Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10p14
         (320 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    23   0.79 
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   1.0  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   1.0  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   4.2  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    20   5.5  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    19   9.7  

>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 0.79
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 173 LTRDVFEVLENNCSEDNTERLE 108
           L RD+ E L+N C++ N +  E
Sbjct: 60  LKRDIPEALQNECAKCNEKHKE 81


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +2

Query: 272 LLIFLTYIFNSHF 310
           LL+FLTY FN  F
Sbjct: 80  LLVFLTYFFNILF 92


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +2

Query: 272 LLIFLTYIFNSHF 310
           LL+FLTY FN  F
Sbjct: 76  LLVFLTYFFNILF 88


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 191 RRYRVILTRDVFEVLENNCSEDN 123
           RRYR   TR+    LE    ++N
Sbjct: 72  RRYRTAFTREQLARLEKEFFKEN 94


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +1

Query: 169 VKITLYLLSMLFQKPFYRYMWSP 237
           +++ LY+ + L    +  Y WSP
Sbjct: 133 LQLFLYIFTYLSVTCYVTYAWSP 155


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 19.4 bits (38), Expect = 9.7
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 219 IKRFLEKHGKEV 184
           ++RFLE H +E+
Sbjct: 153 LRRFLEDHTEEI 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,528
Number of Sequences: 336
Number of extensions: 1171
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6048897
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)