Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10p20
(745 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y08968-1|CAA70165.1| 111|Drosophila melanogaster Tctex protein ... 176 2e-44
AY069608-1|AAL39753.1| 111|Drosophila melanogaster LD36705p pro... 176 2e-44
AF123058-1|AAD30033.1| 111|Drosophila melanogaster dynein light... 176 2e-44
AE014297-2495|AAF55532.1| 111|Drosophila melanogaster CG12363-P... 176 2e-44
AY113461-1|AAM29466.1| 173|Drosophila melanogaster RE37471p pro... 51 2e-06
AJ863565-1|CAI10732.1| 173|Drosophila melanogaster dynein light... 51 2e-06
AE014297-1064|AAF54474.1| 173|Drosophila melanogaster CG5359-PA... 51 2e-06
BT024239-1|ABC86301.1| 179|Drosophila melanogaster IP16258p pro... 41 0.002
AE014296-2507|AAF49639.1| 142|Drosophila melanogaster CG7276-PA... 41 0.002
AE014296-2506|AAS64993.1| 171|Drosophila melanogaster CG7276-PB... 41 0.002
BT025003-1|ABE01233.1| 97|Drosophila melanogaster IP05158p pro... 40 0.003
Y00274-1|CAA68377.1| 758|Drosophila melanogaster finger protein... 30 3.8
U17742-1|AAB60232.1| 758|Drosophila melanogaster zinc finger DN... 30 3.8
BT024234-1|ABC86296.1| 758|Drosophila melanogaster LD14196p pro... 30 3.8
AE014297-790|AAF54270.1| 758|Drosophila melanogaster CG9786-PB,... 30 3.8
AE014297-789|AAN13395.1| 758|Drosophila melanogaster CG9786-PA,... 30 3.8
>Y08968-1|CAA70165.1| 111|Drosophila melanogaster Tctex protein
protein.
Length = 111
Score = 176 bits (429), Expect = 2e-44
Identities = 78/99 (78%), Positives = 86/99 (86%)
Frame = -3
Query: 437 NQFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQLTKLQKPYKYVVTCTI 258
+QFIVDDVSK IKEAIE +IGG AYQH+ VN WT VVE+CL LTK QKPYKY+VT I
Sbjct: 8 SQFIVDDVSKTIKEAIETTIGGNAYQHDKVNNWTGQVVENCLTVLTKEQKPYKYIVTAMI 67
Query: 257 LQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 141
+QKNGAGLHT+SSCYW+N TDGSCTVRWENKTMYCIVSV
Sbjct: 68 MQKNGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSV 106
>AY069608-1|AAL39753.1| 111|Drosophila melanogaster LD36705p
protein.
Length = 111
Score = 176 bits (429), Expect = 2e-44
Identities = 78/99 (78%), Positives = 86/99 (86%)
Frame = -3
Query: 437 NQFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQLTKLQKPYKYVVTCTI 258
+QFIVDDVSK IKEAIE +IGG AYQH+ VN WT VVE+CL LTK QKPYKY+VT I
Sbjct: 8 SQFIVDDVSKTIKEAIETTIGGNAYQHDKVNNWTGQVVENCLTVLTKEQKPYKYIVTAMI 67
Query: 257 LQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 141
+QKNGAGLHT+SSCYW+N TDGSCTVRWENKTMYCIVSV
Sbjct: 68 MQKNGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSV 106
>AF123058-1|AAD30033.1| 111|Drosophila melanogaster dynein light
chain subunit protein.
Length = 111
Score = 176 bits (429), Expect = 2e-44
Identities = 78/99 (78%), Positives = 86/99 (86%)
Frame = -3
Query: 437 NQFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQLTKLQKPYKYVVTCTI 258
+QFIVDDVSK IKEAIE +IGG AYQH+ VN WT VVE+CL LTK QKPYKY+VT I
Sbjct: 8 SQFIVDDVSKTIKEAIETTIGGNAYQHDKVNNWTGQVVENCLTVLTKEQKPYKYIVTAMI 67
Query: 257 LQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 141
+QKNGAGLHT+SSCYW+N TDGSCTVRWENKTMYCIVSV
Sbjct: 68 MQKNGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSV 106
>AE014297-2495|AAF55532.1| 111|Drosophila melanogaster CG12363-PA
protein.
Length = 111
Score = 176 bits (429), Expect = 2e-44
Identities = 78/99 (78%), Positives = 86/99 (86%)
Frame = -3
Query: 437 NQFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQLTKLQKPYKYVVTCTI 258
+QFIVDDVSK IKEAIE +IGG AYQH+ VN WT VVE+CL LTK QKPYKY+VT I
Sbjct: 8 SQFIVDDVSKTIKEAIETTIGGNAYQHDKVNNWTGQVVENCLTVLTKEQKPYKYIVTAMI 67
Query: 257 LQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 141
+QKNGAGLHT+SSCYW+N TDGSCTVRWENKTMYCIVSV
Sbjct: 68 MQKNGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSV 106
>AY113461-1|AAM29466.1| 173|Drosophila melanogaster RE37471p
protein.
Length = 173
Score = 50.8 bits (116), Expect = 2e-06
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Frame = -3
Query: 431 FIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQL--TKLQKPYKYVVTCTI 258
F + + I+ + + Y + +WTS + + Q+ + L K YK+VV +
Sbjct: 69 FPLPTIKSIMNNVMAEKLKDKTYDKDVAKKWTSEIADEVNQQIASSSLVKRYKHVVQVML 128
Query: 257 LQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 141
Q+ GAG +S C WD D S + + N +++C+ +V
Sbjct: 129 GQELGAGATYNSRCCWDCDCDTSVSEVFSNTSLFCVCTV 167
>AJ863565-1|CAI10732.1| 173|Drosophila melanogaster dynein light
chain protein.
Length = 173
Score = 50.8 bits (116), Expect = 2e-06
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Frame = -3
Query: 431 FIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQL--TKLQKPYKYVVTCTI 258
F + + I+ + + Y + +WTS + + Q+ + L K YK+VV +
Sbjct: 69 FPLPTIKSIMNNVMAEKLKDKTYDKDVAKKWTSEIADEVNQQIASSSLVKRYKHVVQVML 128
Query: 257 LQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 141
Q+ GAG +S C WD D S + + N +++C+ +V
Sbjct: 129 GQELGAGATYNSRCCWDCDCDTSVSEVFSNTSLFCVCTV 167
>AE014297-1064|AAF54474.1| 173|Drosophila melanogaster CG5359-PA
protein.
Length = 173
Score = 50.8 bits (116), Expect = 2e-06
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Frame = -3
Query: 431 FIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESCLGQL--TKLQKPYKYVVTCTI 258
F + + I+ + + Y + +WTS + + Q+ + L K YK+VV +
Sbjct: 69 FPLPTIKSIMNNVMAEKLKDKTYDKDVAKKWTSEIADEVNQQIASSSLVKRYKHVVQVML 128
Query: 257 LQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 141
Q+ GAG +S C WD D S + + N +++C+ +V
Sbjct: 129 GQELGAGATYNSRCCWDCDCDTSVSEVFSNTSLFCVCTV 167
>BT024239-1|ABC86301.1| 179|Drosophila melanogaster IP16258p
protein.
Length = 179
Score = 40.7 bits (91), Expect = 0.002
Identities = 21/100 (21%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = -3
Query: 434 QFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESC-LGQLTKLQKP-YKYVVTCT 261
+F + + +I + ++ + Y + +WT V + + + P +K+VV
Sbjct: 74 KFPLPYIRLMIAQVVKEKLANKTYNQSEALKWTREVADDINIKMKGRGSSPRFKHVVNVM 133
Query: 260 ILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 141
+ Q+ GAG + WD +D T ++ + CI +V
Sbjct: 134 LYQQTGAGCFYGARAIWDELSDDYITFTFDGGSFICIAAV 173
>AE014296-2507|AAF49639.1| 142|Drosophila melanogaster CG7276-PA,
isoform A protein.
Length = 142
Score = 40.7 bits (91), Expect = 0.002
Identities = 21/100 (21%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = -3
Query: 434 QFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESC-LGQLTKLQKP-YKYVVTCT 261
+F + + +I + ++ + Y + +WT V + + + P +K+VV
Sbjct: 37 KFPLPYIRLMIAQVVKEKLANKTYNQSEALKWTREVADDINIKMKGRGSSPRFKHVVNVM 96
Query: 260 ILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 141
+ Q+ GAG + WD +D T ++ + CI +V
Sbjct: 97 LYQQTGAGCFYGARAIWDELSDDYITFTFDGGSFICIAAV 136
>AE014296-2506|AAS64993.1| 171|Drosophila melanogaster CG7276-PB,
isoform B protein.
Length = 171
Score = 40.7 bits (91), Expect = 0.002
Identities = 21/100 (21%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = -3
Query: 434 QFIVDDVSKIIKEAIENSIGGTAYQHNNVNQWTSAVVESC-LGQLTKLQKP-YKYVVTCT 261
+F + + +I + ++ + Y + +WT V + + + P +K+VV
Sbjct: 66 KFPLPYIRLMIAQVVKEKLANKTYNQSEALKWTREVADDINIKMKGRGSSPRFKHVVNVM 125
Query: 260 ILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 141
+ Q+ GAG + WD +D T ++ + CI +V
Sbjct: 126 LYQQTGAGCFYGARAIWDELSDDYITFTFDGGSFICIAAV 165
>BT025003-1|ABE01233.1| 97|Drosophila melanogaster IP05158p
protein.
Length = 97
Score = 40.3 bits (90), Expect = 0.003
Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = -3
Query: 407 IIKEAIENSIGGTAYQHNNVNQWTSAVVESC-LGQLTKLQKP-YKYVVTCTILQKNGAGL 234
+I + ++ + Y + +WT V + + + P +K+VV + Q+ GAG
Sbjct: 1 MIAQVVKEKLANKTYNQSEALKWTREVADDINIKMKGRGSSPRFKHVVNVMLYQQTGAGC 60
Query: 233 HTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 141
+ WD +D T ++ + CI +V
Sbjct: 61 FYGARAIWDELSDDYITFTFDGGSFICIAAV 91
>Y00274-1|CAA68377.1| 758|Drosophila melanogaster finger protein
protein.
Length = 758
Score = 29.9 bits (64), Expect = 3.8
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1
Query: 520 SAQMWENETKPLDVTSRDPPKSPLKKSQTN 431
S++ + T P+DVT PPKSP K SQ+N
Sbjct: 170 SSEKLQALTPPMDVT---PPKSPAKSSQSN 196
>U17742-1|AAB60232.1| 758|Drosophila melanogaster zinc finger
DNA-binding protein protein.
Length = 758
Score = 29.9 bits (64), Expect = 3.8
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1
Query: 520 SAQMWENETKPLDVTSRDPPKSPLKKSQTN 431
S++ + T P+DVT PPKSP K SQ+N
Sbjct: 170 SSEKLQALTPPMDVT---PPKSPAKSSQSN 196
>BT024234-1|ABC86296.1| 758|Drosophila melanogaster LD14196p
protein.
Length = 758
Score = 29.9 bits (64), Expect = 3.8
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1
Query: 520 SAQMWENETKPLDVTSRDPPKSPLKKSQTN 431
S++ + T P+DVT PPKSP K SQ+N
Sbjct: 170 SSEKLQALTPPMDVT---PPKSPAKSSQSN 196
>AE014297-790|AAF54270.1| 758|Drosophila melanogaster CG9786-PB,
isoform B protein.
Length = 758
Score = 29.9 bits (64), Expect = 3.8
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1
Query: 520 SAQMWENETKPLDVTSRDPPKSPLKKSQTN 431
S++ + T P+DVT PPKSP K SQ+N
Sbjct: 170 SSEKLQALTPPMDVT---PPKSPAKSSQSN 196
>AE014297-789|AAN13395.1| 758|Drosophila melanogaster CG9786-PA,
isoform A protein.
Length = 758
Score = 29.9 bits (64), Expect = 3.8
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1
Query: 520 SAQMWENETKPLDVTSRDPPKSPLKKSQTN 431
S++ + T P+DVT PPKSP K SQ+N
Sbjct: 170 SSEKLQALTPPMDVT---PPKSPAKSSQSN 196
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,143,069
Number of Sequences: 53049
Number of extensions: 741577
Number of successful extensions: 1699
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1699
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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