Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10p15
(761 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 27 0.19
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 27 0.25
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 26 0.33
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 26 0.33
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 26 0.33
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 26 0.33
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 25 0.77
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 25 0.77
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 25 0.77
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 24 1.8
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 24 1.8
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 24 1.8
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 24 1.8
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 24 1.8
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 2.3
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 23 3.1
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 4.1
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 7.1
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 9.4
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 9.4
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 21 9.4
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 9.4
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 9.4
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 21 9.4
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 27.1 bits (57), Expect = 0.19
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 10 NNTTFINMLNNVCRLTYNNYN*KFYQHIEHINTINLTI 123
NN + N NN YNNY K Y +I +I I + +
Sbjct: 330 NNNNYNNNYNNYNNNNYNNYK-KLYYNIINIEQIPVPV 366
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 26.6 bits (56), Expect = 0.25
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 10 NNTTFINMLNNVCRLTYNNYN*KFYQHIEHINTINLTI 123
NN + N NN YNNYN K Y +I +I I + +
Sbjct: 87 NNYNYSNY-NNYNN-NYNNYNKKLYYNINYIEQIPVPV 122
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.2 bits (55), Expect = 0.33
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +1
Query: 37 NNVCRLTYNN--YN*KFYQHIEHINTINLTIKMSF*NTL 147
NN + YNN YN K Y +I +I I + + + + N L
Sbjct: 92 NNNYKYNYNNNNYNKKLYYNINYIEQIPIPVPVYYGNFL 130
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.2 bits (55), Expect = 0.33
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +1
Query: 37 NNVCRLTYNN--YN*KFYQHIEHINTINLTIKMSF*NTL 147
NN + YNN YN K Y +I +I I + + + + N L
Sbjct: 92 NNNYKYNYNNNNYNKKLYYNINYIEQIPIPVPVYYGNFL 130
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.2 bits (55), Expect = 0.33
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +1
Query: 37 NNVCRLTYNN--YN*KFYQHIEHINTINLTIKMSF*NTL 147
NN + YNN YN K Y +I +I I + + + + N L
Sbjct: 92 NNNYKYNYNNNNYNKKLYYNINYIEQIPIPVPVYYGNFL 130
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.2 bits (55), Expect = 0.33
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +1
Query: 37 NNVCRLTYNN--YN*KFYQHIEHINTINLTIKMSF*NTL 147
NN + YNN YN K Y +I +I I + + + + N L
Sbjct: 92 NNNYKYNYNNNNYNKKLYYNINYIEQIPIPVPVYYGNFL 130
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.0 bits (52), Expect = 0.77
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 4 TINNTTFINMLNNVCRLTYNNYN*KFYQHIEHINTINLTIKMSF*N 141
+++N T N NN + YNN K Y +I +I I + + + + N
Sbjct: 84 SLSNKTIHN--NNNYKYNYNNNCKKLYYNINYIEQIPIPVPVYYGN 127
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 25.0 bits (52), Expect = 0.77
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 28 NMLNNVCRLTYNNYN*KFY--QHIEHINTINLTIKMSF*N 141
N NN + YNNYN K Y +I +I I + + + + N
Sbjct: 323 NYNNNNYKYNYNNYNKKLYYKNYIINIEQIPVPVPVYYGN 362
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 25.0 bits (52), Expect = 0.77
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 209 NTIHMYMVGR*MPYNFYFI 265
NT+ Y VG +P+NF FI
Sbjct: 306 NTLKYYEVGSNVPFNFKFI 324
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.8 bits (49), Expect = 1.8
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 28 NMLNNVCRLTYNN-YN*KFYQHIEHINTINLTI 123
N ++N+ NN YN K Y +I +I I + +
Sbjct: 88 NYISNISNYNNNNNYNKKLYYNINYIEQIPVPV 120
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.8 bits (49), Expect = 1.8
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 28 NMLNNVCRLTY-NNYN*KFYQHIEHINTINLTI 123
N ++N+ NNYN K Y +I +I I + +
Sbjct: 88 NYISNISNYNNDNNYNKKLYYNINYIEQIPVPV 120
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.8
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 4 TINNTTFINMLNNVCRLTYNNYN*KFYQHIEHINTINLTI 123
TI+N + NN NNYN K Y +I +I I + +
Sbjct: 88 TIHNNNYKYNYNNN-NYNNNNYNKKLYYNIINIEQIPVPV 126
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.8
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 4 TINNTTFINMLNNVCRLTYNNYN*KFYQHIEHINTINLTI 123
TI+N + NN NNYN K Y +I +I I + +
Sbjct: 88 TIHNNNYKYNYNNN-NYNNNNYNKKLYYNIINIEQIPVPV 126
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.8 bits (49), Expect = 1.8
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 28 NMLNNVCRLTYNN-YN*KFYQHIEHINTINLTI 123
N ++N+ NN YN K Y +I +I I + +
Sbjct: 326 NYISNISNYNNNNNYNKKLYYNINYIEQIPVPV 358
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.4 bits (48), Expect = 2.3
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 28 NMLNNVCRLTYNNYN*KFY 84
N NN YNNYN K Y
Sbjct: 328 NNYNNYNNNNYNNYNKKLY 346
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 3.1
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +1
Query: 10 NNTTFINMLNNVCRLTYNNYN*KFY--QHIEHINTINLTIKMSF*N 141
NN + NN NNYN K Y +I +I I + + + + N
Sbjct: 92 NNNNYKYNYNNKYNYNNNNYNKKLYYKNYIINIEQIPVPVPVYYGN 137
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +1
Query: 28 NMLNNVCRLTYNNYN*KFYQHIEHINTINLTIKMSF*N 141
++ NN YNNYN + + + N N K + N
Sbjct: 317 SLSNNYKYSNYNNYNNNYNNYNNYNNNYNNNYKKLYYN 354
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 58 YNNYN*KFYQHIEHINTINLTI 123
Y NYN K Y +I +I I + +
Sbjct: 329 YKNYNKKLYYNIINIEQIPVPV 350
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +1
Query: 25 INMLNNVCRLTYNNYN*KFYQHIE 96
+N+L N+ ++YN +FY I+
Sbjct: 359 LNILGNIIEGNADSYNTEFYGSID 382
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +1
Query: 25 INMLNNVCRLTYNNYN*KFYQHIE 96
+N+L N+ ++YN +FY I+
Sbjct: 359 LNILGNIIEGNADSYNTEFYGSID 382
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 212 TIHMYMVGR*MPYNFYFIK 268
T+ Y G P+NF FIK
Sbjct: 294 TMKYYDYGADFPFNFAFIK 312
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 61 NNYN*KFYQHIEHINTINLTI 123
NNYN K Y +I +I I + +
Sbjct: 326 NNYNKKLYYNIINIEQIPVPV 346
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +1
Query: 10 NNTTFINMLNNVCRLTYNN 66
NN + N NN C+ Y N
Sbjct: 339 NNNNYNNNYNNNCKKLYYN 357
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 212 TIHMYMVGR*MPYNFYFIK 268
T+ Y G P+NF FIK
Sbjct: 294 TMKYYDYGADFPFNFAFIK 312
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,633
Number of Sequences: 438
Number of extensions: 3660
Number of successful extensions: 27
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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