Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10p15
         (761 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051837-1|AAK93261.1|  383|Drosophila melanogaster LD34157p pro...    44   3e-04
AE014297-3346|AAF56152.1|  383|Drosophila melanogaster CG10184-P...    44   3e-04

>AY051837-1|AAK93261.1|  383|Drosophila melanogaster LD34157p
           protein.
          Length = 383

 Score = 43.6 bits (98), Expect = 3e-04
 Identities = 23/65 (35%), Positives = 35/65 (53%)
 Frame = -3

Query: 738 LTADQLVQRLAQVCLAETQGDCKTPNDEGVIVKATEFNSKTIRFTLHREITDEDLWLAIM 559
           LTA +   RL+ V   E +   K  N  G++VKA+  +    R  L+ ++ DE + LAI 
Sbjct: 308 LTASEFSTRLSIVDAGEVEAGVKDKNGAGIVVKASARDWAFARLVLYHQVDDEQVDLAIR 367

Query: 558 KITYV 544
           K+ YV
Sbjct: 368 KLKYV 372


>AE014297-3346|AAF56152.1|  383|Drosophila melanogaster CG10184-PA
           protein.
          Length = 383

 Score = 43.6 bits (98), Expect = 3e-04
 Identities = 23/65 (35%), Positives = 35/65 (53%)
 Frame = -3

Query: 738 LTADQLVQRLAQVCLAETQGDCKTPNDEGVIVKATEFNSKTIRFTLHREITDEDLWLAIM 559
           LTA +   RL+ V   E +   K  N  G++VKA+  +    R  L+ ++ DE + LAI 
Sbjct: 308 LTASEFSTRLSIVDAGEVEAGVKDKNGAGIVVKASARDWAFARLVLYHQVDDEQVDLAIR 367

Query: 558 KITYV 544
           K+ YV
Sbjct: 368 KLKYV 372


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,662,485
Number of Sequences: 53049
Number of extensions: 537840
Number of successful extensions: 1230
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1230
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)