 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE 355
Query: 670 ETSDMQPGADDE 635
T+D ++E
Sbjct: 356 ATADEDAEFEEE 367
>AE013599-2893|AAN16133.1| 375|Drosophila melanogaster CG9277-PC,
isoform C protein.
Length = 375
Score = 63.3 bits (147), Expect = 4e-10
Identities = 26/72 (36%), Positives = 45/72 (62%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
+ N+TAI E + ++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y +
Sbjct: 296 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE 355
Query: 670 ETSDMQPGADDE 635
T+D ++E
Sbjct: 356 ATADEDAEFEEE 367
>AE013599-2892|AAF57556.1| 456|Drosophila melanogaster CG9277-PA,
isoform A protein.
Length = 456
Score = 63.3 bits (147), Expect = 4e-10
Identities = 26/72 (36%), Positives = 45/72 (62%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
+ N+TAI E + ++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y +
Sbjct: 377 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE 436
Query: 670 ETSDMQPGADDE 635
T+D ++E
Sbjct: 437 ATADEDAEFEEE 448
>AE013599-2891|AAF57555.1| 447|Drosophila melanogaster CG9277-PB,
isoform B protein.
Length = 447
Score = 63.3 bits (147), Expect = 4e-10
Identities = 26/72 (36%), Positives = 45/72 (62%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAI 671
+ N+TAI E + ++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y +
Sbjct: 368 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQE 427
Query: 670 ETSDMQPGADDE 635
T+D ++E
Sbjct: 428 ATADEDAEFEEE 439
>AY089468-1|AAL90206.1| 462|Drosophila melanogaster AT27896p
protein.
Length = 462
Score = 52.8 bits (121), Expect = 6e-07
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDY 686
+ NTTAI + +L M ++A +HWY GEGMEE EF +A+++L A+ DY
Sbjct: 367 IGNTTAIQTLFQRLLDASMSMLRRKAHLHWYTGEGMEEQEFQDAQQELQAIIDDY 421
>AE014296-1121|AAF50659.1| 462|Drosophila melanogaster CG32396-PA
protein.
Length = 462
Score = 52.8 bits (121), Expect = 6e-07
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = -3
Query: 850 LSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDY 686
+ NTTAI + +L M ++A +HWY GEGMEE EF +A+++L A+ DY
Sbjct: 367 IGNTTAIQTLFQRLLDASMSMLRRKAHLHWYTGEGMEEQEFQDAQQELQAIIDDY 421
>AY060858-1|AAL28406.1| 607|Drosophila melanogaster GM03282p
protein.
Length = 607
Score = 29.5 bits (63), Expect = 6.1
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 562 QTL*QETNIQ*QKCKSSSATKTIITHHRRRAACLTSQ*PLHRNLVPELPNLLSLQR 729
Q+ Q+ Q Q+ TI H + LTS+ P+ + ELPNL QR
Sbjct: 102 QSAAQKQQQQQQQSHQLQTVATIHQPHSTQQQALTSRLPIQQQSAKELPNLAGQQR 157
>AE014134-533|AAF51166.1| 607|Drosophila melanogaster CG17265-PA
protein.
Length = 607
Score = 29.5 bits (63), Expect = 6.1
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 562 QTL*QETNIQ*QKCKSSSATKTIITHHRRRAACLTSQ*PLHRNLVPELPNLLSLQR 729
Q+ Q+ Q Q+ TI H + LTS+ P+ + ELPNL QR
Sbjct: 104 QSAAQKQQQQQQQSHQLQTVATIHQPHSTQQQALTSRLPIQQQSTKELPNLAGQQR 159
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,492,722
Number of Sequences: 53049
Number of extensions: 750622
Number of successful extensions: 1912
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1912
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4085918148
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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