Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11a06
(860 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 45 2e-05
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 44 3e-05
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 43 6e-05
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 39 8e-04
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 39 0.001
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 38 0.001
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 35 0.013
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 35 0.013
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 34 0.030
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 34 0.030
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 33 0.052
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 33 0.069
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 32 0.091
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 31 0.28
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 31 0.28
SPCC569.01c |||DUF1773 family protein 5|Schizosaccharomyces pomb... 30 0.37
SPCP20C8.01c |||B13958 domain|Schizosaccharomyces pombe|chr 3|||... 30 0.37
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 30 0.37
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 30 0.37
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 30 0.49
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 30 0.49
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 30 0.49
SPAC27F1.04c |nuf2||spindle pole body protein Nuf2|Schizosacchar... 29 0.64
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 29 0.64
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 29 1.1
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 29 1.1
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 28 2.0
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 28 2.0
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 28 2.0
SPAC31A2.10 |||RanGTP-binding protein |Schizosaccharomyces pombe... 27 2.6
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 27 2.6
SPBC839.08c |its8||pig-N |Schizosaccharomyces pombe|chr 2|||Manual 27 2.6
SPCC553.09c |spb70|pol12|DNA polymerase alpha B-subunit|Schizosa... 27 3.4
SPBC1921.03c |mex67||mRNA export receptor Mex67|Schizosaccharomy... 27 3.4
SPAC664.03 |||RNA polymerase II associated Paf1 complex |Schizos... 26 6.0
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 6.0
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 26 6.0
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 26 6.0
SPCC1620.10 |cwf26||complexed with Cdc5 protein Cwf26 |Schizosac... 26 6.0
SPAC17G6.07c |||SNARE Slt1 |Schizosaccharomyces pombe|chr 1|||Ma... 26 6.0
SPAC1071.02 |||TFIIH regulator |Schizosaccharomyces pombe|chr 1|... 26 7.9
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 26 7.9
SPAC6B12.05c |||chromatin remodeling complex subunit |Schizosacc... 26 7.9
SPBC19G7.10c |||topoisomerase associated protein |Schizosaccharo... 26 7.9
SPAC24C9.05c |mug70||conserved protein |Schizosaccharomyces pomb... 26 7.9
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 44.8 bits (101), Expect = 2e-05
Identities = 55/233 (23%), Positives = 106/233 (45%), Gaps = 18/233 (7%)
Frame = -1
Query: 806 EQINLEIQRVKLKFQEKLQELAPIPDLLKATQMRLKDAQQAQAIAEHNAEQLA--RELNC 633
EQ N + R+ + EK + L L + ++ + + + + NAE A +E+
Sbjct: 1404 EQANTKNTRLAAAWNEKCENLKK-SSLTRFAHLKQELTNKNKELTSKNAENEAMQKEIES 1462
Query: 632 AREKVHVLLHNSLKPPEK---------PPERGGDEKQMALLNQRISQLAENNISL--KSE 486
++ H L ++ E+ E+ EK++A + L + K+E
Sbjct: 1463 LKDSNHQLQESASSDAEQITKEQFEQLKSEKERTEKELADSKNELEHLQSEAVDADGKTE 1522
Query: 485 IERLKASV--IRTEESALANEKRLQEKMHECAQLGGELDRTRDEASRA--LQRAHEQTET 318
I L+ + +R+++ L + +Q E A L E T+ A + R Q E+
Sbjct: 1523 ISNLEKEIHELRSDKEGLVQQ--VQNLSAELAALR-EHSPTQGSLENADEIARLRSQLES 1579
Query: 317 VRKCLQTTVAELERQLAASRAQ-VSTAEKEREELKNRLHWQMKRLTENFEQAQ 162
++ + E E ++ A+R++ V+ EK +EEL+N+L+ + +R+ E EQAQ
Sbjct: 1580 TKQYYEK---EKETEILAARSELVAEKEKTKEELENQLNEKSQRIKELEEQAQ 1629
Score = 36.3 bits (80), Expect = 0.006
Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 16/205 (7%)
Frame = -1
Query: 773 LKFQEKLQELAPIPDLLKATQMRLKDAQQAQAIAEHNAEQLARELNCAREKVHVLLHN-- 600
L+ Q QE A L + L+ Q +I E+N L+REL +K+ + LH
Sbjct: 172 LELQHTQQEKA---SLQTNYEFELQKLTQKNSILENNNTWLSRELQGVNDKL-LSLHQEA 227
Query: 599 SLKPPEKPPERGGDEKQMALLNQRIS----QLAENNISLKSEIERLKASVIRTEESALAN 432
SL+ + + + L +++S Q E+N+ ++ + L + E S ++
Sbjct: 228 SLEKSQLSSQLSDAVLEKDALQRKVSSLSQQFTESNLRYQNIVAELSEMRKQYEFSQVSF 287
Query: 431 EKRL----------QEKMHECAQLGGELDRTRDEASRALQRAHEQTETVRKCLQTTVAEL 282
EK + EK +C+ EL + E + L+ A E + + A L
Sbjct: 288 EKEISSQKQISELWMEKCEDCSLRLKELQNSNGELEKLLEAAQSSFEEQLESHKEAEASL 347
Query: 281 ERQLAASRAQVSTAEKEREELKNRL 207
+ Q+ +VS+ E + + RL
Sbjct: 348 KSQINFLEKEVSSLESQLKLANERL 372
Score = 31.5 bits (68), Expect = 0.16
Identities = 38/203 (18%), Positives = 80/203 (39%)
Frame = -1
Query: 749 ELAPIPDLLKATQMRLKDAQQAQAIAEHNAEQLARELNCAREKVHVLLHNSLKPPEKPPE 570
EL + L+ ++ + QQ +E E + N E+ L+ + + E+ +
Sbjct: 951 ELERTKEKLRMAELEKSNIQQKYLASEKTLEMM----NETHEQFKHLVESEISTREE--K 1004
Query: 569 RGGDEKQMALLNQRISQLAENNISLKSEIERLKASVIRTEESALANEKRLQEKMHECAQL 390
++ LN+R+ L E S E+ + +R ++SAL+ +K
Sbjct: 1005 ITSLRSELLDLNKRVEVLKEEKESSSKELAKQLEDAVREKDSALSFKK------------ 1052
Query: 389 GGELDRTRDEASRALQRAHEQTETVRKCLQTTVAELERQLAASRAQVSTAEKEREELKNR 210
+ ++ R +A R + E E R ++ + E ++ + R E +
Sbjct: 1053 --DYEKIRSDADRVITSLKEDIEKERSLMKECHSNYESEIVSHGRTTQKLRDLRTEF-DE 1109
Query: 209 LHWQMKRLTENFEQAQLRILGLQ 141
++ + +L NFEQ + G +
Sbjct: 1110 VNTKYLKLKANFEQQHSGLSGAE 1132
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 44.0 bits (99), Expect = 3e-05
Identities = 51/237 (21%), Positives = 100/237 (42%)
Frame = -1
Query: 800 INLEIQRVKLKFQEKLQELAPIPDLLKATQMRLKDAQQAQAIAEHNAEQLARELNCAREK 621
I L+ + + + QE+L A I D T+ + ++ Q+ A + +L EL K
Sbjct: 874 IALDKEEILRRTQERL---ANIEDSFSETKQQNENLQRESASLKQINNELESELLEKTSK 930
Query: 620 VHVLLHNSLKPPEKPPERGGDEKQMALLNQRISQLAENNISLKSEIERLKASVIRTEESA 441
V LL + EK +EK + + L ENN ++ SE +E+
Sbjct: 931 VETLLSEQNELKEK---LSLEEKDLLDTKGELESLRENNATVLSEKAEFNEQCKSLQETI 987
Query: 440 LANEKRLQEKMHECAQLGGELDRTRDEASRALQRAHEQTETVRKCLQTTVAELERQLAAS 261
+ + L + + E+ R + +++ +Q ++ + L+ V +LER+ +
Sbjct: 988 VTKDAELDKLTKYISDYKTEIQEMRLTNQKMNEKSIQQEGSLSESLK-RVKKLERENSTL 1046
Query: 260 RAQVSTAEKEREELKNRLHWQMKRLTENFEQAQLRILGLQTQVQSLRRTASSTGDGD 90
+ VS ++++EEL + L + N E+ + Q+ L++ S D D
Sbjct: 1047 ISDVSILKQQKEEL-SVLKGVQELTINNLEEKVNYLEADVKQLPKLKKELESLNDKD 1102
Score = 30.7 bits (66), Expect = 0.28
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 6/111 (5%)
Frame = -1
Query: 494 KSEIERLKASVIRTEESALANEKRLQEKMHECAQLGGELDRTRDEASR---ALQRAHEQT 324
KSE+ER ++ T S A E L + L RT++ + + +Q
Sbjct: 847 KSEVER---DLVETNNSLTAVENLLTTERAIALDKEEILRRTQERLANIEDSFSETKQQN 903
Query: 323 ETVRK---CLQTTVAELERQLAASRAQVSTAEKEREELKNRLHWQMKRLTE 180
E +++ L+ ELE +L ++V T E+ ELK +L + K L +
Sbjct: 904 ENLQRESASLKQINNELESELLEKTSKVETLLSEQNELKEKLSLEEKDLLD 954
Score = 30.7 bits (66), Expect = 0.28
Identities = 31/151 (20%), Positives = 72/151 (47%), Gaps = 8/151 (5%)
Frame = -1
Query: 554 KQMALLNQRISQLAENNISLKSEIERLKASV--IRTEESALAN-EKRLQEKMHECAQLGG 384
+Q A +++S + N L +++ L V + + S + E+++ MHE +QLG
Sbjct: 1210 RQSASYKEKLSLASSENKDLSNKVSSLTKQVNELSPKASKVPELERKITNLMHEYSQLGK 1269
Query: 383 ELDRTRDEASRAL--QRAHEQTETVRKCLQTTVAELERQLAASRAQVSTAEKEREE---L 219
+ DE +AL R +E+ +++ L++ +LE + +V T R E L
Sbjct: 1270 TFE---DEKRKALIASRDNEELRSLKSELESK-RKLEVEYQKVLEEVKTTRSLRSEVTLL 1325
Query: 218 KNRLHWQMKRLTENFEQAQLRILGLQTQVQS 126
+N++ + + + +++++ + ++ S
Sbjct: 1326 RNKVA-DHESIRSKLSEVEMKLVDTRKELNS 1355
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 42.7 bits (96), Expect = 6e-05
Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 11/206 (5%)
Frame = -1
Query: 659 EQLARELNCAREKVHVLLHNSLKPPEKPPERGGDEKQMALLNQRISQLAENNISLKSEIE 480
+ L + N + + L S + E + D+ Q+ LN+RIS A+ S++S I
Sbjct: 792 DNLGNKENIISDLKNKLSEESTRLQELQSQLNQDKNQIETLNERISAAADELSSMES-IN 850
Query: 479 RLKASVIRTEESALANEKRLQEKMHECAQLGGELDRTRDEASRALQRAHEQTETVRKCLQ 300
+ +A+ ++ + +N LQEK++ +L E + L+ A + T+ K L+
Sbjct: 851 KNQANELKLAKQKCSN---LQEKINFGNKLAKEHTEKISSLEKDLEAATKTASTLSKELK 907
Query: 299 TTVAELERQLAAS----RAQVSTAEKEREELKNRLHWQMKRLT---ENFEQAQLRILGLQ 141
T +E + + S + S ++ +E+ L ++L E E+ ++ I+GLQ
Sbjct: 908 TVKSENDSLKSVSNDDQNKEKSVNNEKFKEVSQALAEANEKLNARDEEIERLKVDIIGLQ 967
Query: 140 T---QVQSLRRTASST-GDGDGENQE 75
+QSL+ + + T D + +N+E
Sbjct: 968 NASLNMQSLKDSDNRTISDLESKNKE 993
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 39.1 bits (87), Expect = 8e-04
Identities = 39/174 (22%), Positives = 72/174 (41%), Gaps = 14/174 (8%)
Frame = -1
Query: 560 DEKQMALLNQRISQLAENNISLKSEIERLKASVIRT-------EESALANEKRLQEKMHE 402
++K ++I+ L E LK EIERL+A R E+ A E+ +E +E
Sbjct: 137 EQKIQEEFERQITDLLEEQQQLKLEIERLEAETERANSETEQYEKQKEALEEEYEELRNE 196
Query: 401 C----AQLGGE---LDRTRDEASRALQRAHEQTETVRKCLQTTVAELERQLAASRAQVST 243
C QL E L T +E R L + + K L+ ++ + +
Sbjct: 197 CLKHDPQLDAEIRTLQDTFEEVERTLTKQVSDAKIADKPLKDSMFNSNSEKEKIMHALEK 256
Query: 242 AEKEREELKNRLHWQMKRLTENFEQAQLRILGLQTQVQSLRRTASSTGDGDGEN 81
AEK+ + + M++L + E++ I Q ++ + + + D D ++
Sbjct: 257 AEKDADIYSEFIQQYMEQLESSLEKSSTAIENAQNRLAEMTAHLAESSDYDNDD 310
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 38.7 bits (86), Expect = 0.001
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Frame = -1
Query: 488 EIERLKASVIRTEESALANEKRLQEKMHECAQLGGEL-DRTR--DEASRALQRAHEQTET 318
EIE+ + ++ EES ++ +++ E QL D+ DE + LQ E+
Sbjct: 579 EIEKFEKTIRENEESISLFKEEVEKLTDEITQLSERYNDKCHEFDELQKRLQTLEEENNK 638
Query: 317 VRKCLQTTVAELERQLAASRAQVSTAEKEREELKNRLHWQMKRLTENFEQAQLRILGLQT 138
++ + + L QL + A+V + KE EE K + + L ++ + L L
Sbjct: 639 AKEDSTSKTSNLLEQLKMTEAEVDSLRKENEENKQVIALKESELVKSNDNKLL----LNE 694
Query: 137 QVQSL 123
Q++SL
Sbjct: 695 QIESL 699
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 38.3 bits (85), Expect = 0.001
Identities = 35/144 (24%), Positives = 57/144 (39%), Gaps = 10/144 (6%)
Frame = -1
Query: 524 SQLAENNISLKSEIERLKASVIRTEESALANEKRLQEKMHECAQL---GGELDRTRDEAS 354
SQL + SLK + +A R SA + +++E +++ L E DR E
Sbjct: 449 SQLKDEITSLKQTVSESEAERKRLFSSAQEKQLQMKETVNKLTSLQEQNNEFDRQLKEQE 508
Query: 353 RALQRAHEQTETVRKCLQTTVAE------LERQLAASRAQVSTA-EKEREELKNRLHWQM 195
LQ E+ +RK L+ + L QL R + A E L + Q+
Sbjct: 509 EDLQNKEEELTELRKLLREQTQDSQKLRLLVEQLELERQDLKQAGENHYSNLSSDYETQI 568
Query: 194 KRLTENFEQAQLRILGLQTQVQSL 123
K L + +Q + Q ++ L
Sbjct: 569 KSLESSLTNSQAECVSFQEKINEL 592
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 35.1 bits (77), Expect = 0.013
Identities = 47/236 (19%), Positives = 97/236 (41%), Gaps = 3/236 (1%)
Frame = -1
Query: 818 TRISEQINLEIQRVKLKFQEKLQELAPIPDLLKATQMRLKDAQQAQAIAEHNAEQLAREL 639
T + + L Q++ F+ KL E+ L+ + ++ + +A NAE+ A
Sbjct: 591 TLVEKYSELSKQQIVEWFKSKLYEI------LRDSASKIDSLTEKLKVA--NAEKNAALC 642
Query: 638 NCAREKVHVLLHNSLKPPEKPPERGGDEKQMALLNQRISQLAENNISLKSEIERLKASVI 459
A EKV + HN L D++ + N + + + N SL +E ++ +
Sbjct: 643 EAALEKVPLAKHNKLSDGTFSTP---DKENVQSTND--AHIMQENFSLHKALEVMRETSS 697
Query: 458 RTEESALANEKRLQEKMHECAQLGGELDRTRDEASRALQRAHEQTETVRKCLQTTVAELE 279
++ +E + + + EL R E A+ + ++ E++ + + V LE
Sbjct: 698 DLDKQLKDATASQKELIVQTSSFQKELVEER-ERHNAISKRLQEIESLYRDRELLVTNLE 756
Query: 278 RQLAASRAQVSTAEKEREELKNR---LHWQMKRLTENFEQAQLRILGLQTQVQSLR 120
QL ++ ER++ + R +K LT E + + L ++S++
Sbjct: 757 DQLVDQTVTINKFAFERDQFRERSMGFENTIKDLTRKMEATDMLNVSLHESLRSVQ 812
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 35.1 bits (77), Expect = 0.013
Identities = 41/166 (24%), Positives = 71/166 (42%), Gaps = 4/166 (2%)
Frame = -1
Query: 806 EQINLEIQRVKLKFQEKLQELAPIPDLLKATQ-MRLKDAQQAQAIAEHNAEQLARE--LN 636
E+ + +KL Q+++QE A KA + RL+ + A+ AE A++ A E
Sbjct: 520 EEASQRKDAIKLAIQQRIQEKAEAEAKRKAEEKARLEAEENAKREAEEQAKREAEEKAKR 579
Query: 635 CAREKVHVLLHNSLK-PPEKPPERGGDEKQMALLNQRISQLAENNISLKSEIERLKASVI 459
A EK K E+ +R +EK ++ + AE K E E KA
Sbjct: 580 EAEEKAKREAEEKAKREAEENAKREAEEKAKREAEEKAKREAEE--KAKREAEE-KAKRE 636
Query: 458 RTEESALANEKRLQEKMHECAQLGGELDRTRDEASRALQRAHEQTE 321
E++ E++ + + E A+ E + R+ +A + A E +
Sbjct: 637 AEEKAKREAEEKAKREAEEKAKREAEENAKREAEEKAKREAEENAK 682
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 33.9 bits (74), Expect = 0.030
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Frame = -1
Query: 467 SVIRTEESALAN-EKRLQEKMHECAQLGGELDRTRDEASRALQRAHEQTETVRKCLQTTV 291
S T+ LA+ E +L+ ++ + E +R + E R L HEQ + LQ +
Sbjct: 48 SANETKNPKLASLEFQLENLKNDLKRKELEFEREQIELQRKLAEEHEQ----KNSLQLRL 103
Query: 290 AELERQLAASRAQVSTAEKEREELKNRLHWQMKRLTENFEQAQLRILGLQTQVQ 129
+E+QL Q ++ +KE EE++N ++ E + I L+TQ++
Sbjct: 104 TLVEKQL---EEQSTSYQKEIEEVRNEKEATQVKIHELLDAKWKEIAELKTQIE 154
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 33.9 bits (74), Expect = 0.030
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 6/172 (3%)
Frame = -1
Query: 707 RLKDAQQAQA-----IAEHNAEQLARELNCAREKVHVLLHNSLKPPEKPPERGGDEKQMA 543
R K AQQ QA I E N + REL REK + +K + +E++
Sbjct: 561 REKVAQQRQAKLLEEIEEENKRKQERELKKIREK------EKKRDKKKQLKLAKEEERQ- 613
Query: 542 LLNQRISQLAENNISLKSEIERLKASVIRTEESALANEKRLQEKMHECAQLGGELDRTRD 363
+ +LAE E +R + + + EE L E+ ++K E + E + +
Sbjct: 614 --RREAERLAEQAAQKALEAKRQEEARKKREEQRLKREQ--EKKQQELERQKREEKQKQK 669
Query: 362 EASRALQRAHEQTETVRKCLQTTV-AELERQLAASRAQVSTAEKEREELKNR 210
E + L++ ++ + + + + E E+++ R + +KE EE + R
Sbjct: 670 EREKKLKKQQQEADREKMAREQRLREEEEKRILEERKRREKLDKEEEERRRR 721
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 33.1 bits (72), Expect = 0.052
Identities = 25/107 (23%), Positives = 46/107 (42%)
Frame = -1
Query: 533 QRISQLAENNISLKSEIERLKASVIRTEESALANEKRLQEKMHECAQLGGELDRTRDEAS 354
Q+I+ + K EI+R+ A + + A R+Q K H L + D+ +
Sbjct: 497 QKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNH-LESYAYSLRNSLDDPN 555
Query: 353 RALQRAHEQTETVRKCLQTTVAELERQLAASRAQVSTAEKEREELKN 213
+ ETV K ++ T+ L+ A++ + +KE E + N
Sbjct: 556 LKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESVAN 602
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 32.7 bits (71), Expect = 0.069
Identities = 57/236 (24%), Positives = 109/236 (46%), Gaps = 1/236 (0%)
Frame = -1
Query: 821 NTRISEQINLEIQRVKLKFQ-EKLQELAPIPDLLKATQMRLKDAQQAQAIAEHNAEQLAR 645
+TRISE NL+ +R L + EKL++L L+ T LKD++ + + E +L +
Sbjct: 325 STRISEFDNLKSERDTLSIKNEKLEKL------LRNTIGSLKDSRTSNSQLEEEMVEL-K 377
Query: 644 ELNCAREKVHVLLHNSLKPPEKPPERGGDEKQMALLNQRISQLAENNISLKSEIERLKAS 465
E N +H+ L E + E++ L I + +NN+S K ++ + +S
Sbjct: 378 ESNRT-------IHSQLTDAES--KLSSFEQENKSLKGSIDEY-QNNLSSKDKMVKQVSS 427
Query: 464 VIRTEESALANEKRLQEKMHECAQLGGELDRTRDEASRALQRAHEQTETVRKCLQTTVAE 285
+ S+LA H +L E++ RD ++ ++ + + +R CL ++ E
Sbjct: 428 QLEEARSSLA---------HATGKLA-EINSERDFQNKKIKDFEKIEQDLRACLNSSSNE 477
Query: 284 LERQLAASRAQVSTAEKEREELKNRLHWQMKRLTENFEQAQLRILGLQTQVQSLRR 117
L+ + A + RE++K + K+++E+ Q+ +QSL+R
Sbjct: 478 LKEKSALIDKKDQELNNLREQIK-----EQKKVSES----------TQSSLQSLQR 518
Score = 32.7 bits (71), Expect = 0.069
Identities = 49/254 (19%), Positives = 104/254 (40%), Gaps = 17/254 (6%)
Frame = -1
Query: 806 EQINLEIQRVKLKFQEKLQELAPIPDLLKATQMRLKDAQQAQAIAEHNAEQLARELNCAR 627
+ +N EI+ + +EK + + + L + + A+ EH + +R+ +
Sbjct: 1400 DHLNQEIRLKEDVLKEKESLIISLEESLSNQRQKESSLLDAKNELEHMLDDTSRKNSSLM 1459
Query: 626 EKVHVLLHNSLKPPEKPPERGGDEKQMALLNQRISQLAENNISLKSEIERLKASVIRTEE 447
EK+ + ++SL +K E +++ L + L ++SL +E +K+ + +E
Sbjct: 1460 EKIESI-NSSLD--DKSFELASAVEKLGALQK----LHSESLSL---MENIKSQLQEAKE 1509
Query: 446 SALANEKRLQEKMHECAQLGGELD---RTRDEASRALQRAHEQTETV----RKCLQTTVA 288
+E +QE HE + +D R L EQ + + ++
Sbjct: 1510 KIQVDESTIQELDHEITASKNNYEGKLNDKDSIIRDLSENIEQLNNLLAEEKSAVKRLST 1569
Query: 287 ELERQLAASRAQVSTAEKEREELKNRLHWQMKRLTENFEQAQL----------RILGLQT 138
E E ++ ++++ E + ++++ L +L E+ QL R+L LQ
Sbjct: 1570 EKESEILQFNSRLADLEYHKSQVESELGRSKLKLASTTEELQLAENERLSLTTRMLDLQN 1629
Query: 137 QVQSLRRTASSTGD 96
QV+ L S +
Sbjct: 1630 QVKDLSNIKDSLSE 1643
Score = 27.5 bits (58), Expect = 2.6
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 10/116 (8%)
Frame = -1
Query: 713 QMRLKDAQQAQAIAEHNAEQLARELNCAREKVHVLLHNSLKPPEKPPERGGDEKQMALLN 534
Q +L + + + + A L+R+L EK L EK E+ ++ ++ +
Sbjct: 186 QKKLTNMESNFSAKQSEAYDLSRQLLTVTEK--------LDKKEKDYEK--IKEDVSSIK 235
Query: 533 QRISQLAENNISLKSEIERLKASVI----------RTEESALANEKRLQEKMHECA 396
+++ +N SL+ E ERL+ ++ +TE S A K LQEK+ +CA
Sbjct: 236 ASLAEEQASNKSLRGEQERLEKLLVSSNKTVSTLRQTENSLRAECKTLQEKLEKCA 291
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 32.3 bits (70), Expect = 0.091
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 266 PPAVVPALLPWFGGTSAQFPFAR-GLSAAPARPRPWCGPTLPQA 394
PP A TS+ P+A+ SAAP+ P PW P PQ+
Sbjct: 406 PPPWAAASTSVSSSTSSPAPWAKPASSAAPSNPAPWQQPAAPQS 449
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 30.7 bits (66), Expect = 0.28
Identities = 27/140 (19%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Frame = -1
Query: 551 QMALLNQRISQLAENNISLKSEIERLKASVIRTEESALANEKRLQEKMHECAQLGGELDR 372
++ LNQR ++++E S + EI +L+ V + E+R+ + + + +R
Sbjct: 831 ELESLNQRFTEISERIPSAELEISKLQLDVSACDRLVAGEERRILQLKSDLKSIRNNNER 890
Query: 371 TR---------DEASRALQRAHEQTETVRKCLQTTVAELER-QLAASRAQVSTAEKEREE 222
R D+ A+ +E T K LQ + E+ + +++V ++ +
Sbjct: 891 KRNLQNKISNMDKEVEAININNEGLVTEIKTLQDKIMEIGGIRYRIQKSKVDDLHEQLKF 950
Query: 221 LKNRLHWQMKRLTENFEQAQ 162
+K++L+ + +N +++Q
Sbjct: 951 VKDKLNKMSFKKKKNEQRSQ 970
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 30.7 bits (66), Expect = 0.28
Identities = 26/128 (20%), Positives = 60/128 (46%), Gaps = 1/128 (0%)
Frame = -1
Query: 533 QRISQLAENNISLKSEIERLKASVIRTEESALANEKRLQEKMHECAQLGGELDRTRDEAS 354
QR+SQL ++ +E++ LK + ++E L +L K+ + + EL+ + + S
Sbjct: 457 QRLSQLLISSQPALTEVKHLKLCLSDSQEELL----QLNAKLEKANIVIDELNSAKLKLS 512
Query: 353 RALQRAHEQTETVRKCLQTTVAELERQLAASRAQV-STAEKEREELKNRLHWQMKRLTEN 177
+ ++ + + + Q ++E +++ S KE E LK + + L E
Sbjct: 513 KQVEEESSMKDDLTEMNQRLKEQIESYENEVNSEITSRTLKEFETLKTQYEKNLCNLREQ 572
Query: 176 FEQAQLRI 153
+ A++++
Sbjct: 573 LKTARMKL 580
>SPCC569.01c |||DUF1773 family protein 5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 323
Score = 30.3 bits (65), Expect = 0.37
Identities = 16/86 (18%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Frame = -1
Query: 557 EKQMALLNQRISQLAENNISLKSEIERLKASVIRTEESALANEKRLQEKMHECAQLGGEL 378
+ +M + ++++ + +K E RL + E+ A + ++++ + Q +
Sbjct: 141 QNEMTSMKGEMAEMKVEMVEMKRETIRLNTRIDLLEQKTEARFQSIEQRFNSIDQRFNSI 200
Query: 377 DRTRDEASRALQRAHEQTETV--RKC 306
DR D + L ++ ET+ R C
Sbjct: 201 DRRFDSMEQRLDSMDQKMETIDARSC 226
>SPCP20C8.01c |||B13958 domain|Schizosaccharomyces pombe|chr
3|||Manual
Length = 247
Score = 30.3 bits (65), Expect = 0.37
Identities = 16/86 (18%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Frame = -1
Query: 557 EKQMALLNQRISQLAENNISLKSEIERLKASVIRTEESALANEKRLQEKMHECAQLGGEL 378
+ +M + ++++ + +K E RL + E+ A + ++++ + Q +
Sbjct: 141 QNEMTSMKGEMAEMKVEMVEMKRETIRLNTRIDLLEQKTEARFQSIEQRFNSIDQRFNSI 200
Query: 377 DRTRDEASRALQRAHEQTETV--RKC 306
DR D + L ++ ET+ R C
Sbjct: 201 DRRFDSMEQRLDSMDQKMETIDARSC 226
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 30.3 bits (65), Expect = 0.37
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = -1
Query: 452 EESALANEKRLQEKMHECAQLGGEL-DRTRDEASRAL---QRAHEQTETVRKCLQTTVAE 285
E L EK+L E++ + +L DR E+ +A Q+A EQ E +RK L+ +A+
Sbjct: 371 ESQLLKREKQLSEELAKLRSTNAQLTDRITQESKKASFLEQKASEQEEVIRK-LEKDLAD 429
Query: 284 LE 279
++
Sbjct: 430 VD 431
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 30.3 bits (65), Expect = 0.37
Identities = 24/111 (21%), Positives = 54/111 (48%)
Frame = -1
Query: 482 ERLKASVIRTEESALANEKRLQEKMHECAQLGGELDRTRDEASRALQRAHEQTETVRKCL 303
E L+ +++ + S R +EK+ + ++ + ++E R +E TV+K L
Sbjct: 300 ESLRRALVLIQGSCTEKILRFKEKILDLLEM-----KQQEENDRISHIEYENDLTVKK-L 353
Query: 302 QTTVAELERQLAASRAQVSTAEKEREELKNRLHWQMKRLTENFEQAQLRIL 150
+ ++ELE + ++ S +EKE EE + L +++ + + ++L
Sbjct: 354 KRRISELEMAVKEYESEKSYSEKEYEEKISSLRIELEDKLAEIDMLRNKLL 404
>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
Brl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 692
Score = 29.9 bits (64), Expect = 0.49
Identities = 26/137 (18%), Positives = 60/137 (43%)
Frame = -1
Query: 560 DEKQMALLNQRISQLAENNISLKSEIERLKASVIRTEESALANEKRLQEKMHECAQLGGE 381
DEK+ + + +L +NN L++E+ + A+ +++ L + L+ K + ++ E
Sbjct: 425 DEKEEISASSALEKLIKNNSCLEAELPSMYAAFDQSQSRLLKKYEELETKEKKALEMHYE 484
Query: 380 LDRTRDEASRALQRAHEQTETVRKCLQTTVAELERQLAASRAQVSTAEKEREELKNRLHW 201
R + A+ +A + T +K L+ + + + + K LK L
Sbjct: 485 KARATQKYFAAM-KARDILMTEKKTLKLAENKEHDYIGKLQEREHALTKYESSLKAELE- 542
Query: 200 QMKRLTENFEQAQLRIL 150
K++ E + + + +L
Sbjct: 543 VYKQIKEIYGKHSVEVL 559
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 29.9 bits (64), Expect = 0.49
Identities = 40/169 (23%), Positives = 72/169 (42%), Gaps = 13/169 (7%)
Frame = -1
Query: 584 EKPPERGGDEKQM-ALLNQRISQLAENNISLKSEIERLKASVIRTEE--SAL-ANEKRLQ 417
++ PE EK++ A NQ+ L +LKS E L + EE SA+ E+R +
Sbjct: 247 DESPEESEPEKELKATFNQQNQDLYNQTEALKSTNEELINQIKSAEELDSAIQVLEERYR 306
Query: 416 EKMHECAQLGGELD------RTRDEASRALQRAHEQTETVRKCLQTTVAELERQLAASRA 255
+ + + +R + LQ E+ E+ + L+ L+ Q+
Sbjct: 307 TMQRDEVKFQSAMSGMKSKMESRTNLMKQLQVNIEEKESQLQLLKEKRDSLKYQVENQDI 366
Query: 254 QVSTAEK---EREELKNRLHWQMKRLTENFEQAQLRILGLQTQVQSLRR 117
+S EK ERE+L L+ +++E ++ L +Q + SL +
Sbjct: 367 SISEFEKMVSEREQLDRNLNMIGSKISELRKEVFDTDLLIQASIDSLEK 415
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 29.9 bits (64), Expect = 0.49
Identities = 35/178 (19%), Positives = 77/178 (43%), Gaps = 1/178 (0%)
Frame = -1
Query: 797 NLEI-QRVKLKFQEKLQELAPIPDLLKATQMRLKDAQQAQAIAEHNAEQLARELNCAREK 621
NLE + V + +EK++ L + + +L+ Q + A E E ++
Sbjct: 1245 NLERNEEVITELREKIETLKTDLANFRLNKEQLESQLQTEKAAVKKLENSNEEYKRHNQE 1304
Query: 620 VHVLLHNSLKPPEKPPERGGDEKQMALLNQRISQLAENNISLKSEIERLKASVIRTEESA 441
+ + L++S + ++ I +L + LKSE+E +K+ E
Sbjct: 1305 ILLSLNSSTSTSSDASRL---KNELVSKENLIEELNQEIGHLKSELETVKSKSEDLENER 1361
Query: 440 LANEKRLQEKMHECAQLGGELDRTRDEASRALQRAHEQTETVRKCLQTTVAELERQLA 267
N+ ++++ + +L RT+ E + + ++ E+ +R+ L +ELE ++A
Sbjct: 1362 AQNQSKIEQLELKNTKLAAAW-RTKYE--QVVNKSLEKHNQIRQQLSQKTSELEAKVA 1416
>SPAC27F1.04c |nuf2||spindle pole body protein
Nuf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 29.5 bits (63), Expect = 0.64
Identities = 48/211 (22%), Positives = 92/211 (43%), Gaps = 12/211 (5%)
Frame = -1
Query: 761 EKLQE-LAPIPDLLKA----TQMRLKDAQQAQAIAEHNAEQLARELNCAREKVHVLLHNS 597
EKLQ + P+ LK T +R+++ + Q + ++ L +LN + + + L+
Sbjct: 233 EKLQSSIVHSPEKLKGKIADTSLRIQNDRSQQVELDKKSKILHTKLN-SLQLIEGDLNAC 291
Query: 596 LKPPEKP-PERGGDEKQMALL--NQRI-SQLAENNISLKSEIERLKASVIRTEESALANE 429
LK E+ E E LL NQ + Q+ N L+ E+L + +E L +E
Sbjct: 292 LKVLEECLVELDKLEHATVLLSTNQELCDQIEINKKKLEFRKEQLLKQLSNAQEK-LEHE 350
Query: 428 KRLQEKMHECAQLGGELDRTRDEASRALQRAH---EQTETVRKCLQTTVAELERQLAASR 258
+ + + E A+ +D R+E Q + ++TE ++ T ++
Sbjct: 351 QHSRNQKLEAAKQ--RMDNIREEYKVITQERNKKIQETEKKNAMIEMTEQKIAGMREELE 408
Query: 257 AQVSTAEKEREELKNRLHWQMKRLTENFEQA 165
+Q+S+ E E+LK+ + + L N +
Sbjct: 409 SQISSITMEFEKLKSHVELYIAELLRNLRSS 439
Score = 27.1 bits (57), Expect = 3.4
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = -1
Query: 497 LKSEIERLKASVIRTEESALANEKRLQEKMHE---CAQLGGELDRTRDEASRALQRAHEQ 327
L S+ +L++ I +++ NE+ Q + + C+Q+ E DR R EAS R H
Sbjct: 163 LLSQDRKLESEAI-IKQNEERNEEMFQSLIEDKRLCSQVRTEYDRIRMEASELKIRYH-- 219
Query: 326 TETVRKCLQTTVAELER 276
V + +T+ E+E+
Sbjct: 220 --NVDSLMASTLEEIEK 234
>SPAC343.11c |msc1||multi-copy suppressor of Chk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1588
Score = 29.5 bits (63), Expect = 0.64
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 680 PALAERPSASSESLSTDRGSEPTLGVSLGTSA*PFEFPS*SVRLFWCCPYPSCPSVGA 853
PA A + S + S S +G E + ++L + S FWCC +PS S +
Sbjct: 396 PASARQSSRRTRSTS-GKGFETKISINLDSDIKLLNTLSPLETFFWCCSFPSTASTSS 452
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 28.7 bits (61), Expect = 1.1
Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 3/116 (2%)
Frame = -1
Query: 557 EKQMALLNQRISQL---AENNISLKSEIERLKASVIRTEESALANEKRLQEKMHECAQLG 387
E Q+ L + QL A+N K+E E+L V EE N+K L+E
Sbjct: 54 ESQLEELEEETKQLRLKADNEDIQKTEAEQLSRKVELLEEELETNDKLLRETT------- 106
Query: 386 GELDRTRDEASRALQRAHEQTETVRKCLQTTVAELERQLAASRAQVSTAEKEREEL 219
E R D + +R + E R ++ + E+ + +A++ + E+L
Sbjct: 107 -EKMRQTDVKAEHFERRVQSLERERDDMEQKLEEMTDKYTKVKAELDEVHQALEDL 161
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 28.7 bits (61), Expect = 1.1
Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 5/130 (3%)
Frame = -1
Query: 572 ERGGDEKQMALLNQRISQLAENNISLKSEIERLKA---SVIRTEESALANEKRLQEKMHE 402
E+ ++ LL ++I + + + + E+ L++ SV+ TE+ E+R+ E E
Sbjct: 742 EQAKFKRDEQLLVEKIEGIKKRILLKRREVNSLESQELSVLDTEKIQTL-ERRISETEKE 800
Query: 401 CAQLGGELDRTRDEASRALQRAHEQTETVRKCLQTTVAELERQLAASRAQVSTA--EKER 228
G+L ++E R E +R + E +R L++ + ++S EK
Sbjct: 801 LESYAGQLQDAKNEEHRIRDNQRPVIEEIRIYREKIQTETQR-LSSLQTELSRLRDEKRN 859
Query: 227 EELKNRLHWQ 198
E+ H Q
Sbjct: 860 SEVDIERHRQ 869
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 231 TGRAEKPIALANEASDGELRAGPAPDPRSADAGAVP 124
T + + P+A N AS G L P P + G+VP
Sbjct: 627 TAKGKNPLAAENHASGGRLPKVPIPPLSNMRRGSVP 662
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 27.9 bits (59), Expect = 2.0
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -3
Query: 363 RGLAGAAESPRANGNCAEVPPNHGSRAGTTAGGLQGTS-QHRREGTGRAEKP 211
R LA A + RAN + P R G +AGG+ S ++ R G R P
Sbjct: 858 RKLAEKAAARRANIGASSPSPGAWRRGGASAGGVSRDSPRYSRGGYSRGSVP 909
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/56 (23%), Positives = 32/56 (57%)
Frame = -1
Query: 806 EQINLEIQRVKLKFQEKLQELAPIPDLLKATQMRLKDAQQAQAIAEHNAEQLAREL 639
E+ NL + +++ Q + + + IP+++ +LKD ++++A+ E E++ L
Sbjct: 472 EKRNLVLDCLEV-LQISVDDTSNIPEIIARLSEKLKDREESEAVTEDLIEEVVNRL 526
>SPAC31A2.10 |||RanGTP-binding protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 460
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -1
Query: 809 SEQINLEIQRVKLKFQEKLQELAPIPDLLKATQMR 705
S Q NLE+ VK + ++K+Q + P DL++ R
Sbjct: 47 SSQFNLEL--VKSRLEQKIQAITPAVDLIQLVAAR 79
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 27.5 bits (58), Expect = 2.6
Identities = 42/215 (19%), Positives = 93/215 (43%), Gaps = 8/215 (3%)
Frame = -1
Query: 725 LKATQMRLKDAQQA-QAIAEHNAEQ--LARELNCAREKVHVLLHNSLKPPEKP--PERGG 561
++ +M + QQA +AI AEQ +A+E A+++ + L E+ RG
Sbjct: 369 MERQRMAAQQHQQALEAIQMAQAEQQRIAQE-QLAQQQFQMQTQGQLAELEQQLLATRGQ 427
Query: 560 DEKQMALLNQRISQLAENNISLKSEIERLKASVIRTEE--SALANEKRLQEKMHEC-AQL 390
E+ LLNQ +++ L L+ + + ++ +L N+ + +E A+L
Sbjct: 428 LEQSNVLLNQYDARVRTLENELSQAGVNLQEQIHQNDDLIESLKNQILTWKNKYEALAKL 487
Query: 389 GGELDRTRDEASRALQRAHEQTETVRKCLQTTVAELERQLAASRAQVSTAEKEREELKNR 210
+L + + ++ + + ++ + ++ER++ +++ ER+ ++
Sbjct: 488 YTQLRQEHLDLLSKYKQIQLKASSAQEAIDKK-EKMEREMKNKNLELADMILERDRARHE 546
Query: 209 LHWQMKRLTENFEQAQLRILGLQTQVQSLRRTASS 105
L + + E + + LQ + SL R SS
Sbjct: 547 LETMHRSQRDKQESTERELRLLQEKAASLERNKSS 581
>SPBC839.08c |its8||pig-N |Schizosaccharomyces pombe|chr 2|||Manual
Length = 935
Score = 27.5 bits (58), Expect = 2.6
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 633 AVELPSELLCVVLSDGLRLLSVLQPH 710
A E P++ L +++ DGLR +LQPH
Sbjct: 38 AGEAPAKRLFLIVGDGLRPDKLLQPH 63
>SPCC553.09c |spb70|pol12|DNA polymerase alpha
B-subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 574
Score = 27.1 bits (57), Expect = 3.4
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 309 LPHSFRLLVGSLQRPRGLVPGAVQLSPKLGTFVHLLLKPL 428
LP R V +++ L PG LGTF L + PL
Sbjct: 509 LPSDLRYFVKNVENVVSLNPGKATKGINLGTFAKLTIAPL 548
>SPBC1921.03c |mex67||mRNA export receptor Mex67|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 596
Score = 27.1 bits (57), Expect = 3.4
Identities = 27/96 (28%), Positives = 41/96 (42%)
Frame = -1
Query: 569 RGGDEKQMALLNQRISQLAENNISLKSEIERLKASVIRTEESALANEKRLQEKMHECAQL 390
+G DE + AL+NQ S A +IS L AS +RT S + K+ + L
Sbjct: 348 KGWDENRSALVNQLYSPNATFSIS-------LNASNVRTNFSQKTDTKKWGAYKMKSRNL 400
Query: 389 GGELDRTRDEASRALQRAHEQTETVRKCLQTTVAEL 282
+++ E+ L HE+ K L T +L
Sbjct: 401 --LYSQSQKESKSRLFNGHEEISNAVKSLPATAHDL 434
>SPAC664.03 |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 6.0
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = -1
Query: 620 VHVLLHNSLKPPEKPPER---GGDEKQMALLNQRISQLAENNISLKSEIE 480
+ V HN L PP PP+ KQ AL N + + E I ++++IE
Sbjct: 11 LRVRYHNPLPPPPFPPKLINIPNPVKQYALPNFVSTLVQEKKIPIENDIE 60
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 6.0
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = -1
Query: 479 RLKASVIRTEESALANEKRLQEKMHECAQLGGELDRTRDEASRALQRAHEQTETVRKCL 303
R+ + + +A A ++ L + C +L + + S L H Q TV++CL
Sbjct: 315 RIDGQFLDEQGNAPAGQRILLYLLRRCYAYIYQLLSSSEPVSEELMAVHNQLRTVKRCL 373
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 26.2 bits (55), Expect = 6.0
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -1
Query: 374 RTRDEASRALQRAHEQTETVRKCLQTTVAELERQLAASRAQVSTAEKEREEL-KNRLHWQ 198
R D A + A R+ + LER+L R ++ E+E++E K RL
Sbjct: 389 RLPDSAIDLVDEAAAAVRVTRESQPEVLDNLERKLRQLRVEIRALEREKDEASKERLKAA 448
Query: 197 MKRLTENFEQAQ 162
K + E+ +
Sbjct: 449 RKEAEQVEEETR 460
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 266 PPAVVPALLPWFGGTSAQFPFARGLSAAPARPRPWCGPTLPQA 394
PP +P + P +SA A+ P+ P+P P +P+A
Sbjct: 484 PPPAMPKVFPERDISSASQKAAQPSVITPSVPQPPAAPVVPEA 526
>SPCC1620.10 |cwf26||complexed with Cdc5 protein Cwf26
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 305
Score = 26.2 bits (55), Expect = 6.0
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Frame = -1
Query: 383 ELDRTRDEASRALQRAHEQTETVRKCLQTT--VAELERQLAASRAQVSTAEKEREELKNR 210
E R E +R EQ + V + Q + ELERQ A+ + +ELK R
Sbjct: 173 EAKRKLKEKEEEARRQKEQQQGVVQVRQQKEYLKELERQKTVPLARYEDDPEYNKELKER 232
Query: 209 LHW 201
W
Sbjct: 233 SRW 235
>SPAC17G6.07c |||SNARE Slt1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 222
Score = 26.2 bits (55), Expect = 6.0
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = -1
Query: 821 NTRISEQINLEIQRVKLKFQEKLQELAPIPDLLKATQMR-LKDAQQAQAIAEHNAEQLAR 645
N + +++ +E +++K K QEK I L++ Q R L++ QQ + NA+ L
Sbjct: 72 NVTMEKKLKIEEKKIKSK-QEK-----EIAHALQSIQERELRERQQMSNVEASNAQLLTN 125
Query: 644 ELNCAREKVHVLLH 603
+ + E LLH
Sbjct: 126 QRSMQTEISESLLH 139
>SPAC1071.02 |||TFIIH regulator |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1018
Score = 25.8 bits (54), Expect = 7.9
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 560 DEKQMALLNQRISQLAENNISLKSEIERLKASVIRTEESAL 438
D+ ++AL ++ A + + L + ERLKAS +R + AL
Sbjct: 232 DDLKIALRETLVANDAFSKLLLPALFERLKASTVRIKIDAL 272
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.8 bits (54), Expect = 7.9
Identities = 34/184 (18%), Positives = 77/184 (41%), Gaps = 13/184 (7%)
Frame = -1
Query: 590 PPEKPPERGGDEKQMALLNQRISQLAENNISLKSEIERLKASVIRTEESALANEKR--LQ 417
PP PP + L ++ + + + L +R+K ++ +E A +KR L+
Sbjct: 14 PPTSPPNTTSSDDFAVLKEPKVEAILNSELGLAILNDRIKDYLLTCKELAGFFKKRSILE 73
Query: 416 EK----MHECAQLGGELDRTRDEASRALQRAHEQTETVRKCLQTTVAELERQLAASRAQV 249
E+ + + A+ E +++ + ++ + + + + L L++ L+A QV
Sbjct: 74 EESGKNLQKLAKSYLETFQSKHHSPQSFSASVITSMEIHEQLANHSLTLQKTLSAFSDQV 133
Query: 248 ----STAEKEREELKNRLHWQMKRLTE---NFEQAQLRILGLQTQVQSLRRTASSTGDGD 90
AE++R+ +K Q E ++++ R G +T+ R + GD
Sbjct: 134 IEFHKNAERKRKSIKEYAKKQENAYLEAVMQMDKSKSRFKGAETE---YNRALDNKNTGD 190
Query: 89 GENQ 78
+ +
Sbjct: 191 SQKK 194
>SPAC6B12.05c |||chromatin remodeling complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 295
Score = 25.8 bits (54), Expect = 7.9
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -1
Query: 572 ERGGDEKQMALLNQRISQLAENNISLKSEIERLKASVIRTEESALANEKRLQEKMHE 402
E GD+ A Q + E +L+ + + +I EESA +E+ L+E+ E
Sbjct: 32 EELGDDALAAEEGQSVLDEQEIEEALEEDDTNYEEDIIDDEESAQVDEEELEEEEEE 88
>SPBC19G7.10c |||topoisomerase associated protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 744
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 678 GLRLLSVLQPHLSRFQQI 731
G+RLL L PHLS+ QQI
Sbjct: 531 GMRLLPRLFPHLSKEQQI 548
>SPAC24C9.05c |mug70||conserved protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 730
Score = 25.8 bits (54), Expect = 7.9
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -1
Query: 317 VRKCLQTTVAELERQLAASRAQVSTAEKEREELKNR 210
+R CL+ + + RQ A++ V E +EE++N+
Sbjct: 187 MRACLREPLNRIARQQEAAQKLVEALEGAQEEIENK 222
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,211,239
Number of Sequences: 5004
Number of extensions: 62502
Number of successful extensions: 323
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 318
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 428468660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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