Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte11a01
         (809 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450 pr...    27   0.90 
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   2.8  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    24   4.8  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   6.4  
AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    23   8.4  

>AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450
           protein.
          Length = 507

 Score = 26.6 bits (56), Expect = 0.90
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 365 CFPLDRYNTHKLRSHISLFFTLHSSF 442
           CFP  R   H L  H+  F + H+S+
Sbjct: 33  CFPYTRQKPHLLYGHMEQFQSKHASY 58


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = +3

Query: 120  LAIFIKMFIISL---PKGLKCYHTFVPRTLKAMRDETV 224
            L I ++ F++SL   P    CY T +P T+    + TV
Sbjct: 932  LNIHVRFFMLSLENKPHVFDCYTTVIPHTVLTQYNYTV 969


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 445 TNTHADLSWKVLNHNSTPTTLPFLVWRY 528
           TNT +  S  VLNH++T T +   VW Y
Sbjct: 231 TNTKSS-SDPVLNHDTTNTGIAEKVWLY 257


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 693  GPNHNSTFPASPQSSGSLRTAPRNLRDI 610
            GPNH+S    +  SSGS  T+ +  RD+
Sbjct: 1525 GPNHSSPSNHTDDSSGS--TSAKQYRDL 1550


>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 589 PLEHVLHYISEVSW 630
           P+EHVLH   E+ W
Sbjct: 161 PVEHVLHLEEELYW 174


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 866,601
Number of Sequences: 2352
Number of extensions: 18568
Number of successful extensions: 27
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)