Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10p14
(320 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000E488F8 Cluster: PREDICTED: hypothetical protein;... 33 1.2
UniRef50_Q4XS29 Cluster: Putative uncharacterized protein; n=3; ... 33 1.6
UniRef50_Q23B19 Cluster: Putative uncharacterized protein; n=4; ... 32 2.1
UniRef50_Q22C52 Cluster: Putative uncharacterized protein; n=4; ... 32 2.1
UniRef50_A5K729 Cluster: Putative uncharacterized protein; n=1; ... 32 2.1
UniRef50_Q2UFD3 Cluster: Ankyrin repeat; n=1; Aspergillus oryzae... 32 2.8
UniRef50_Q54TG2 Cluster: Protein kinase, Atypical group; n=2; Di... 31 3.7
UniRef50_Q54MN9 Cluster: Putative uncharacterized protein; n=1; ... 31 4.9
UniRef50_Q4RX33 Cluster: Chromosome 11 SCAF14979, whole genome s... 31 6.5
UniRef50_Q67RJ2 Cluster: Putative uncharacterized protein; n=1; ... 31 6.5
UniRef50_A3WGW2 Cluster: Putative uncharacterized protein; n=1; ... 30 8.6
UniRef50_O97034 Cluster: PLC-gammaS; n=1; Ephydatia fluviatilis|... 30 8.6
UniRef50_A0D1M8 Cluster: Chromosome undetermined scaffold_34, wh... 30 8.6
>UniRef50_UPI0000E488F8 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 97
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 139 LFSKTSNTSRVKITLYLLSMLFQKPF-YRYMWSPWQLILFI*LN 267
L + T T+R +T+ L +LF KPF +Y+WS +I I LN
Sbjct: 16 LITVTVTTTRKTVTMILSFLLFSKPFTMQYVWSGMLVIFGIFLN 59
>UniRef50_Q4XS29 Cluster: Putative uncharacterized protein; n=3;
Plasmodium chabaudi|Rep: Putative uncharacterized protein
- Plasmodium chabaudi
Length = 1954
Score = 32.7 bits (71), Expect = 1.6
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +2
Query: 185 TSFPCFSKNLFIDICGRLGN*FYLFN*MKLLIFLTYIFNSHF 310
++F C SKN+ ID+C + Y N +K++ + + FN+ F
Sbjct: 1019 SNFYCISKNINIDMCAKKEKVIYFNNNIKMVKYNKFYFNNIF 1060
>UniRef50_Q23B19 Cluster: Putative uncharacterized protein; n=4;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 154
Score = 32.3 bits (70), Expect = 2.1
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +2
Query: 68 ACSDAQNLVELQKFPIFQYYLQNNYFLKPQIRLVLR*LYTSFPCFSKNLF 217
ACSD N + Q+ I + QNNYFL I +R + S CF K+ +
Sbjct: 81 ACSDYYNYTQ-QEISIEDFINQNNYFLNCFITENVREIANSEECFFKHFY 129
>UniRef50_Q22C52 Cluster: Putative uncharacterized protein; n=4;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 830
Score = 32.3 bits (70), Expect = 2.1
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -1
Query: 242 CQGDHIYL*KGFWKSMERRYRVILTRDVFEVLENNCSEDNTERLETSEVLPDFEHHCKQ 66
CQ IYL +G W+S Y I F+ C D +R+E +E D +CK+
Sbjct: 611 CQKTSIYLPRGLWRSKNNSYNYIERYGYFQ-----CVGD-IDRVEITEKFQDENRYCKE 663
>UniRef50_A5K729 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 4216
Score = 32.3 bits (70), Expect = 2.1
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +2
Query: 83 QNLVELQK--FPIFQYYLQNNYFLKPQIRLVLR*LYTSFPCFSKNLFIDICGRLGN*FYL 256
QN++ K F +F YY +F+K I L+L + + CF K +F+ + GN
Sbjct: 2395 QNVILSMKNNFYVFIYY----FFIKGYISLILLNTHRALKCF-KKVFVLVVFFFGNPINS 2449
Query: 257 FN*MKLLIFLTYI 295
N L+++TYI
Sbjct: 2450 LNSHPFLVYVTYI 2462
>UniRef50_Q2UFD3 Cluster: Ankyrin repeat; n=1; Aspergillus
oryzae|Rep: Ankyrin repeat - Aspergillus oryzae
Length = 1155
Score = 31.9 bits (69), Expect = 2.8
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 50 YHGNIIACSDAQNLVELQKFPIFQYYLQNNYFLKPQIR 163
YH N A + + LQ FP+ + ++NN F K +IR
Sbjct: 783 YHANAAAENGVTQMCFLQDFPLSSWIMKNNLFEKHEIR 820
>UniRef50_Q54TG2 Cluster: Protein kinase, Atypical group; n=2;
Dictyostelium discoideum|Rep: Protein kinase, Atypical
group - Dictyostelium discoideum AX4
Length = 2380
Score = 31.5 bits (68), Expect = 3.7
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +2
Query: 71 CSDAQNLVELQKFPIFQYYLQNN 139
CSD NL LQK +FQY L+N+
Sbjct: 2080 CSDYDNLTLLQKVEVFQYALENS 2102
>UniRef50_Q54MN9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 440
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -1
Query: 287 SKKSTISFN*INK-INCQGDHIYL*KGFWKSMERRYRVILTRDVFEVLENNCSEDN 123
S + +FN N I CQ ++ F++ ++++Y++ D+ + +NNC+ N
Sbjct: 95 SLEENFNFNSYNTLIGCQLIISFIISHFYQKIKKKYQIRKLMDIISINKNNCNNSN 150
>UniRef50_Q4RX33 Cluster: Chromosome 11 SCAF14979, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 11
SCAF14979, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 479
Score = 30.7 bits (66), Expect = 6.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 206 WKSMERRYRVILTRDVFEVLENNCSEDNTE 117
W+SM+ RYRV L + EV+E +E +E
Sbjct: 160 WQSMKYRYRVRLAKQQSEVVEKTAAEGESE 189
>UniRef50_Q67RJ2 Cluster: Putative uncharacterized protein; n=1;
Symbiobacterium thermophilum|Rep: Putative
uncharacterized protein - Symbiobacterium thermophilum
Length = 395
Score = 30.7 bits (66), Expect = 6.5
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1
Query: 206 WKSMERRYRVILTRDVFEVLENNCSEDNTERLETSEVLP 90
W ++ + R ILT+ +++ +E E N + T EVLP
Sbjct: 41 WSDLDPQLRAILTQHLYQAIEGAQGEVNFPCMYTGEVLP 79
>UniRef50_A3WGW2 Cluster: Putative uncharacterized protein; n=1;
Erythrobacter sp. NAP1|Rep: Putative uncharacterized
protein - Erythrobacter sp. NAP1
Length = 72
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -1
Query: 212 GFWKSMERRYRVILTRDVFEVLENNCSEDN-TERLETSEVLPD 87
GFW +MER + + + +EN SE + ERLET+E D
Sbjct: 22 GFWFNMERYQKDRVATVIVRSVENVVSESSEPERLETTETRQD 64
>UniRef50_O97034 Cluster: PLC-gammaS; n=1; Ephydatia
fluviatilis|Rep: PLC-gammaS - Ephydatia fluviatilis
Length = 1283
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -1
Query: 203 KSMERRYRVILTRDVFEVLENNCSEDNTERLETS-EVLPDFEHHCKQLYYH 54
K+ + Y V+ ++ + ED ++ ET+ E LP E H K+ ++H
Sbjct: 496 KNWAKHYFVLTEDKLYFTDQQEKDEDEADKTETNTETLPSTEQHLKEKWFH 546
>UniRef50_A0D1M8 Cluster: Chromosome undetermined scaffold_34, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_34,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 2890
Score = 30.3 bits (65), Expect = 8.6
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -1
Query: 161 VFEVLENNCSEDNTERLETSEVLPDFEHHCKQL 63
+F +L+ + + + +L E LPD++H+CK L
Sbjct: 643 IFVLLQTSVINNTSNQLYLFERLPDYQHYCKYL 675
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 263,093,420
Number of Sequences: 1657284
Number of extensions: 4107902
Number of successful extensions: 10768
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 10609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10767
length of database: 575,637,011
effective HSP length: 83
effective length of database: 438,082,439
effective search space used: 10075896097
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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