Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11a02
(851 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 513 e-146
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 508 e-144
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 508 e-144
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 502 e-142
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 501 e-142
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 499 e-142
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 275 3e-74
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 275 3e-74
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 217 6e-57
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 217 1e-56
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 216 1e-56
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 216 1e-56
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 216 1e-56
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 216 1e-56
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 216 2e-56
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 216 2e-56
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 215 3e-56
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 215 3e-56
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 213 1e-55
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 213 1e-55
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 210 1e-54
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 210 1e-54
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 204 8e-53
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 196 1e-50
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 81 1e-15
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 81 1e-15
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 62 6e-10
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 36 0.028
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 33 0.20
AF067608-8|AAC17647.1| 432|Caenorhabditis elegans Eukaryotic in... 32 0.60
Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical p... 31 1.0
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 4.2
U40420-1|AAA81430.1| 2214|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z75529-7|CAE54888.1| 382|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z75529-6|CAA99785.1| 269|Caenorhabditis elegans Hypothetical pr... 28 9.7
U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical pr... 28 9.7
U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protei... 28 9.7
DQ812088-1|ABG89384.1| 530|Caenorhabditis elegans mammalian str... 28 9.7
AC024823-2|AAF59596.3| 530|Caenorhabditis elegans Hypothetical ... 28 9.7
AC024823-1|AAL32257.1| 510|Caenorhabditis elegans Hypothetical ... 28 9.7
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 513 bits (1265), Expect = e-146
Identities = 234/246 (95%), Positives = 245/246 (99%)
Frame = -2
Query: 829 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 650
EPYNATLSVHQLVENTDE++CIDNEALYDICFRTLKLTTPTYGDLNHLVS TMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMTMSGVTTCL 240
Query: 649 RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 470
RFPGQLNADLRKLAVNMVPFPRLHFF+PGFAPLTSRGSQQYR+LTVPELTQQMFDAKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRSLTVPELTQQMFDAKNMM 300
Query: 469 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRG 290
AACDPRHGRYLTVAA+FRGRMSMKEVDEQM+N+QNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301 AACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360
Query: 289 LKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 110
+KM+ATF+GNSTAIQELFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 VKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 109 EYQQYQ 92
EYQQYQ
Sbjct: 421 EYQQYQ 426
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 508 bits (1254), Expect = e-144
Identities = 233/246 (94%), Positives = 242/246 (98%)
Frame = -2
Query: 829 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 650
EPYNATLSVHQLVENTD ++CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 649 RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 470
RFPGQLNADLRKLAVNMVPFPRLHFF+PGFAPLTSR +QQYRA+TVPELTQQ FDAKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRSNQQYRAITVPELTQQCFDAKNMM 300
Query: 469 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRG 290
AACDPRHGRYLT AA+FRGRMSMKEVDEQM+NIQNKNSSYFV+WIPNNVKTAVCDIPPRG
Sbjct: 301 AACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRG 360
Query: 289 LKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 110
LKMSATFIGNSTAIQELFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 109 EYQQYQ 92
EYQQYQ
Sbjct: 421 EYQQYQ 426
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 508 bits (1254), Expect = e-144
Identities = 233/246 (94%), Positives = 242/246 (98%)
Frame = -2
Query: 829 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 650
EPYNATLSVHQLVENTD ++CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 649 RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 470
RFPGQLNADLRKLAVNMVPFPRLHFF+PGFAPLTSR +QQYRA+TVPELTQQ FDAKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRSNQQYRAITVPELTQQCFDAKNMM 300
Query: 469 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRG 290
AACDPRHGRYLT AA+FRGRMSMKEVDEQM+NIQNKNSSYFV+WIPNNVKTAVCDIPPRG
Sbjct: 301 AACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRG 360
Query: 289 LKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 110
LKMSATFIGNSTAIQELFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 109 EYQQYQ 92
EYQQYQ
Sbjct: 421 EYQQYQ 426
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 502 bits (1237), Expect = e-142
Identities = 229/246 (93%), Positives = 242/246 (98%)
Frame = -2
Query: 829 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 650
EPYNATLSVHQLVENTDE++CIDNEALYDICFRTLKL+ PTYGDLNHLVS TMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLSNPTYGDLNHLVSVTMSGVTTCL 240
Query: 649 RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 470
RFPGQLNADLRKLAVNMVPFPRLHFF+PGFAPL+++G+Q YRALTV ELTQQMFDAKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGAQAYRALTVAELTQQMFDAKNMM 300
Query: 469 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRG 290
AACDPRHGRYLTVAA+FRGRMSM+EVD+QMMN+QNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301 AACDPRHGRYLTVAAMFRGRMSMREVDDQMMNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360
Query: 289 LKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 110
LKMSATFIGNSTAIQELFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 109 EYQQYQ 92
EYQQYQ
Sbjct: 421 EYQQYQ 426
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 501 bits (1236), Expect = e-142
Identities = 227/246 (92%), Positives = 242/246 (98%)
Frame = -2
Query: 829 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 650
EPYNATLSVHQLVENTDE+YCIDNEALYDIC+RTLKLT PTYGDLNHLVS TMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNPTYGDLNHLVSLTMSGVTTCL 240
Query: 649 RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 470
RFPGQLNADLRKLAVNMVPFPRLHFF+PGFAPL+++G+Q YRALTV ELTQQMFDAKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGTQAYRALTVAELTQQMFDAKNMM 300
Query: 469 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRG 290
AACDPRHGRYLTVAA+FRGRMSM+EVDEQM+N+QNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301 AACDPRHGRYLTVAAMFRGRMSMREVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360
Query: 289 LKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 110
LKM+ATF+GNSTAIQELFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL+S
Sbjct: 361 LKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLIS 420
Query: 109 EYQQYQ 92
EYQQYQ
Sbjct: 421 EYQQYQ 426
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 499 bits (1231), Expect = e-142
Identities = 226/246 (91%), Positives = 242/246 (98%)
Frame = -2
Query: 829 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 650
EPYNATLSVHQLVENTDE+YCIDNEALYDIC+RTLKLT PTYGDLNHLVS TMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNPTYGDLNHLVSLTMSGVTTCL 240
Query: 649 RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 470
RFPGQLNADLRKLAVNMVPFPRLHFF+PGFAPL+++G+Q YRALTV ELTQQMFDAKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGAQAYRALTVAELTQQMFDAKNMM 300
Query: 469 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRG 290
AACDPRHGRYLTVAA+FRGRMSM+EVDEQM+++QNKNSSYFVEWIPNNVKTAVCDIPPRG
Sbjct: 301 AACDPRHGRYLTVAAMFRGRMSMREVDEQMLSVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360
Query: 289 LKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 110
LKM+ATF+GNSTAIQELFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL+S
Sbjct: 361 LKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLIS 420
Query: 109 EYQQYQ 92
EYQQYQ
Sbjct: 421 EYQQYQ 426
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 275 bits (674), Expect = 3e-74
Identities = 131/247 (53%), Positives = 179/247 (72%), Gaps = 1/247 (0%)
Frame = -2
Query: 829 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTP-TYGDLNHLVSATMSGVTTC 653
EPYNA LS+ L++N DE++CIDNEA++DIC LKL TYGDLNHL S +SG+TT
Sbjct: 181 EPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYGDLNHLASLALSGITTF 240
Query: 652 LRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNM 473
RF G L D+RKL N PRLHFF+ FAP+ +G +A ++ +LTQQ+ DAKN+
Sbjct: 241 QRFKGNLKTDIRKL--NTAGSPRLHFFMTSFAPVYGKGIIDCQAFSISDLTQQVLDAKNI 298
Query: 472 MAACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPR 293
M C+ G++L+ A ++RG+ + K+ EQ+++++N++ S +E +P + T VCDIP R
Sbjct: 299 MT-CNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENEDPSEMIESLPKSTNTDVCDIPSR 357
Query: 292 GLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 113
GLK SATFI NSTAIQE KR+S+QF +FRRKAFLHWYT M+E EFT+AE+ +NDL+
Sbjct: 358 GLKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLI 414
Query: 112 SEYQQYQ 92
SE+QQY+
Sbjct: 415 SEFQQYE 421
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 275 bits (674), Expect = 3e-74
Identities = 131/247 (53%), Positives = 179/247 (72%), Gaps = 1/247 (0%)
Frame = -2
Query: 829 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTP-TYGDLNHLVSATMSGVTTC 653
EPYNA LS+ L++N DE++CIDNEA++DIC LKL TYGDLNHL S +SG+TT
Sbjct: 181 EPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYGDLNHLASLALSGITTF 240
Query: 652 LRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNM 473
RF G L D+RKL N PRLHFF+ FAP+ +G +A ++ +LTQQ+ DAKN+
Sbjct: 241 QRFKGNLKTDIRKL--NTAGSPRLHFFMTSFAPVYGKGIIDCQAFSISDLTQQVLDAKNI 298
Query: 472 MAACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPR 293
M C+ G++L+ A ++RG+ + K+ EQ+++++N++ S +E +P + T VCDIP R
Sbjct: 299 MT-CNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENEDPSEMIESLPKSTNTDVCDIPSR 357
Query: 292 GLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 113
GLK SATFI NSTAIQE KR+S+QF +FRRKAFLHWYT M+E EFT+AE+ +NDL+
Sbjct: 358 GLKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLI 414
Query: 112 SEYQQYQ 92
SE+QQY+
Sbjct: 415 SEFQQYE 421
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 217 bits (531), Expect = 6e-57
Identities = 99/252 (39%), Positives = 153/252 (60%), Gaps = 8/252 (3%)
Frame = -2
Query: 829 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 650
EPYN+ L+ H +E++D S+ +DNEA+YDIC R L L PTY +LN L++ +S VT L
Sbjct: 188 EPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDLARPTYTNLNRLIAQVISSVTASL 247
Query: 649 RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 470
RF G LN DL + N+VP+PR+HF + +AP+ S + +TV E+TQQ F+ M
Sbjct: 248 RFDGALNVDLTEFQTNLVPYPRIHFPLTTYAPIISAEKAYHEQMTVAEITQQCFEPGAQM 307
Query: 469 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP-- 296
CDPR G+Y+ ++RG + K+V+ + +++ K S FV+W P K + PP
Sbjct: 308 VKCDPRRGKYMACCLLYRGDVVPKDVNAAIASVKTKRSIQFVDWCPTGFKVGINYQPPTV 367
Query: 295 ------RGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 134
L+ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 368 VPGADLSKLQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR 427
Query: 133 SNMNDLVSEYQQ 98
++ L +Y++
Sbjct: 428 EDLAALEKDYEE 439
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 217 bits (529), Expect = 1e-56
Identities = 98/252 (38%), Positives = 157/252 (62%), Gaps = 8/252 (3%)
Frame = -2
Query: 829 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 650
EPYN+ L+ H +E++D S+ +DNEA+YDIC R L+++ PTY +LN ++S +S +T L
Sbjct: 180 EPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLRVSRPTYNNLNRIISQVVSSITASL 239
Query: 649 RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 470
RF G LN DL + N+VP+PR+HF + + PL S S + L+V E+T+ F+A N M
Sbjct: 240 RFDGALNVDLNEFQTNLVPYPRIHFPLVAYNPLIS--SAHHEFLSVDEITKSCFEASNQM 297
Query: 469 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP-- 296
CDP+HG+Y+ V ++RG + K+V + +I+ + S FV+W P K + PP
Sbjct: 298 VKCDPKHGKYMAVCLLYRGDVVPKDVSAAIKSIKTQRSVQFVDWCPTGFKVGLNYQPPTV 357
Query: 295 ------RGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 134
+ + + N+TAI E ++R+ +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 358 IPGGDMAKVPRAVCMLSNTTAIAEAWQRLDYKFDLMYAKRAFVHWYVGEGMEEGEFSEAR 417
Query: 133 SNMNDLVSEYQQ 98
++ L +Y++
Sbjct: 418 EDLAALEKDYEE 429
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 216 bits (528), Expect = 1e-56
Identities = 98/252 (38%), Positives = 151/252 (59%), Gaps = 8/252 (3%)
Frame = -2
Query: 829 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 650
EPYN+ L+ H +E++D S+ +DNEA+YDIC R L + P+Y +LN L+ +S +T L
Sbjct: 183 EPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASL 242
Query: 649 RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 470
RF G LN DL + N+VP+PR+HF + F+P+ S + L+V E+T F+ N M
Sbjct: 243 RFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPHNQM 302
Query: 469 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP-- 296
CDPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W P K + PP
Sbjct: 303 VKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTV 362
Query: 295 ------RGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 134
+ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 363 VPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR 422
Query: 133 SNMNDLVSEYQQ 98
++ L +Y++
Sbjct: 423 EDLAALEKDYEE 434
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 216 bits (528), Expect = 1e-56
Identities = 98/252 (38%), Positives = 151/252 (59%), Gaps = 8/252 (3%)
Frame = -2
Query: 829 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 650
EPYN+ L+ H +E++D S+ +DNEA+YDIC R L + P+Y +LN L+ +S +T L
Sbjct: 182 EPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASL 241
Query: 649 RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 470
RF G LN DL + N+VP+PR+HF + F+P+ S + L+V E+T F+ N M
Sbjct: 242 RFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPHNQM 301
Query: 469 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP-- 296
CDPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W P K + PP
Sbjct: 302 VKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTV 361
Query: 295 ------RGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 134
+ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 362 VPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR 421
Query: 133 SNMNDLVSEYQQ 98
++ L +Y++
Sbjct: 422 EDLAALEKDYEE 433
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 216 bits (528), Expect = 1e-56
Identities = 98/252 (38%), Positives = 151/252 (59%), Gaps = 8/252 (3%)
Frame = -2
Query: 829 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 650
EPYN+ L+ H +E++D S+ +DNEA+YDIC R L + P+Y +LN L+ +S +T L
Sbjct: 183 EPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASL 242
Query: 649 RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 470
RF G LN DL + N+VP+PR+HF + F+P+ S + L+V E+T F+ N M
Sbjct: 243 RFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPHNQM 302
Query: 469 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP-- 296
CDPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W P K + PP
Sbjct: 303 VKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTV 362
Query: 295 ------RGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 134
+ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 363 VPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR 422
Query: 133 SNMNDLVSEYQQ 98
++ L +Y++
Sbjct: 423 EDLAALEKDYEE 434
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 216 bits (528), Expect = 1e-56
Identities = 98/252 (38%), Positives = 151/252 (59%), Gaps = 8/252 (3%)
Frame = -2
Query: 829 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 650
EPYN+ L+ H +E++D S+ +DNEA+YDIC R L + P+Y +LN L+ +S +T L
Sbjct: 183 EPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASL 242
Query: 649 RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 470
RF G LN DL + N+VP+PR+HF + F+P+ S + L+V E+T F+ N M
Sbjct: 243 RFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPHNQM 302
Query: 469 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP-- 296
CDPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W P K + PP
Sbjct: 303 VKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTV 362
Query: 295 ------RGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 134
+ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 363 VPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR 422
Query: 133 SNMNDLVSEYQQ 98
++ L +Y++
Sbjct: 423 EDLAALEKDYEE 434
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 216 bits (527), Expect = 2e-56
Identities = 96/252 (38%), Positives = 152/252 (60%), Gaps = 8/252 (3%)
Frame = -2
Query: 829 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 650
EPYN+ L+ H +E++D ++ +DNEA+YDIC R L + P+Y +LN ++S +S +T L
Sbjct: 181 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRPSYTNLNRIISQVVSSITASL 240
Query: 649 RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 470
RF G LN DL + N+VP+PR+HF + + PL S + AL+V ++T F+ N M
Sbjct: 241 RFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKAYHEALSVNDITNSCFEPANQM 300
Query: 469 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP-- 296
CDPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 301 VKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTV 360
Query: 295 ------RGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 134
+ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA
Sbjct: 361 VPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAR 420
Query: 133 SNMNDLVSEYQQ 98
++ L +Y++
Sbjct: 421 EDLAALEKDYEE 432
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 216 bits (527), Expect = 2e-56
Identities = 96/252 (38%), Positives = 152/252 (60%), Gaps = 8/252 (3%)
Frame = -2
Query: 829 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 650
EPYN+ L+ H +E++D ++ +DNEA+YDIC R L + P+Y +LN ++S +S +T L
Sbjct: 181 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRPSYTNLNRIISQVVSSITASL 240
Query: 649 RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 470
RF G LN DL + N+VP+PR+HF + + PL S + AL+V ++T F+ N M
Sbjct: 241 RFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKAYHEALSVNDITNSCFEPANQM 300
Query: 469 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP-- 296
CDPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 301 VKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTV 360
Query: 295 ------RGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 134
+ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA
Sbjct: 361 VPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAR 420
Query: 133 SNMNDLVSEYQQ 98
++ L +Y++
Sbjct: 421 EDLAALEKDYEE 432
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 215 bits (526), Expect = 3e-56
Identities = 96/252 (38%), Positives = 152/252 (60%), Gaps = 8/252 (3%)
Frame = -2
Query: 829 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 650
EPYN+ L+ H +E++D ++ +DNEA+YDIC R L + P+Y +LN ++S +S +T L
Sbjct: 181 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNLNRIISQVVSSITASL 240
Query: 649 RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 470
RF G LN DL + N+VP+PR+HF + + PL S + AL+V ++T F+ N M
Sbjct: 241 RFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYHEALSVSDITNSCFEPANQM 300
Query: 469 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP-- 296
CDPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 301 VKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTV 360
Query: 295 ------RGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 134
+ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA
Sbjct: 361 VPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAR 420
Query: 133 SNMNDLVSEYQQ 98
++ L +Y++
Sbjct: 421 EDLAALEKDYEE 432
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 215 bits (526), Expect = 3e-56
Identities = 96/252 (38%), Positives = 152/252 (60%), Gaps = 8/252 (3%)
Frame = -2
Query: 829 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 650
EPYN+ L+ H +E++D ++ +DNEA+YDIC R L + P+Y +LN ++S +S +T L
Sbjct: 181 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNLNRIISQVVSSITASL 240
Query: 649 RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 470
RF G LN DL + N+VP+PR+HF + + PL S + AL+V ++T F+ N M
Sbjct: 241 RFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYHEALSVSDITNSCFEPANQM 300
Query: 469 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP-- 296
CDPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 301 VKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTV 360
Query: 295 ------RGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 134
+ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA
Sbjct: 361 VPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAR 420
Query: 133 SNMNDLVSEYQQ 98
++ L +Y++
Sbjct: 421 EDLAALEKDYEE 432
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 213 bits (521), Expect = 1e-55
Identities = 96/252 (38%), Positives = 152/252 (60%), Gaps = 8/252 (3%)
Frame = -2
Query: 829 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 650
EPYN+ L+ H +E++D ++ +DNEA+YDIC R L + P+Y +LN ++S +S +T L
Sbjct: 181 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTNLNRIISQVVSSITASL 240
Query: 649 RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 470
RF G LN DL + N+VP+PR+HF + + PL S + AL+V ++T F+ N M
Sbjct: 241 RFDGALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKAYHEALSVNDITNSCFEPANQM 300
Query: 469 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP-- 296
CDPR+G+Y+ V ++RG + K+V+ + I+ K S FV+W P K + PP
Sbjct: 301 VKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQPPTV 360
Query: 295 ------RGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 134
+ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA
Sbjct: 361 VPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAR 420
Query: 133 SNMNDLVSEYQQ 98
++ L +Y++
Sbjct: 421 EDLAALEKDYEE 432
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 213 bits (521), Expect = 1e-55
Identities = 96/252 (38%), Positives = 152/252 (60%), Gaps = 8/252 (3%)
Frame = -2
Query: 829 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 650
EPYN+ L+ H +E++D ++ +DNEA+YDIC R L + P+Y +LN ++S +S +T L
Sbjct: 181 EPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTNLNRIISQVVSSITASL 240
Query: 649 RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 470
RF G LN DL + N+VP+PR+HF + + PL S + AL+V ++T F+ N M
Sbjct: 241 RFDGALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKAYHEALSVNDITNSCFEPANQM 300
Query: 469 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP-- 296
CDPR+G+Y+ V ++RG + K+V+ + I+ K S FV+W P K + PP
Sbjct: 301 VKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQPPTV 360
Query: 295 ------RGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 134
+ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA
Sbjct: 361 VPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAR 420
Query: 133 SNMNDLVSEYQQ 98
++ L +Y++
Sbjct: 421 EDLAALEKDYEE 432
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 210 bits (512), Expect = 1e-54
Identities = 98/252 (38%), Positives = 148/252 (58%), Gaps = 8/252 (3%)
Frame = -2
Query: 829 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 650
EPYN+ L H +E++D ++ +DNEA+YDIC R L L PTY +LN LV+ +S +T L
Sbjct: 189 EPYNSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDLARPTYTNLNRLVAQIISSITASL 248
Query: 649 RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 470
RF G LN DL + N+VP+PR+HF + +APL S + TV ++T F+ M
Sbjct: 249 RFEGALNVDLTEFQTNLVPYPRIHFPLVTYAPLVSAERASHEQNTVSDMTHACFEPGYQM 308
Query: 469 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRG 290
CDPR G+Y+ V ++RG + K+++ + ++ K + FVEW P K + PP
Sbjct: 309 VKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTV 368
Query: 289 L--------KMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 134
+ S I N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 369 VPGGDLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR 428
Query: 133 SNMNDLVSEYQQ 98
+M L +Y++
Sbjct: 429 EDMAALEKDYEE 440
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 210 bits (512), Expect = 1e-54
Identities = 98/252 (38%), Positives = 148/252 (58%), Gaps = 8/252 (3%)
Frame = -2
Query: 829 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 650
EPYN+ L H +E++D ++ +DNEA+YDIC R L L PTY +LN LV+ +S +T L
Sbjct: 161 EPYNSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDLARPTYTNLNRLVAQIISSITASL 220
Query: 649 RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 470
RF G LN DL + N+VP+PR+HF + +APL S + TV ++T F+ M
Sbjct: 221 RFEGALNVDLTEFQTNLVPYPRIHFPLVTYAPLVSAERASHEQNTVSDMTHACFEPGYQM 280
Query: 469 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRG 290
CDPR G+Y+ V ++RG + K+++ + ++ K + FVEW P K + PP
Sbjct: 281 VKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTV 340
Query: 289 L--------KMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 134
+ S I N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 341 VPGGDLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR 400
Query: 133 SNMNDLVSEYQQ 98
+M L +Y++
Sbjct: 401 EDMAALEKDYEE 412
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 204 bits (497), Expect = 8e-53
Identities = 94/252 (37%), Positives = 151/252 (59%), Gaps = 8/252 (3%)
Frame = -2
Query: 829 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 650
EPYN+ L+ H +E++D S+ +DNEA+Y+I L + +PTY LN L++ +S +T L
Sbjct: 183 EPYNSLLTTHTTLEHSDCSFIMDNEAIYEITKVNLGVRSPTYTHLNRLLAQVVSSITASL 242
Query: 649 RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 470
RF G LN DL + N+VP+PR+HF + +AP+ S + L+V E+T F+ + M
Sbjct: 243 RFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVSEITNVCFEPGSQM 302
Query: 469 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP-- 296
CDPR+G+Y+ ++RG + KE++ + I+ K + FV+W P K + PP
Sbjct: 303 VKCDPRNGKYMACCLLYRGDVVPKEINSAISTIKTKRAIQFVDWCPTGFKVGINYQPPTV 362
Query: 295 ------RGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 134
L+ + + N+TAIQE + R+ +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 363 VPGGDMAKLQRAVCMLSNTTAIQEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR 422
Query: 133 SNMNDLVSEYQQ 98
+M L +Y++
Sbjct: 423 EDMAALEKDYEE 434
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 196 bits (479), Expect = 1e-50
Identities = 89/252 (35%), Positives = 147/252 (58%), Gaps = 8/252 (3%)
Frame = -2
Query: 829 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 650
EPYN+ L+ H +E +D S+ +DNEA+YD+C + L + P+Y +LN L++ +S +T L
Sbjct: 186 EPYNSILTTHTTLELSDCSFMVDNEAIYDLCRQKLHVERPSYSNLNRLIAQVVSSITASL 245
Query: 649 RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 470
RF G LN DL + N+VP+PR+HF + +AP+ S + L+V ++T F+ N M
Sbjct: 246 RFDGALNVDLNEFQTNLVPYPRIHFPLATYAPVISADRAHHEPLSVQDITHMCFEKANQM 305
Query: 469 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAV---CDIP 299
CDP G+Y+ V ++RG + K+V+ + +++ K FV+W P K + I
Sbjct: 306 VKCDPSAGKYMAVCLLYRGDVVPKDVNAAISSVKAKRGINFVDWCPTGFKVGINYQAPIT 365
Query: 298 PRG-----LKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 134
G + + + N+TAI E + R+ +F M+ ++AF+HW+ GEGM+E EF EA
Sbjct: 366 VEGGDLAKVHRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEAR 425
Query: 133 SNMNDLVSEYQQ 98
++ L +Y +
Sbjct: 426 DDLAALEKDYAE 437
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 80.6 bits (190), Expect = 1e-15
Identities = 59/250 (23%), Positives = 114/250 (45%), Gaps = 8/250 (3%)
Frame = -2
Query: 826 PYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR 647
PYN LS+ +L+EN D +DN AL+ + K TPT+ +N LV+ MS T R
Sbjct: 187 PYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTDTPTFDHINSLVARIMSTSTAPYR 246
Query: 646 FPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMA 467
F + +R L ++ PFP +HF +P+ R +V ++T+ + +MM
Sbjct: 247 FNSAMCPSIRYL--DLAPFPPMHFIQSAISPVVDPNENFTRKTSVADVTRFLLKPTSMMV 304
Query: 466 ACDPR---HGRYLTVAAVFRGRMSMKEV--DEQMMNIQNKNSSYFVEWIPNNVKTAVCDI 302
+ R + L+ +G++ + EQ ++ + +++ + +
Sbjct: 305 STASRVRPNDCMLSAYMFLQGQIEAHTIMTAEQNVDFAIRRPPFYMLKPLRMMHAPLSPY 364
Query: 301 PPRGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 122
K+S + NST++ LF+ + ++ + ++AF+ + E +D + M+
Sbjct: 365 VRPQYKVSGLLLNNSTSVAPLFESLLSKYDKLRSKRAFIDKF--EKIDNFSLDMMDDAMH 422
Query: 121 ---DLVSEYQ 101
DL+ EY+
Sbjct: 423 IVQDLLDEYK 432
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 80.6 bits (190), Expect = 1e-15
Identities = 59/250 (23%), Positives = 114/250 (45%), Gaps = 8/250 (3%)
Frame = -2
Query: 826 PYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR 647
PYN LS+ +L+EN D +DN AL+ + K TPT+ +N LV+ MS T R
Sbjct: 187 PYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTDTPTFDHINSLVARIMSTSTAPYR 246
Query: 646 FPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMA 467
F + +R L ++ PFP +HF +P+ R +V ++T+ + +MM
Sbjct: 247 FNSAMCPSIRYL--DLAPFPPMHFIQSAISPVVDPNENFTRKTSVADVTRFLLKPTSMMV 304
Query: 466 ACDPR---HGRYLTVAAVFRGRMSMKEV--DEQMMNIQNKNSSYFVEWIPNNVKTAVCDI 302
+ R + L+ +G++ + EQ ++ + +++ + +
Sbjct: 305 STASRVRPNDCMLSAYMFLQGQIEAHTIMTAEQNVDFAIRRPPFYMLKPLRMMHAPLSPY 364
Query: 301 PPRGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 122
K+S + NST++ LF+ + ++ + ++AF+ + E +D + M+
Sbjct: 365 VRPQYKVSGLLLNNSTSVAPLFESLLSKYDKLRSKRAFIDKF--EKIDNFSLDMMDDAMH 422
Query: 121 ---DLVSEYQ 101
DL+ EY+
Sbjct: 423 IVQDLLDEYK 432
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 61.7 bits (143), Expect = 6e-10
Identities = 24/57 (42%), Positives = 40/57 (70%)
Frame = -2
Query: 268 IGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 98
+ ++TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 13 LSDTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 69
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 36.3 bits (80), Expect = 0.028
Identities = 24/103 (23%), Positives = 43/103 (41%)
Frame = +1
Query: 406 TCDLGRQRPQSGSDRGADHKPPSCSSRQTSAASTPAPLAHGTADSRVTSEARNPV*KSAT 585
T +PQ + +G+ SS + AAS+ AP + GT S + + + +S+T
Sbjct: 1480 TSSASSTQPQMSTSQGSSAGSTVASSTASPAASSTAPSSTGTMSSTSSGTVGSTISESST 1539
Query: 586 VGTAPCSLLACADLHSTDQGTVDKSSRLTLSPKQDGSSRHKSG 714
+A + + S+ V SS + P+ S +G
Sbjct: 1540 TASASSQTGSTVTMGSSSTSGVSTSSASSTQPQMSTSQGSSAG 1582
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 33.5 bits (73), Expect = 0.20
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = +1
Query: 424 QRPQSGSDRGADHKPPSCSSRQTSAASTPAPLAHGTADSRVTSEARNPV*KS-ATVGTAP 600
++ +S SD D K P ++ TSA +TP P A S +S+ P K+ A P
Sbjct: 400 KKAESSSDSSDDEKKPV--AKPTSAKATPKPAAKKADSSSDSSDDEAPAKKTPAKAAPKP 457
Query: 601 CSLLACADLHST-DQGTVDKSSRLTLSPK 684
S A + S+ D+ KS+ ++PK
Sbjct: 458 ASKKAESSSDSSDDEKPAAKSTPAKITPK 486
Score = 31.1 bits (67), Expect = 1.0
Identities = 29/112 (25%), Positives = 43/112 (38%)
Frame = +1
Query: 421 RQRPQSGSDRGADHKPPSCSSRQTSAASTPAPLAHGTADSRVTSEARNPV*KSATVGTAP 600
++ S SD D K P ++ TSA +TP P A S +S+ P K V P
Sbjct: 612 KKAASSSSDSSDDEKKPV--AKPTSAKATPKPAAKKADSSSDSSDDEAPA-KKTPVKPTP 668
Query: 601 CSLLACADLHSTDQGTVDKSSRLTLSPKQDGSSRHKSGLLASACGSRYHTEP 756
++A S+D +K K S K +S+ S +P
Sbjct: 669 VKIVAKKVDSSSDSSDDEKKPTKATPVKVTPKSVTKKAAASSSDSSDDEKKP 720
>AF067608-8|AAC17647.1| 432|Caenorhabditis elegans Eukaryotic
initiation factor protein3.E protein.
Length = 432
Score = 31.9 bits (69), Expect = 0.60
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = -2
Query: 613 LAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM-AACDPRHGRYL 437
L M PF LH IP + RG ++LT E+ +Q+ NM+ + + +G+ +
Sbjct: 6 LTQRMAPFLDLHLIIPLLEFIEPRGIYDEKSLT--EMHRQLLTKTNMIDSVIETYNGKPI 63
Query: 436 TVAAVFRGRMSMKEVDE 386
A + + +KE DE
Sbjct: 64 PAAIEAKKKQIIKERDE 80
>Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical
protein C25A1.10b protein.
Length = 696
Score = 31.1 bits (67), Expect = 1.0
Identities = 29/112 (25%), Positives = 43/112 (38%)
Frame = +1
Query: 421 RQRPQSGSDRGADHKPPSCSSRQTSAASTPAPLAHGTADSRVTSEARNPV*KSATVGTAP 600
++ S SD D K P ++ TSA +TP P A S +S+ P K V P
Sbjct: 337 KKAASSSSDSSDDEKKPV--AKPTSAKATPKPAAKKADSSSDSSDDEAPA-KKTPVKPTP 393
Query: 601 CSLLACADLHSTDQGTVDKSSRLTLSPKQDGSSRHKSGLLASACGSRYHTEP 756
++A S+D +K K S K +S+ S +P
Sbjct: 394 VKIVAKKVDSSSDSSDDEKKPTKATPVKVTPKSVTKKAAASSSDSSDDEKKP 445
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -2
Query: 598 VPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHG 446
+PFP+ HF PG P+ S A +P + M + M A P G
Sbjct: 115 MPFPQ-HFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRG 164
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -2
Query: 598 VPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHG 446
+PFP+ HF PG P+ S A +P + M + M A P G
Sbjct: 115 MPFPQ-HFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRG 164
>U40420-1|AAA81430.1| 2214|Caenorhabditis elegans Hypothetical
protein F40F4.6 protein.
Length = 2214
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +3
Query: 480 FASNICCVNSGTVSARYC*LPRDVRGAKPGMKKC 581
+ NI C N GT S +C P G M +C
Sbjct: 864 YCQNIICYNGGTASGDHCVCPPGYAGESCEMARC 897
>Z75529-7|CAE54888.1| 382|Caenorhabditis elegans Hypothetical
protein C44H9.7b protein.
Length = 382
Score = 27.9 bits (59), Expect = 9.7
Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 5/158 (3%)
Frame = -2
Query: 769 CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP- 593
C++ E C T L+H S + C+RFP + + + V +P
Sbjct: 69 CLEQETENATCLTKYSTCTTAVFSLSH-----PSDLVACIRFPSDVLNNFANITVQPIPQ 123
Query: 592 FPRLHFFI---PGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAV 422
P+L F G L + R +T L + NM A +P + A+V
Sbjct: 124 IPKLRFITNNSSGSHELLEHCPNRSRTITTC-LNNFQDEVTNMKKA-NPNSEKSQAFASV 181
Query: 421 FRGRMSMKEVDEQMMNIQN-KNSSYFVEWIPNNVKTAV 311
F G ++ E + +N K ++ NN++ +V
Sbjct: 182 F-GVAKLRARLEMFLRSENGKKCGNGIQDFLNNLEKSV 218
>Z75529-6|CAA99785.1| 269|Caenorhabditis elegans Hypothetical
protein C44H9.7a protein.
Length = 269
Score = 27.9 bits (59), Expect = 9.7
Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 5/158 (3%)
Frame = -2
Query: 769 CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP- 593
C++ E C T L+H S + C+RFP + + + V +P
Sbjct: 69 CLEQETENATCLTKYSTCTTAVFSLSH-----PSDLVACIRFPSDVLNNFANITVQPIPQ 123
Query: 592 FPRLHFFI---PGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAV 422
P+L F G L + R +T L + NM A +P + A+V
Sbjct: 124 IPKLRFITNNSSGSHELLEHCPNRSRTITTC-LNNFQDEVTNMKKA-NPNSEKSQAFASV 181
Query: 421 FRGRMSMKEVDEQMMNIQN-KNSSYFVEWIPNNVKTAV 311
F G ++ E + +N K ++ NN++ +V
Sbjct: 182 F-GVAKLRARLEMFLRSENGKKCGNGIQDFLNNLEKSV 218
>U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical
protein F28B4.3 protein.
Length = 2229
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +3
Query: 480 FASNICCVNSGTVSARYC*LPRDVRGAKPGMKKC 581
+ NI C N GTVS C P G + +C
Sbjct: 867 YCQNIVCYNGGTVSGGQCVCPPGYAGESCEVPRC 900
>U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protein
15, isoform b protein.
Length = 777
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 460 HKPPSCSSRQTSAASTPAPLAHGTADSRVTS-EARNPV*KSATVGTAPCS 606
H PP ++ T A TP A D + TS +ARNP TV T S
Sbjct: 86 HSPPCTTAGNTPAGGTPGYRAPVPPDPQPTSAQARNP---PVTVATTQAS 132
>DQ812088-1|ABG89384.1| 530|Caenorhabditis elegans mammalian
stromal interaction molecule-1 protein.
Length = 530
Score = 27.9 bits (59), Expect = 9.7
Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Frame = +1
Query: 436 SGSDRGADHKPPSCSSRQTSAASTPAPLAHGTADSR---------VTSEARNPV*KSATV 588
SGS A P + +S S P P + TA+ R + SE +P+ + +
Sbjct: 415 SGSISNAHSNPNAVNSNFVKKVSPPIPPSQQTANLRFVPTEQSDSIHSEDTSPIVEDVAI 474
Query: 589 GTAPCSLLACADLHSTDQGTVDKSSRLTLSPKQDG 693
+ LA AD+ S G+ + S + K+ G
Sbjct: 475 SRSLTQDLAEADMQSIVSGSTNGSGSVAALKKRKG 509
>AC024823-2|AAF59596.3| 530|Caenorhabditis elegans Hypothetical
protein Y55B1BM.1a protein.
Length = 530
Score = 27.9 bits (59), Expect = 9.7
Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Frame = +1
Query: 436 SGSDRGADHKPPSCSSRQTSAASTPAPLAHGTADSR---------VTSEARNPV*KSATV 588
SGS A P + +S S P P + TA+ R + SE +P+ + +
Sbjct: 415 SGSISNAHSNPNAVNSNFVKKVSPPIPPSQQTANLRFVPTEQSDSIHSEDTSPIVEDVAI 474
Query: 589 GTAPCSLLACADLHSTDQGTVDKSSRLTLSPKQDG 693
+ LA AD+ S G+ + S + K+ G
Sbjct: 475 SRSLTQDLAEADMQSIVSGSTNGSGSVAALKKRKG 509
>AC024823-1|AAL32257.1| 510|Caenorhabditis elegans Hypothetical
protein Y55B1BM.1b protein.
Length = 510
Score = 27.9 bits (59), Expect = 9.7
Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Frame = +1
Query: 436 SGSDRGADHKPPSCSSRQTSAASTPAPLAHGTADSR---------VTSEARNPV*KSATV 588
SGS A P + +S S P P + TA+ R + SE +P+ + +
Sbjct: 395 SGSISNAHSNPNAVNSNFVKKVSPPIPPSQQTANLRFVPTEQSDSIHSEDTSPIVEDVAI 454
Query: 589 GTAPCSLLACADLHSTDQGTVDKSSRLTLSPKQDG 693
+ LA AD+ S G+ + S + K+ G
Sbjct: 455 SRSLTQDLAEADMQSIVSGSTNGSGSVAALKKRKG 489
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,897,639
Number of Sequences: 27780
Number of extensions: 370411
Number of successful extensions: 1245
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1216
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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