Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10p23
(712 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical ... 67 1e-11
Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical pr... 45 6e-05
AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical ... 44 8e-05
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical p... 43 2e-04
AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical... 42 4e-04
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical... 42 4e-04
AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical ... 42 6e-04
U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical pr... 39 0.003
U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical pr... 38 0.005
U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical pr... 38 0.009
AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical ... 38 0.009
AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical ... 38 0.009
U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical pr... 37 0.012
AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical... 37 0.012
Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical pr... 36 0.022
U41273-2|AAA82454.2| 306|Caenorhabditis elegans Hypothetical pr... 36 0.022
AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical ... 36 0.029
AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical ... 36 0.029
Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical pr... 35 0.050
AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical ... 35 0.066
Z35595-4|CAA84635.1| 170|Caenorhabditis elegans Hypothetical pr... 34 0.087
Z11115-11|CAA77447.1| 161|Caenorhabditis elegans Hypothetical p... 34 0.087
AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical ... 33 0.15
Z70757-5|CAA94801.1| 110|Caenorhabditis elegans Hypothetical pr... 33 0.20
AL132876-38|CAD21663.2| 224|Caenorhabditis elegans Hypothetical... 33 0.20
AB077287-1|BAB83695.1| 101|Caenorhabditis elegans RING-H2 finge... 33 0.20
Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical pr... 32 0.35
AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc... 32 0.35
AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical ... 32 0.35
Z81505-1|CAB04122.1| 673|Caenorhabditis elegans Hypothetical pr... 32 0.47
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 31 0.61
U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical p... 31 0.81
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 31 1.1
AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical ... 31 1.1
Z46787-5|CAA86743.1| 409|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF016442-9|AAB65921.1| 714|Caenorhabditis elegans Hypothetical ... 29 2.5
AC024809-5|AAF59544.3| 287|Caenorhabditis elegans Hypothetical ... 29 2.5
U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical pr... 29 3.3
X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein. 29 4.3
U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of l... 29 4.3
U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of l... 29 4.3
U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of l... 29 4.3
U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein ... 29 4.3
AC024806-4|AAF59525.1| 192|Caenorhabditis elegans Hypothetical ... 29 4.3
Z81029-1|CAB02697.1| 465|Caenorhabditis elegans Hypothetical pr... 28 5.7
U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z46242-13|CAA86328.1| 135|Caenorhabditis elegans Hypothetical p... 28 7.6
AC199170-5|ABO33263.1| 95|Caenorhabditis elegans Hypothetical ... 28 7.6
>AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical
protein Y119C1B.5 protein.
Length = 754
Score = 66.9 bits (156), Expect = 1e-11
Identities = 27/43 (62%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Frame = -3
Query: 704 DDVCAICYXEM-HSAKITRCNHFFHGVCLRKWLYVQDRCPLCH 579
+DVCAIC+ EM A+IT C H+FHG CLRKWL V+ CPLC+
Sbjct: 601 EDVCAICFIEMKEEARITPCKHYFHGPCLRKWLAVKMVCPLCY 643
>Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical
protein W02A11.3 protein.
Length = 489
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = -3
Query: 704 DDVCAIC---YXEMHSAKITRCNHFFHGVCLRKWLYVQDRCPLCHD 576
+D C +C + + S + RCNH FH C+ KWL + RCP+C +
Sbjct: 430 EDTCTVCLSSFEDGESIQKLRCNHVFHPECIYKWLDINKRCPMCRE 475
>Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical
protein F55A11.3 protein.
Length = 610
Score = 44.8 bits (101), Expect = 6e-05
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = -3
Query: 707 LDDVCAICYXEMH---SAKITRCNHFFHGVCLRKWLYVQDRCPLCHDILYK 564
+D C IC EM S K C+H FH CLR W Q CP C +++
Sbjct: 288 MDATCIICREEMTVDASPKRLPCSHVFHAHCLRSWFQRQQTCPTCRTDIWQ 338
>AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical
protein Y47D3B.11 protein.
Length = 487
Score = 44.4 bits (100), Expect = 8e-05
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Frame = -3
Query: 695 CAIC---YXEMHSAKITRCNHFFHGVCLRKWLYVQDRCPLCH-DILYK 564
C IC Y E ++ C H FH C+ WL + RCPLC D++YK
Sbjct: 317 CVICLEEYEEGTELRVLFCGHEFHPKCVDPWLLSKRRCPLCQFDVVYK 364
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = -3
Query: 707 LDDV-CAICYXEMHSAKIT---RCNHFFHGVCLRKWLYVQDRCPLCHDIL 570
LDD CAIC EM++ K T C FH C KWL + CP C ++
Sbjct: 437 LDDTECAICLEEMYNFKETIKCECRRRFHSKCATKWLNEKRECPTCRKLM 486
>Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 42.7 bits (96), Expect = 2e-04
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -3
Query: 710 NLDDVCAICYXEMHSAKITRCNHFFHGVCLRKWLYVQDRCPLC 582
N DD C +C+ + +++ C+H FH CL WL CP C
Sbjct: 330 NGDDRCVVCWELLGTSRRLPCSHQFHDWCLMWWLAQDSSCPTC 372
>Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 42.7 bits (96), Expect = 2e-04
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -3
Query: 710 NLDDVCAICYXEMHSAKITRCNHFFHGVCLRKWLYVQDRCPLC 582
N DD C +C+ + +++ C+H FH CL WL CP C
Sbjct: 330 NGDDRCVVCWELLGTSRRLPCSHQFHDWCLMWWLAQDSSCPTC 372
>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
protein C09E7.8b protein.
Length = 1080
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = -3
Query: 707 LDDV-CAICYXEMHSAKIT---RCNHFFHGVCLRKWLYVQDRCPLCHDIL 570
LDD CAIC EM + K T +C FH C KWL + CP C +L
Sbjct: 1021 LDDTECAICLDEMTNFKETIKCQCRRRFHLECATKWLNEKRECPTCRKLL 1070
>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
protein C09E7.8a protein.
Length = 1114
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = -3
Query: 707 LDDV-CAICYXEMHSAKIT---RCNHFFHGVCLRKWLYVQDRCPLCHDIL 570
LDD CAIC EM + K T +C FH C KWL + CP C +L
Sbjct: 1055 LDDTECAICLDEMTNFKETIKCQCRRRFHLECATKWLNEKRECPTCRKLL 1104
>AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical
protein C09E7.9 protein.
Length = 789
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = -3
Query: 707 LDDV-CAICYXEMHSAKIT---RCNHFFHGVCLRKWLYVQDRCPLCHDIL 570
LDD CAIC EM + K T C FH C KWL + CP C +L
Sbjct: 730 LDDTECAICLDEMTNFKETIKCECRRRFHLKCATKWLNEKRECPTCRKLL 779
>U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical
protein R10A10.2 protein.
Length = 112
Score = 39.1 bits (87), Expect = 0.003
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 650 CNHFFHGVCLRKWLYVQDRCPLC 582
CNH FH C+ +W+ +RCPLC
Sbjct: 79 CNHSFHHCCMTQWIRQNNRCPLC 101
>U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical
protein EEED8.16 protein.
Length = 590
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3
Query: 695 CAICYXEMHSAKIT-RCNHFFHGVCLRKWLYVQDRCPLC 582
CA+C M + + CNH FH CL +W + CP+C
Sbjct: 260 CAVCLERMDDSVLAILCNHSFHARCLEQW--ADNTCPVC 296
>U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical
protein B0432.13 protein.
Length = 451
Score = 37.5 bits (83), Expect = 0.009
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = -3
Query: 710 NLDDVCAICYXEM-HSAKITR--CNHFFHGVCLRKWLYVQDRCPLC 582
+L C+IC+ ++ + KI+ C H +H C+ +W+ + +CP C
Sbjct: 8 SLQGSCSICFEDLKQNDKISAIVCGHIYHHGCISQWIATKRQCPSC 53
>AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical
protein H10E21.5 protein.
Length = 473
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = -3
Query: 707 LDDVCAIC---YXEMHSAKITRCNHFFHGVCLRKWLYVQDRCPLC-HDIL 570
L CA+C Y ++ C H +H C+ WL CP+C +DIL
Sbjct: 223 LQSDCAVCLDPYQLQDVIRLLPCKHIYHKSCIDPWLLEHRTCPMCKNDIL 272
>AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical
protein Y54E10BR.3 protein.
Length = 304
Score = 37.5 bits (83), Expect = 0.009
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 650 CNHFFHGVCLRKWLYVQDRCPLC 582
CNH FH C+ WL ++ CP+C
Sbjct: 256 CNHIFHRPCIEPWLKTKNSCPVC 278
>U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical
protein ZC13.1b protein.
Length = 398
Score = 37.1 bits (82), Expect = 0.012
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -3
Query: 695 CAICYXEMHSAKITRCNHFFHGVCLRKWLYVQDRCPLC 582
CA+C+ ++ C H F C+ WL + CP+C
Sbjct: 337 CAVCHGDLLQPIKLECTHVFCKFCIETWLDQKSTCPIC 374
>AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical
protein Y47G6A.31 protein.
Length = 212
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = -3
Query: 695 CAICYXEM----HSAKITR-CNHFFHGVCLRKWLYVQDRCPLCHD 576
C+IC+ + H K+ C H F CL WL QD CP+C +
Sbjct: 34 CSICFFDFDDFQHLPKLLENCGHTFCYSCLFDWLKSQDTCPMCRE 78
>Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical
protein T02C1.2 protein.
Length = 275
Score = 36.3 bits (80), Expect = 0.022
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 704 DDV-CAICYXEMHSAKITRCNHFFHGVCLRKWLYVQDRCPLCHDILY 567
DDV C ICY + RC H F C+ + L + +CP C +Y
Sbjct: 96 DDVLCTICYDIIVEPHTLRCQHSFCKKCIDQCLPLTRKCPSCQQWVY 142
>U41273-2|AAA82454.2| 306|Caenorhabditis elegans Hypothetical
protein C26B9.6 protein.
Length = 306
Score = 36.3 bits (80), Expect = 0.022
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 701 DVCAICYXEMH-SAKITRCNHFFHGVCLRKWLYVQDRCPLC 582
D+C ICY ++ +I C H F VCL+ + + CP+C
Sbjct: 105 DICYICYYKLTIPTRIENCGHEFCYVCLKSNFAMGNDCPVC 145
>AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical
protein C18B12.4 protein.
Length = 456
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Frame = -3
Query: 701 DVCAICYXEMHSAKITR---CNHFFHGVCLRKWL-YVQDRCPLC 582
D CAIC S + R C H FH C+ WL + CPLC
Sbjct: 245 DTCAICLESFASGEKLRHLPCRHVFHCNCIDVWLTQTRKICPLC 288
>AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical
protein T22B2.1 protein.
Length = 955
Score = 35.9 bits (79), Expect = 0.029
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = -3
Query: 704 DDVCAICYXEM----HSAKITRCNHFFHGVCLRKWLYVQDRCPLCH 579
D C +C +M + K + C +H C++KW ++ CP C+
Sbjct: 897 DKECLVCLEDMVKNQDTVKCSTCKRQYHTTCVQKWFKIKRICPTCN 942
>Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical
protein T02C1.1 protein.
Length = 160
Score = 35.1 bits (77), Expect = 0.050
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 704 DDVCAICYXEMHSAKITRCNHFFHGVCLRKWLYVQDRCPLC 582
D CA+C I C H + C+ L + ++CPLC
Sbjct: 5 DFCCAVCLDFFVEPCIIECGHSYCRFCIESHLNINEKCPLC 45
>AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical
protein Y73C8C.8 protein.
Length = 946
Score = 34.7 bits (76), Expect = 0.066
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = -3
Query: 704 DDVCAICYXEM----HSAKITRCNHFFHGVCLRKWLYVQDRCPLCH 579
D C +C +M + K + C +H C +KW V+ CP C+
Sbjct: 888 DKECLVCLEDMMEEHETLKCSNCKRQYHTGCAQKWFKVKRICPTCN 933
>Z35595-4|CAA84635.1| 170|Caenorhabditis elegans Hypothetical
protein C01G6.4 protein.
Length = 170
Score = 34.3 bits (75), Expect = 0.087
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = -3
Query: 695 CAICYXEMHSAKITR---CNHFFHGVCLRKWLYVQDRCPLC 582
CAIC + + R C H FH C+ +WL CP C
Sbjct: 95 CAICMIDFEPGERIRFLPCMHSFHQECVDEWLMKSFTCPSC 135
>Z11115-11|CAA77447.1| 161|Caenorhabditis elegans Hypothetical
protein ZK637.14 protein.
Length = 161
Score = 34.3 bits (75), Expect = 0.087
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 650 CNHFFHGVCLRKWLYVQDRCPLC 582
C H FH CL WL Q CP C
Sbjct: 111 CKHRFHYFCLTLWLEAQQTCPTC 133
>AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical
protein Y73C8C.7 protein.
Length = 574
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = -3
Query: 704 DDVCAICYXEM----HSAKITRCNHFFHGVCLRKWLYVQDRCPLC 582
D+ C +C +M + K C +H C +KW V+ CP C
Sbjct: 516 DNECLVCLEDMKEEHETLKCLDCKRKYHTGCAQKWFKVKRICPTC 560
>Z70757-5|CAA94801.1| 110|Caenorhabditis elegans Hypothetical
protein ZK287.5 protein.
Length = 110
Score = 33.1 bits (72), Expect = 0.20
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 650 CNHFFHGVCLRKWLYVQDRCPL 585
CNH FH C+ +WL + CPL
Sbjct: 77 CNHAFHFHCISRWLKTRQVCPL 98
>AL132876-38|CAD21663.2| 224|Caenorhabditis elegans Hypothetical
protein Y105E8A.14 protein.
Length = 224
Score = 33.1 bits (72), Expect = 0.20
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -3
Query: 707 LDDVCAICYXEM-HSAKITRCNHFFHGVCLRKWLYVQDR--CPLC 582
+D CA+CY EM I C H F +CL K + V + CP+C
Sbjct: 20 IDKECAVCYSEMILPTTIPSCGHKFCFICL-KGVSVSNNGDCPIC 63
>AB077287-1|BAB83695.1| 101|Caenorhabditis elegans RING-H2 finger
protein Rbx1 protein.
Length = 101
Score = 33.1 bits (72), Expect = 0.20
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 650 CNHFFHGVCLRKWLYVQDRCPL 585
CNH FH C+ +WL + CPL
Sbjct: 68 CNHAFHFHCISRWLKTRQVCPL 89
>Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical
protein C16C10.7 protein.
Length = 235
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = -3
Query: 695 CAICYXEMHSAKITRCNHFFHGVCLRKWLYVQDR---CPLC 582
C IC A ++ C H F CL +WL + CP+C
Sbjct: 26 CNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPNNQVCPVC 66
>Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical
protein K01G5.1 protein.
Length = 384
Score = 32.3 bits (70), Expect = 0.35
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -3
Query: 695 CAICYXEMHSAKITRCNHFFHGVCLRKWLYVQDRCPLC 582
C IC +T+C H+F C K +CP+C
Sbjct: 241 CFICGNPFVDPIVTKCKHYFCTGCALKSFQKSSKCPIC 278
>AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc
finger protein protein.
Length = 384
Score = 32.3 bits (70), Expect = 0.35
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -3
Query: 695 CAICYXEMHSAKITRCNHFFHGVCLRKWLYVQDRCPLC 582
C IC +T+C H+F C K +CP+C
Sbjct: 241 CFICGNPFVDPIVTKCKHYFCTGCALKSFQKSSKCPIC 278
>AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical
protein Y54E10A.11 protein.
Length = 1446
Score = 32.3 bits (70), Expect = 0.35
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 9/49 (18%)
Frame = -3
Query: 695 CAICYXEMHSA-------KITRCNHFFHGVCLRKWLYV--QDRCPLCHD 576
C IC +H K +C + FH CL KW Q CPLC +
Sbjct: 1395 CTICMMTVHQQTHQLPKIKCKQCKNKFHSNCLYKWFESSNQSTCPLCRN 1443
>Z81505-1|CAB04122.1| 673|Caenorhabditis elegans Hypothetical
protein F16A11.1 protein.
Length = 673
Score = 31.9 bits (69), Expect = 0.47
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -3
Query: 704 DDVCAICYXEMHSAKITRCNHFFHGVCLRKWLYVQDRCPLC 582
+D C IC+ S + CNH G C + D CPLC
Sbjct: 561 EDYCTICFAAPGSTTLLPCNH--DGFC-SDCCNMMDHCPLC 598
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = -3
Query: 704 DDVCAICYXE-MHSAKITR--CNHFFHGVCLR 618
DDVC IC+ E + +A R C H FH C+R
Sbjct: 3514 DDVCVICFTERLGAAPCIRLGCGHMFHFHCVR 3545
>U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical
protein C32D5.11 protein.
Length = 770
Score = 31.1 bits (67), Expect = 0.81
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = -3
Query: 695 CAICYXEMHS--AKITRCNHFFHGVCLRKWL--YVQDRCPLCHDILYKI 561
C IC S +I CNH F C+ +W+ ++ CP+C + K+
Sbjct: 68 CTICLSTRFSQECRIEGCNHSFCFSCISEWVCQSLRPSCPMCRKDVDKV 116
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Frame = -3
Query: 704 DDVCAICYXEMHSAKIT----RCNHFFHGVCLRKWLYVQDRCPLC 582
+D C IC + A T C +H C+ +WL + CP C
Sbjct: 2104 EDGCLICTEIIEEAVETVTCDTCTREYHYHCISRWLKINSVCPQC 2148
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Frame = -3
Query: 704 DDVCAICYXEMHSAKIT----RCNHFFHGVCLRKWLYVQDRCPLC 582
+D C IC + A T C +H C+ +WL + CP C
Sbjct: 2104 EDGCLICTEIIEEAVETVTCDTCTREYHYHCISRWLKINSVCPQC 2148
>AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical
protein Y105C5B.11 protein.
Length = 583
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
Frame = -3
Query: 695 CAICYXEMH----SAKITRCNHFFHGVCLRKWLYVQDRCPLC 582
C IC ++ + + RC +H C +WL + CP C
Sbjct: 528 CIICREDIDLENGTVQCPRCTEIYHSHCATQWLSQKPTCPKC 569
>Z46787-5|CAA86743.1| 409|Caenorhabditis elegans Hypothetical
protein C16C10.5 protein.
Length = 409
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = -3
Query: 650 CNHFFHGVCLRKWLYV--QDRCPLCHD 576
C H FH C+R W+ V CP C +
Sbjct: 333 CGHVFHEFCIRGWVVVGKLQTCPYCKE 359
>AF016442-9|AAB65921.1| 714|Caenorhabditis elegans Hypothetical
protein K12B6.8 protein.
Length = 714
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 5/46 (10%)
Frame = -3
Query: 704 DDVCAICYXEM-----HSAKITRCNHFFHGVCLRKWLYVQDRCPLC 582
D +CAIC+ E+ + K RC H C L CP C
Sbjct: 652 DAICAICHDEIMTNDKSAIKCERCTKSIHEKCAAPLLQQSVMCPTC 697
>AC024809-5|AAF59544.3| 287|Caenorhabditis elegans Hypothetical
protein Y53G8AR.5 protein.
Length = 287
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -3
Query: 710 NLDDVCAICYXEMHSAKI--TRCNHFFHGVCLRKWL 609
N+D C+IC + S+ I T C+HF H C ++L
Sbjct: 116 NMD--CSICLICLASSPIIVTACDHFMHFACFNRYL 149
>U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical
protein R02E12.4 protein.
Length = 639
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = -3
Query: 704 DDVCAICYXEMHS-AKITRCNHFFHGVCLRKWLYVQDRCPLC 582
D C IC+ H C H C +WL CP+C
Sbjct: 23 DVQCHICFQVNHEPVTFLTCKHSICAGCAGRWLSSCSVCPMC 64
>X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein.
Length = 582
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Frame = -3
Query: 701 DVCAICYXEMHSAKITRCNHFFHGVCLRKWLYVQ---DRCPLC 582
++C IC + KI C H CL W + CP C
Sbjct: 388 ELCKICDDNEKNIKIEPCGHLLCAKCLANWQDSDGGGNTCPFC 430
>U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform a protein.
Length = 582
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Frame = -3
Query: 701 DVCAICYXEMHSAKITRCNHFFHGVCLRKWLYVQ---DRCPLC 582
++C IC + KI C H CL W + CP C
Sbjct: 388 ELCKICDDNEKNIKIEPCGHLLCAKCLANWQDSDGGGNTCPFC 430
>U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform b protein.
Length = 565
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Frame = -3
Query: 701 DVCAICYXEMHSAKITRCNHFFHGVCLRKWLYVQ---DRCPLC 582
++C IC + KI C H CL W + CP C
Sbjct: 371 ELCKICDDNEKNIKIEPCGHLLCAKCLANWQDSDGGGNTCPFC 413
>U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform c protein.
Length = 523
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Frame = -3
Query: 701 DVCAICYXEMHSAKITRCNHFFHGVCLRKWLYVQ---DRCPLC 582
++C IC + KI C H CL W + CP C
Sbjct: 371 ELCKICDDNEKNIKIEPCGHLLCAKCLANWQDSDGGGNTCPFC 413
>U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein 1
protein.
Length = 596
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = -3
Query: 668 SAKITRCNHFFHGVCLRKWLY--VQDRCPLC 582
S + RC+H FH CL +L CP C
Sbjct: 387 SLQALRCSHIFHEKCLHTYLLQRTDQTCPKC 417
>AC024806-4|AAF59525.1| 192|Caenorhabditis elegans Hypothetical
protein Y52E8A.2 protein.
Length = 192
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Frame = -3
Query: 704 DDVCAICYXEMHSA----KITRCNHFFHGVCLRKWLYVQDRCPLCH 579
D C IC ++ S K C FH C +W + CP C+
Sbjct: 135 DARCLICLDDVISTEKTIKCNSCRRRFHLDCASQWFKEKSVCPACN 180
>Z81029-1|CAB02697.1| 465|Caenorhabditis elegans Hypothetical
protein C01A2.1 protein.
Length = 465
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -3
Query: 695 CAICYXEMHSAKITRCNHFFHGVCLRKWLYVQDRCPLC 582
C C+ HS RC H +K LY +RC LC
Sbjct: 391 CVYCHYHHHS---NRCGHTKGSFERKKILYKDNRCHLC 425
>U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical
protein F57C12.2 protein.
Length = 556
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 704 DDVCAICYXEMHSAKITRCNHFFH 633
D CAIC EM K T C FH
Sbjct: 232 DTECAICKEEMRFPKCTTCRKKFH 255
>Z46242-13|CAA86328.1| 135|Caenorhabditis elegans Hypothetical
protein F35G12.9 protein.
Length = 135
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 5/28 (17%)
Frame = -3
Query: 650 CNHFFHGVCLRKWLYV-----QDRCPLC 582
C H FH C+ KW+ + +CPLC
Sbjct: 100 CRHAFHRHCIDKWIAAPTNQPRAQCPLC 127
>AC199170-5|ABO33263.1| 95|Caenorhabditis elegans Hypothetical
protein T08D2.4 protein.
Length = 95
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Frame = -3
Query: 710 NLDDVCAICYXEM----HSAKITRCNHFFHGVCLRKWL 609
N+ C+IC E H K+ C H F +C+ K L
Sbjct: 21 NMKPTCSICMEEFDANSHIPKVLICGHSFCIICIEKHL 58
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,861,300
Number of Sequences: 27780
Number of extensions: 267452
Number of successful extensions: 793
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -