Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10p23
(712 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 27 0.23
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 27 0.23
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 26 0.40
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 25 0.53
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 24 1.6
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 24 1.6
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 24 1.6
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 24 1.6
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 24 1.6
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 24 1.6
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 24 1.6
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 24 1.6
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 24 1.6
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 24 1.6
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 2.9
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 2.9
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 2.9
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 2.9
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 2.9
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 2.9
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 2.9
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 2.9
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 23 2.9
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 23 3.8
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 6.6
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 21 8.7
AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin prot... 21 8.7
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 21 8.7
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 26.6 bits (56), Expect = 0.23
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +3
Query: 279 KNRKSQVCRFDNYNIKTNNLLYKSKGLYH 365
+++++++ +NYN K N Y SK LY+
Sbjct: 297 RSKETKIISSNNYNYKNYNNNYNSKKLYY 325
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 26.6 bits (56), Expect = 0.23
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +3
Query: 279 KNRKSQVCRFDNYNIKTNNLLYKSKGLYH 365
+++++++ +NYN K N Y SK LY+
Sbjct: 308 RSKETKIISSNNYNYKNYNNNYNSKKLYY 336
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 25.8 bits (54), Expect = 0.40
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 237 LNEISFITKHNNNIKNRKSQVCRFDNYNIKTNNLLYKSKGLYH 365
++ +S T HNNN N + ++NYN NN K LY+
Sbjct: 315 ISSLSNKTIHNNNNYNNNNYNNNYNNYN---NNNYNNYKKLYY 354
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 25.4 bits (53), Expect = 0.53
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 198 TPKATRPFERSNALNEISFITKH 266
TP+ PFE AL+ + FI H
Sbjct: 442 TPRKKYPFELEKALHNVMFIQHH 464
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 255 ITKHNNNIKNRKSQVCRFDNYNIKTNNLLY 344
I +NN++ N + ++NYN N LY
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLY 110
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 255 ITKHNNNIKNRKSQVCRFDNYNIKTNNLLY 344
I +NN++ N + ++NYN N LY
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLY 110
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 255 ITKHNNNIKNRKSQVCRFDNYNIKTNNLLY 344
I +NN++ N + ++NYN N LY
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLY 110
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 255 ITKHNNNIKNRKSQVCRFDNYNIKTNNLLY 344
I +NN++ N + ++NYN N LY
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLY 110
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 255 ITKHNNNIKNRKSQVCRFDNYNIKTNNLLY 344
I +NN++ N + ++NYN N LY
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLY 110
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 255 ITKHNNNIKNRKSQVCRFDNYNIKTNNLLY 344
I +NN++ N + ++NYN N LY
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLY 110
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 255 ITKHNNNIKNRKSQVCRFDNYNIKTNNLLY 344
I +NN++ N + ++NYN N LY
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLY 110
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 255 ITKHNNNIKNRKSQVCRFDNYNIKTNNLLY 344
I +NN++ N + ++NYN N LY
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLY 110
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 255 ITKHNNNIKNRKSQVCRFDNYNIKTNNLLY 344
I +NN++ N + ++NYN N LY
Sbjct: 314 IISNNNSLSNNYNYNNNYNNYNKHNYNKLY 343
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 255 ITKHNNNIKNRKSQVCRFDNYNIKTNNLLY 344
I +NN++ N + ++NYN N LY
Sbjct: 314 IISNNNSLSNNYNYNNNYNNYNKHNYNKLY 343
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 340 YTNRKDYTTHTNKSLYKLLYF 402
Y+N +Y + N + YK LY+
Sbjct: 91 YSNYNNYNNNNNYNNYKKLYY 111
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 340 YTNRKDYTTHTNKSLYKLLYF 402
Y+N +Y + N + YK LY+
Sbjct: 91 YSNYNNYNNNNNYNNYKKLYY 111
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 340 YTNRKDYTTHTNKSLYKLLYF 402
Y+N +Y + N + YK LY+
Sbjct: 91 YSNYNNYNNNNNYNNYKKLYY 111
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 340 YTNRKDYTTHTNKSLYKLLYF 402
Y+N +Y + N + YK LY+
Sbjct: 91 YSNYNNYNNNNNYNNYKKLYY 111
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 340 YTNRKDYTTHTNKSLYKLLYF 402
Y+N +Y + N + YK LY+
Sbjct: 91 YSNYNNYNNNNNYNNYKKLYY 111
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 340 YTNRKDYTTHTNKSLYKLLYF 402
Y+N +Y + N + YK LY+
Sbjct: 91 YSNYNNYNNNNNYNNYKKLYY 111
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 340 YTNRKDYTTHTNKSLYKLLYF 402
Y+N +Y + N + YK LY+
Sbjct: 91 YSNYNNYNNNNNYNNYKKLYY 111
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 340 YTNRKDYTTHTNKSLYKLLYF 402
Y+N +Y + N + YK LY+
Sbjct: 91 YSNYNNYNNNNNYNNYKKLYY 111
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 23.0 bits (47), Expect = 2.9
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = -2
Query: 144 NAINIYKNKYKCFKTLKRKNTDFLQN 67
N+ ++K + +T+ RKN+D+L N
Sbjct: 154 NSDVLFKQNKEEEQTINRKNSDYLDN 179
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.8
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 255 ITKHNNNIKNRKSQVCRFDNYNIKTNNLLY 344
I +NN + N + ++NYN N LY
Sbjct: 81 IISNNNPLSNNYNYNNNYNNYNKHNYNKLY 110
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 6.6
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +3
Query: 255 ITKHNNNIKNRKSQVCRFDNYNIKTNNLLYKSKGLYH 365
I +NN++ N + ++NYN N YK Y+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYN-NNYNTNYKKLQYYN 116
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 21.4 bits (43), Expect = 8.7
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -2
Query: 216 DVWLSEFPKMYK*KITSFQIYQEL 145
DV+L ++P+ Y ++ S YQ +
Sbjct: 144 DVYLIDYPEDYGKRVLSMDGYQNI 167
>AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin
protein.
Length = 215
Score = 21.4 bits (43), Expect = 8.7
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -2
Query: 216 DVWLSEFPKMYK*KITSFQIYQEL 145
DV+L ++P+ Y ++ S YQ +
Sbjct: 144 DVYLIDYPEDYGKRVLSMDGYQNI 167
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 21.4 bits (43), Expect = 8.7
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -2
Query: 216 DVWLSEFPKMYK*KITSFQIYQEL 145
DV+L ++P+ Y ++ S YQ +
Sbjct: 144 DVYLIDYPEDYGKRVLSMDGYQNI 167
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,514
Number of Sequences: 438
Number of extensions: 4105
Number of successful extensions: 29
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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